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The map label for this gene is ynfA [C]

Identifier: 93006324

GI number: 93006324

Start: 1842097

End: 1842429

Strand: Reverse

Name: ynfA [C]

Synonym: Pcryo_1498

Alternate gene names: 93006324

Gene position: 1842429-1842097 (Counterclockwise)

Preceding gene: 93006325

Following gene: 93006323

Centisome position: 60.21

GC content: 46.55

Gene sequence:

>333_bases
TTGTCTGAATTAAAAACAGTGGGGCTTTTTGCTCTTACTGCATTGGCTGAAATCGCAGGTTGTTATCTGCCTTATCTGTG
GCTACGAGAGGGTAAGTCAGTTTGGTTGCTCATACCTGGTGCCCTGAGTTTGATAGCTTTTGTATGGCTGCTGTCATTAC
ATCCCACTGCTGCCGGTAGGGTCTATGCCGCTTATGGCGGTGTTTATATTTCGATGGTGATTTTATGGTTGTGGACAGTG
AACGGGATACGTCCAACGACTTGGGATATTGTAGGTTCTGCTATTGCTTTACTGGGCATGGCAATTATTATGTTTGCGCC
GCGCAGTGCCTAG

Upstream 100 bases:

>100_bases
TGGCGGGGTACTAGACTGTGTGGTTGCAGGAGATAGAGTGCTTATCTCCGGTCATGCTGTGCATTATTTGACGGGATTTA
TTACGGTCGAGGAGTAAGTT

Downstream 100 bases:

>100_bases
CTTATGAGTCAAAGTGCGCAAATTAAAGCTTATTAATTCAAGATTTAGTAAATTCAATATACAGTCAAAATACCCTAAAA
ACGTTACGGTACTGCTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSELKTVGLFALTALAEIAGCYLPYLWLREGKSVWLLIPGALSLIAFVWLLSLHPTAAGRVYAAYGGVYISMVILWLWTV
NGIRPTTWDIVGSAIALLGMAIIMFAPRSA

Sequences:

>Translated_110_residues
MSELKTVGLFALTALAEIAGCYLPYLWLREGKSVWLLIPGALSLIAFVWLLSLHPTAAGRVYAAYGGVYISMVILWLWTV
NGIRPTTWDIVGSAIALLGMAIIMFAPRSA
>Mature_109_residues
SELKTVGLFALTALAEIAGCYLPYLWLREGKSVWLLIPGALSLIAFVWLLSLHPTAAGRVYAAYGGVYISMVILWLWTVN
GIRPTTWDIVGSAIALLGMAIIMFAPRSA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=101, Percent_Identity=56.4356435643564, Blast_Score=115, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1498_PSYCK (Q1QAM6)

Other databases:

- EMBL:   CP000323
- RefSeq:   YP_580761.1
- STRING:   Q1QAM6
- GeneID:   4034466
- GenomeReviews:   CP000323_GR
- KEGG:   pcr:Pcryo_1498
- NMPDR:   fig|335284.3.peg.1187
- eggNOG:   COG1742
- HOGENOM:   HBG313568
- OMA:   CLIGMAV
- PhylomeDB:   Q1QAM6
- ProtClustDB:   PRK02237
- BioCyc:   PCRY335284:PCRYO_1498-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11956; Mature: 11824

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1299bbf8)-; HASH(0x1334f6f8)-; HASH(0x1302b318)-; HASH(0x13372bec)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELKTVGLFALTALAEIAGCYLPYLWLREGKSVWLLIPGALSLIAFVWLLSLHPTAAGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCE
VYAAYGGVYISMVILWLWTVNGIRPTTWDIVGSAIALLGMAIIMFAPRSA
EHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure 
SELKTVGLFALTALAEIAGCYLPYLWLREGKSVWLLIPGALSLIAFVWLLSLHPTAAGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCE
VYAAYGGVYISMVILWLWTVNGIRPTTWDIVGSAIALLGMAIIMFAPRSA
EHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA