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The map label for this gene is kdsC [H]

Identifier: 93006317

GI number: 93006317

Start: 1834327

End: 1834893

Strand: Reverse

Name: kdsC [H]

Synonym: Pcryo_1491

Alternate gene names: 93006317

Gene position: 1834893-1834327 (Counterclockwise)

Preceding gene: 93006318

Following gene: 93006316

Centisome position: 59.97

GC content: 43.56

Gene sequence:

>567_bases
ATGCAAGACTTAATCAAGAAAGCCGGACAAGTGAAGTTATTGGTCATGGACGTTGATGGTATTTTATCAAATGGTCAAAT
TATCTATGATGCCAATGGTGTTGAGACCAAAGCGTTTTCTGTCTATGATGGTGTAGGCGTCAAGTCATTAGCCCGTTATG
GTATTTTGACTGCGATTATTACCGGTCGTAGCAGTCCTATGGTCGATAAACGCGCCACTGAAATTGGCGTAGATTATATT
GTCCAAGGACGTGATGATAAGTTAGTAGCATTAAACGAGCTGCTGGCAAGCCTTGATCCGGCGCTTAATATCACAGCTGC
TGATTGCGCTTATATGGGTGATGATTTGCCAGATATCAAAGCCATGCAAACAGTAGGATTTGCTGTTACTGTGCCAAATG
CCCAAGCAGAGGTTATCAATCGCAGTGATATGGTAACCACGCGAGCCGGCGGTACAGGCGCCGTACGTGAAGTATGTGAT
CTCATTTTAAAGGGTCATGGACATTACCAAGACTTTATCGCGCACTATACGCTTGATGAAGTAAAAAATCAGGATGACTT
ATCGTGA

Upstream 100 bases:

>100_bases
TGACCAGCGCCTAGAAGCCATTATTACAGTACATGATTTACTACAAGCTGGTGTAAAATAAGCGTTATATTAGAATATCT
ATTAATAAAAGAGATGACTG

Downstream 100 bases:

>100_bases
ATACTCGTGTTTTAATAGTCATTACCTTGATCATAGCTGGTCTTGCTGGTTGGTTTTTTAAGCAGCAAGGAGAAATCACG
CCGCCAGTCAATATTGAAAC

Product: phosphatase kdsC

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MQDLIKKAGQVKLLVMDVDGILSNGQIIYDANGVETKAFSVYDGVGVKSLARYGILTAIITGRSSPMVDKRATEIGVDYI
VQGRDDKLVALNELLASLDPALNITAADCAYMGDDLPDIKAMQTVGFAVTVPNAQAEVINRSDMVTTRAGGTGAVREVCD
LILKGHGHYQDFIAHYTLDEVKNQDDLS

Sequences:

>Translated_188_residues
MQDLIKKAGQVKLLVMDVDGILSNGQIIYDANGVETKAFSVYDGVGVKSLARYGILTAIITGRSSPMVDKRATEIGVDYI
VQGRDDKLVALNELLASLDPALNITAADCAYMGDDLPDIKAMQTVGFAVTVPNAQAEVINRSDMVTTRAGGTGAVREVCD
LILKGHGHYQDFIAHYTLDEVKNQDDLS
>Mature_188_residues
MQDLIKKAGQVKLLVMDVDGILSNGQIIYDANGVETKAFSVYDGVGVKSLARYGILTAIITGRSSPMVDKRATEIGVDYI
VQGRDDKLVALNELLASLDPALNITAADCAYMGDDLPDIKAMQTVGFAVTVPNAQAEVINRSDMVTTRAGGTGAVREVCD
LILKGHGHYQDFIAHYTLDEVKNQDDLS

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Escherichia coli, GI2367202, Length=182, Percent_Identity=43.956043956044, Blast_Score=140, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 20191; Mature: 20191

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLIKKAGQVKLLVMDVDGILSNGQIIYDANGVETKAFSVYDGVGVKSLARYGILTAII
CHHHHHHCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHEE
TGRSSPMVDKRATEIGVDYIVQGRDDKLVALNELLASLDPALNITAADCAYMGDDLPDIK
ECCCCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCHH
AMQTVGFAVTVPNAQAEVINRSDMVTTRAGGTGAVREVCDLILKGHGHYQDFIAHYTLDE
HHHHCCEEEECCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VKNQDDLS
HCCCCCCC
>Mature Secondary Structure
MQDLIKKAGQVKLLVMDVDGILSNGQIIYDANGVETKAFSVYDGVGVKSLARYGILTAII
CHHHHHHCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHEE
TGRSSPMVDKRATEIGVDYIVQGRDDKLVALNELLASLDPALNITAADCAYMGDDLPDIK
ECCCCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCHH
AMQTVGFAVTVPNAQAEVINRSDMVTTRAGGTGAVREVCDLILKGHGHYQDFIAHYTLDE
HHHHCCEEEECCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VKNQDDLS
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]