Click here to switch to the map view.

The map label for this gene is 93006309

Identifier: 93006309

GI number: 93006309

Start: 1824604

End: 1826151

Strand: Direct

Name: 93006309

Synonym: Pcryo_1483

Alternate gene names: NA

Gene position: 1824604-1826151 (Clockwise)

Preceding gene: 93006308

Following gene: 93006311

Centisome position: 59.63

GC content: 43.99

Gene sequence:

>1548_bases
ATGACTCAAAATACCATTTTAAAAGCCAAAAAGAATACTGCTCTGGTGTCATCAATAAAGCCGACATTTAAGCGACTACC
CTATTTGAGTATGGGGTTATTTTTGGGGCTGACTACTTTGACCATGACCGCGCAGGCTGATGGCATTACTGGTGAGGATT
ATCGTACTCAGGCATCTGCAGTTGATGTCAATGCGCCTATTGCTGCTTTGTCTAAGTTGACTAGCCTTGATAATGCCAAG
CCTTTAAAAGTCACCGTTCCAAAGATTCAACAGTTTAAGACCAAAGCGGGTGTGCCAGTACTTTTTGTACCGACGACGGC
ATTACCCATTGTCGACATCGATTTACGTTTTAATGCTGGTAGCGCGCGCGATGGCAGTATCAGTAGCACAGGTTTTGGTA
TCGCCAATATGACAGCGACCATGCTTGAACAAGGCTCAAAACGTTTAGATGAAAACGAATTTACTCGCGCGGTTGAAACC
TTAGGCATCAATCTAGGCAGCAGTGCCTATAAAGATATATTTACGGTCTCATTACGCAGTTTATCTGACGATAAACATCT
ATTACCTGCCATCGATTTGATGACCCAAATGCTCATCGAACCAAGTTTTAATGAACAAATTTTAGCCCGCAATAAAGCCC
GTTTATTGGTCGGCTTGCAGCAGCAAAAACAAGACCCAAACAGCCTTGCCAGCCTTGCTTTTGATAAAGCACTCTATGGC
GGCCATCCTTATGCTCATCCTTCTGTTGGCACCCTTGAAACAGTACCTAATATCACAAGACAACAGCTGATAGATTTTAA
AAATCGCTATCTGGTTGCCGCCAACGCTAGCCTTTCTATGACAGGTAATCTCACTTTAGCGCAAGCCAAAAAACTGGCAG
AAAACATCACGGCGGGTTTACCTACTGGTCAAGCAGCGCCTATTCTGCCTGAACCAAAACCATTGACGAAGTCTCAGCAT
ATTCATATTCCCTTTCCTAGCACTCAAACGACAGTACTGATGGGGCAACTTGGTGATAAGCGTGCAACGGATCCGCAAGC
GCAGCAAAAGCAAACCAGTTTTGCCGTTGGCAACGAGGTGCTCGCAGGGGGCGATTTTAATGCACGACTGATGACGGAAA
TCAGACAAAACCTTGGCTATACTTATGGTATTTCAGGCTCGATGAGTCCGATGCTGACACGTGGACCTTATCAGATAGGT
TTTTCGACTCGCAATGACAAGGCTCGTGCTGCGATTGATGCTAGCTTAGACGTTATTAATAACACGTTAAAAAATGGCAT
TACTAGTACTGAGATGAAGCTGACCACGGACAATTTAAAAAACAGCTTCCCAATGGGTTTTGCCAGTAACGCTGGTATTA
ATGGTTTGCTTGGTATGATGAATTTTTATCAGCTATCAACAAGCTATCTTAGCAACTATGTCAATCGTATCGAACAAGTC
AAATTAGCAGAGGTGAATCAGACCCTGCGTGATACCTTAAAGCCTGATGACTTCTTAATTGTGACCGTTGGTGAGGTCAA
TCCTTGGGATAAGAAGGCGGCTAAATAG

Upstream 100 bases:

>100_bases
CGTTAAGAAAAAATAAGGTTAATGTAATATCAGATGATGTTATCAAATATCATGACCAAAACTGCCAACGACTAAAAACG
CTATTAATAAGAAGAAAGCT

Downstream 100 bases:

>100_bases
TTAATTTATCTTTCATAGTGCTATAAAAAAGCTCAGCCCATTATATATACGGGCTGAGCTTTTTTTCTATCTTAGAATTA
TCGTCAGTAGCGGCAGGCAG

Product: peptidase M16-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MTQNTILKAKKNTALVSSIKPTFKRLPYLSMGLFLGLTTLTMTAQADGITGEDYRTQASAVDVNAPIAALSKLTSLDNAK
PLKVTVPKIQQFKTKAGVPVLFVPTTALPIVDIDLRFNAGSARDGSISSTGFGIANMTATMLEQGSKRLDENEFTRAVET
LGINLGSSAYKDIFTVSLRSLSDDKHLLPAIDLMTQMLIEPSFNEQILARNKARLLVGLQQQKQDPNSLASLAFDKALYG
GHPYAHPSVGTLETVPNITRQQLIDFKNRYLVAANASLSMTGNLTLAQAKKLAENITAGLPTGQAAPILPEPKPLTKSQH
IHIPFPSTQTTVLMGQLGDKRATDPQAQQKQTSFAVGNEVLAGGDFNARLMTEIRQNLGYTYGISGSMSPMLTRGPYQIG
FSTRNDKARAAIDASLDVINNTLKNGITSTEMKLTTDNLKNSFPMGFASNAGINGLLGMMNFYQLSTSYLSNYVNRIEQV
KLAEVNQTLRDTLKPDDFLIVTVGEVNPWDKKAAK

Sequences:

>Translated_515_residues
MTQNTILKAKKNTALVSSIKPTFKRLPYLSMGLFLGLTTLTMTAQADGITGEDYRTQASAVDVNAPIAALSKLTSLDNAK
PLKVTVPKIQQFKTKAGVPVLFVPTTALPIVDIDLRFNAGSARDGSISSTGFGIANMTATMLEQGSKRLDENEFTRAVET
LGINLGSSAYKDIFTVSLRSLSDDKHLLPAIDLMTQMLIEPSFNEQILARNKARLLVGLQQQKQDPNSLASLAFDKALYG
GHPYAHPSVGTLETVPNITRQQLIDFKNRYLVAANASLSMTGNLTLAQAKKLAENITAGLPTGQAAPILPEPKPLTKSQH
IHIPFPSTQTTVLMGQLGDKRATDPQAQQKQTSFAVGNEVLAGGDFNARLMTEIRQNLGYTYGISGSMSPMLTRGPYQIG
FSTRNDKARAAIDASLDVINNTLKNGITSTEMKLTTDNLKNSFPMGFASNAGINGLLGMMNFYQLSTSYLSNYVNRIEQV
KLAEVNQTLRDTLKPDDFLIVTVGEVNPWDKKAAK
>Mature_514_residues
TQNTILKAKKNTALVSSIKPTFKRLPYLSMGLFLGLTTLTMTAQADGITGEDYRTQASAVDVNAPIAALSKLTSLDNAKP
LKVTVPKIQQFKTKAGVPVLFVPTTALPIVDIDLRFNAGSARDGSISSTGFGIANMTATMLEQGSKRLDENEFTRAVETL
GINLGSSAYKDIFTVSLRSLSDDKHLLPAIDLMTQMLIEPSFNEQILARNKARLLVGLQQQKQDPNSLASLAFDKALYGG
HPYAHPSVGTLETVPNITRQQLIDFKNRYLVAANASLSMTGNLTLAQAKKLAENITAGLPTGQAAPILPEPKPLTKSQHI
HIPFPSTQTTVLMGQLGDKRATDPQAQQKQTSFAVGNEVLAGGDFNARLMTEIRQNLGYTYGISGSMSPMLTRGPYQIGF
STRNDKARAAIDASLDVINNTLKNGITSTEMKLTTDNLKNSFPMGFASNAGINGLLGMMNFYQLSTSYLSNYVNRIEQVK
LAEVNQTLRDTLKPDDFLIVTVGEVNPWDKKAAK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 55807; Mature: 55676

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNTILKAKKNTALVSSIKPTFKRLPYLSMGLFLGLTTLTMTAQADGITGEDYRTQASA
CCCCCEEEECCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCE
VDVNAPIAALSKLTSLDNAKPLKVTVPKIQQFKTKAGVPVLFVPTTALPIVDIDLRFNAG
EECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCEEEEECCCCCEEEEEEEEECCC
SARDGSISSTGFGIANMTATMLEQGSKRLDENEFTRAVETLGINLGSSAYKDIFTVSLRS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LSDDKHLLPAIDLMTQMLIEPSFNEQILARNKARLLVGLQQQKQDPNSLASLAFDKALYG
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHC
GHPYAHPSVGTLETVPNITRQQLIDFKNRYLVAANASLSMTGNLTLAQAKKLAENITAGL
CCCCCCCCCCCHHHCCCHHHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHHHHCCC
PTGQAAPILPEPKPLTKSQHIHIPFPSTQTTVLMGQLGDKRATDPQAQQKQTSFAVGNEV
CCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCEE
LAGGDFNARLMTEIRQNLGYTYGISGSMSPMLTRGPYQIGFSTRNDKARAAIDASLDVIN
EECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH
NTLKNGITSTEMKLTTDNLKNSFPMGFASNAGINGLLGMMNFYQLSTSYLSNYVNRIEQV
HHHHCCCCCCEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLAEVNQTLRDTLKPDDFLIVTVGEVNPWDKKAAK
HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCC
>Mature Secondary Structure 
TQNTILKAKKNTALVSSIKPTFKRLPYLSMGLFLGLTTLTMTAQADGITGEDYRTQASA
CCCCEEEECCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCE
VDVNAPIAALSKLTSLDNAKPLKVTVPKIQQFKTKAGVPVLFVPTTALPIVDIDLRFNAG
EECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCEEEEECCCCCEEEEEEEEECCC
SARDGSISSTGFGIANMTATMLEQGSKRLDENEFTRAVETLGINLGSSAYKDIFTVSLRS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LSDDKHLLPAIDLMTQMLIEPSFNEQILARNKARLLVGLQQQKQDPNSLASLAFDKALYG
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHC
GHPYAHPSVGTLETVPNITRQQLIDFKNRYLVAANASLSMTGNLTLAQAKKLAENITAGL
CCCCCCCCCCCHHHCCCHHHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHHHHCCC
PTGQAAPILPEPKPLTKSQHIHIPFPSTQTTVLMGQLGDKRATDPQAQQKQTSFAVGNEV
CCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCEE
LAGGDFNARLMTEIRQNLGYTYGISGSMSPMLTRGPYQIGFSTRNDKARAAIDASLDVIN
EECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH
NTLKNGITSTEMKLTTDNLKNSFPMGFASNAGINGLLGMMNFYQLSTSYLSNYVNRIEQV
HHHHCCCCCCEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLAEVNQTLRDTLKPDDFLIVTVGEVNPWDKKAAK
HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]