| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006265
Identifier: 93006265
GI number: 93006265
Start: 1770488
End: 1771309
Strand: Reverse
Name: 93006265
Synonym: Pcryo_1439
Alternate gene names: NA
Gene position: 1771309-1770488 (Counterclockwise)
Preceding gene: 93006266
Following gene: 93006263
Centisome position: 57.89
GC content: 42.09
Gene sequence:
>822_bases ATGACTCTATTATCAAAAAGTAATCTTTTGAATAAAAGTGTGACTTTAAGCCTGCTGACGGGTTTTATAGTTAGCACGGC TAGTCTTTGGATGCCTGTTACAAATGCCGCTGCTATTTATAAAGTCATTGATGAGAAAACGGGTCAAGTCACCTTTACCG ATCGCCCGCAGAACTACGAAAATAAACCGGGCAAGCAAATTAGTGAAACTTCTGTGATAACGGACACTCGCTCTACATCC AATAATGCTACTAATAACAGCACCGCAGTAGATAGTAATCCTATTGCACCTGCTAAGCCAATGGTCACTAGCAATGCAAC ACCGCCAGCGATGGCAAGTGCTTCAATCGCAATTCAAGCACCACGCGTCAGTTATCAATTGACGATGATTGAGCCTAGCG AAGAGCGTGCCTATCGTCGTCCGGCGCAAAGTATCGTGGTCACTCTACAAATTAAACCTGCACTACAAGTAAGAGATAGT GTGAGTATTACGCTTGATGGTAATGAGATGGCCCAAGGTTTAAGTGCCTCAATTTCTACGGTTGATATCCTACCGGGCTC TCATGTTATTCATGCTGTGATTAAAAACGCGAAAGGGCAGACGTTAAAGCAGATATCACGCACTATTTATGTGATTCAAA ATACGCAGACATTGCAAAATAATAAAAAAATTGCTGAGCAGCTTTTGGCTTATCAGCGCTTGCCTTGGCATCAAAAGGTG TTGTTAAAACTGCGTCAAGATGGCAAACAGCCTAATATGCAAACCTTTAATAAACCACAAGTAGACACACCTATGACTCT TGAGCAACCAGCTATAAAGTAG
Upstream 100 bases:
>100_bases GACAAAATTTCTGTGCAGACGATACTGCTTTAATATGAAAAGTAACGCATAATAGTTTCATCTGTATATTAATAATAAGT ATCTATTAGGCTGACTGACT
Downstream 100 bases:
>100_bases CCTATGATGAATAATGTTATCTAAAAAATAAAGGCAATCACTGATATCAGCGATTGCCTTTATTCATACTCATCTTTTCA TATAACTTTGACTGTATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MTLLSKSNLLNKSVTLSLLTGFIVSTASLWMPVTNAAAIYKVIDEKTGQVTFTDRPQNYENKPGKQISETSVITDTRSTS NNATNNSTAVDSNPIAPAKPMVTSNATPPAMASASIAIQAPRVSYQLTMIEPSEERAYRRPAQSIVVTLQIKPALQVRDS VSITLDGNEMAQGLSASISTVDILPGSHVIHAVIKNAKGQTLKQISRTIYVIQNTQTLQNNKKIAEQLLAYQRLPWHQKV LLKLRQDGKQPNMQTFNKPQVDTPMTLEQPAIK
Sequences:
>Translated_273_residues MTLLSKSNLLNKSVTLSLLTGFIVSTASLWMPVTNAAAIYKVIDEKTGQVTFTDRPQNYENKPGKQISETSVITDTRSTS NNATNNSTAVDSNPIAPAKPMVTSNATPPAMASASIAIQAPRVSYQLTMIEPSEERAYRRPAQSIVVTLQIKPALQVRDS VSITLDGNEMAQGLSASISTVDILPGSHVIHAVIKNAKGQTLKQISRTIYVIQNTQTLQNNKKIAEQLLAYQRLPWHQKV LLKLRQDGKQPNMQTFNKPQVDTPMTLEQPAIK >Mature_272_residues TLLSKSNLLNKSVTLSLLTGFIVSTASLWMPVTNAAAIYKVIDEKTGQVTFTDRPQNYENKPGKQISETSVITDTRSTSN NATNNSTAVDSNPIAPAKPMVTSNATPPAMASASIAIQAPRVSYQLTMIEPSEERAYRRPAQSIVVTLQIKPALQVRDSV SITLDGNEMAQGLSASISTVDILPGSHVIHAVIKNAKGQTLKQISRTIYVIQNTQTLQNNKKIAEQLLAYQRLPWHQKVL LKLRQDGKQPNMQTFNKPQVDTPMTLEQPAIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29892; Mature: 29760
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLSKSNLLNKSVTLSLLTGFIVSTASLWMPVTNAAAIYKVIDEKTGQVTFTDRPQNYE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCC NKPGKQISETSVITDTRSTSNNATNNSTAVDSNPIAPAKPMVTSNATPPAMASASIAIQA CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEC PRVSYQLTMIEPSEERAYRRPAQSIVVTLQIKPALQVRDSVSITLDGNEMAQGLSASIST CCEEEEEEEECCCHHHHHHCCCCEEEEEEEECCCEEECCCEEEEECCHHHHHHHHCCCEE VDILPGSHVIHAVIKNAKGQTLKQISRTIYVIQNTQTLQNNKKIAEQLLAYQRLPWHQKV EEECCCHHHHHHHHHCCCCHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHH LLKLRQDGKQPNMQTFNKPQVDTPMTLEQPAIK HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLLSKSNLLNKSVTLSLLTGFIVSTASLWMPVTNAAAIYKVIDEKTGQVTFTDRPQNYE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCC NKPGKQISETSVITDTRSTSNNATNNSTAVDSNPIAPAKPMVTSNATPPAMASASIAIQA CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEC PRVSYQLTMIEPSEERAYRRPAQSIVVTLQIKPALQVRDSVSITLDGNEMAQGLSASIST CCEEEEEEEECCCHHHHHHCCCCEEEEEEEECCCEEECCCEEEEECCHHHHHHHHCCCEE VDILPGSHVIHAVIKNAKGQTLKQISRTIYVIQNTQTLQNNKKIAEQLLAYQRLPWHQKV EEECCCHHHHHHHHHCCCCHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHH LLKLRQDGKQPNMQTFNKPQVDTPMTLEQPAIK HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA