| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is gloB [H]
Identifier: 93006258
GI number: 93006258
Start: 1760362
End: 1761141
Strand: Reverse
Name: gloB [H]
Synonym: Pcryo_1432
Alternate gene names: 93006258
Gene position: 1761141-1760362 (Counterclockwise)
Preceding gene: 93006259
Following gene: 93006257
Centisome position: 57.56
GC content: 43.72
Gene sequence:
>780_bases ATGAGTATTCGTATTCACCCAATTAAAGCATTCAATGACAACTATATTTGGACACTAATCAATGAGAGTAACAAGCAAGC CATTGTTATTGATCCGGGTCAAGCGGCACCAGTTGTTGCTTATTTAGAGGAAAATGGATTAGAGCTGACGTCTATCTGGA CGACTCATCATCATCATGACCATATCGGCGGCGTTGCAGAGTTACAAGAATCGTATCCGATGACGCATCTGGTTGCGCAT ACCGAGCATAATGTCGATGAAGATCAGACCATCAAAGATGGCAGTACAGTAAGCGCGTGGGGCTGCTCTGCACAAGTTTG GGATGTGTCAGGTCATACCGCTAGCCATATGGCTTATATATTAGATATCGATGGCCTTAAGCATTGCTTTTGTGGCGATA CCTTATTTAGTGCTGGATGCGGACGTGTGTTTACAGGAACGATTGAGCAGTTGCATGACAGCTTTAAGCGTCTAAATGGA CTGCCAGCTGAGACGCTGTTATATCCTGCACATGAATATACTGCTAGCAATCTACGTTTTGGGTTGTCGATTGAGCCTGA TAATGAAGCGATGCAGCAAGCTTTGGCACAAGCAGAAGACAAAACCGCACAAGGCATTCCGACGCTCCCTGTTACTTTAG GACATGAACGTGCGATCAATGTGTTTTTACGGACGCAAGAGCCGAGTGTGATTGCAGGTGTAAAAGCTCAGTTTAATATC GATGATGATAAATCTTTGACTGTATTTGCAGCTCTACGTGAGCTTAAAAATAACTTTTAA
Upstream 100 bases:
>100_bases AAAACAGTAAGTGACAGTGACAGTGACAATGACATTAAAAGTAATTTGAAAGAATTTAATAGACATTAGCAATAAAGATA ACCACTGGTAAGGATTTAGT
Downstream 100 bases:
>100_bases ATTCTAATCAATGCTTCGACTGACGCTTTGAGAGTTATTAGCTGCGCATTATTTCTATTGCCATATTTCTTACTATTAGG AAGCCGCCATTATGGGTCGT
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSIRIHPIKAFNDNYIWTLINESNKQAIVIDPGQAAPVVAYLEENGLELTSIWTTHHHHDHIGGVAELQESYPMTHLVAH TEHNVDEDQTIKDGSTVSAWGCSAQVWDVSGHTASHMAYILDIDGLKHCFCGDTLFSAGCGRVFTGTIEQLHDSFKRLNG LPAETLLYPAHEYTASNLRFGLSIEPDNEAMQQALAQAEDKTAQGIPTLPVTLGHERAINVFLRTQEPSVIAGVKAQFNI DDDKSLTVFAALRELKNNF
Sequences:
>Translated_259_residues MSIRIHPIKAFNDNYIWTLINESNKQAIVIDPGQAAPVVAYLEENGLELTSIWTTHHHHDHIGGVAELQESYPMTHLVAH TEHNVDEDQTIKDGSTVSAWGCSAQVWDVSGHTASHMAYILDIDGLKHCFCGDTLFSAGCGRVFTGTIEQLHDSFKRLNG LPAETLLYPAHEYTASNLRFGLSIEPDNEAMQQALAQAEDKTAQGIPTLPVTLGHERAINVFLRTQEPSVIAGVKAQFNI DDDKSLTVFAALRELKNNF >Mature_258_residues SIRIHPIKAFNDNYIWTLINESNKQAIVIDPGQAAPVVAYLEENGLELTSIWTTHHHHDHIGGVAELQESYPMTHLVAHT EHNVDEDQTIKDGSTVSAWGCSAQVWDVSGHTASHMAYILDIDGLKHCFCGDTLFSAGCGRVFTGTIEQLHDSFKRLNGL PAETLLYPAHEYTASNLRFGLSIEPDNEAMQQALAQAEDKTAQGIPTLPVTLGHERAINVFLRTQEPSVIAGVKAQFNID DDKSLTVFAALRELKNNF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538322, Length=268, Percent_Identity=31.7164179104478, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI94538320, Length=261, Percent_Identity=31.8007662835249, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI14150041, Length=233, Percent_Identity=32.618025751073, Blast_Score=138, Evalue=5e-33, Organism=Homo sapiens, GI116642887, Length=262, Percent_Identity=32.0610687022901, Blast_Score=130, Evalue=8e-31, Organism=Homo sapiens, GI21703352, Length=263, Percent_Identity=31.5589353612167, Blast_Score=130, Evalue=9e-31, Organism=Homo sapiens, GI46361987, Length=204, Percent_Identity=30.3921568627451, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI41327741, Length=165, Percent_Identity=30.3030303030303, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1786406, Length=258, Percent_Identity=39.5348837209302, Blast_Score=171, Evalue=4e-44, Organism=Escherichia coli, GI1787158, Length=197, Percent_Identity=28.9340101522843, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17536925, Length=254, Percent_Identity=31.8897637795276, Blast_Score=138, Evalue=2e-33, Organism=Drosophila melanogaster, GI21356335, Length=235, Percent_Identity=33.1914893617021, Blast_Score=143, Evalue=1e-34, Organism=Drosophila melanogaster, GI24667703, Length=235, Percent_Identity=33.1914893617021, Blast_Score=143, Evalue=1e-34, Organism=Drosophila melanogaster, GI24667711, Length=235, Percent_Identity=33.1914893617021, Blast_Score=142, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28584; Mature: 28453
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRIHPIKAFNDNYIWTLINESNKQAIVIDPGQAAPVVAYLEENGLELTSIWTTHHHHD CCEEEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCC HIGGVAELQESYPMTHLVAHTEHNVDEDQTIKDGSTVSAWGCSAQVWDVSGHTASHMAYI CCCCHHHHHHHCCCEEEEEECCCCCCCCCEECCCCEEEECCCCEEEEECCCCCHHHEEEE LDIDGLKHCFCGDTLFSAGCGRVFTGTIEQLHDSFKRLNGLPAETLLYPAHEYTASNLRF EECCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEECCHHCCCCCEEE GLSIEPDNEAMQQALAQAEDKTAQGIPTLPVTLGHERAINVFLRTQEPSVIAGVKAQFNI EEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEEEECCCCEEEEEEEEECC DDDKSLTVFAALRELKNNF CCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SIRIHPIKAFNDNYIWTLINESNKQAIVIDPGQAAPVVAYLEENGLELTSIWTTHHHHD CEEEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCC HIGGVAELQESYPMTHLVAHTEHNVDEDQTIKDGSTVSAWGCSAQVWDVSGHTASHMAYI CCCCHHHHHHHCCCEEEEEECCCCCCCCCEECCCCEEEECCCCEEEEECCCCCHHHEEEE LDIDGLKHCFCGDTLFSAGCGRVFTGTIEQLHDSFKRLNGLPAETLLYPAHEYTASNLRF EECCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEECCHHCCCCCEEE GLSIEPDNEAMQQALAQAEDKTAQGIPTLPVTLGHERAINVFLRTQEPSVIAGVKAQFNI EEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEEEECCCCEEEEEEEEECC DDDKSLTVFAALRELKNNF CCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA