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The map label for this gene is yejB [H]

Identifier: 93006257

GI number: 93006257

Start: 1759203

End: 1760270

Strand: Reverse

Name: yejB [H]

Synonym: Pcryo_1431

Alternate gene names: 93006257

Gene position: 1760270-1759203 (Counterclockwise)

Preceding gene: 93006258

Following gene: 93006256

Centisome position: 57.53

GC content: 44.48

Gene sequence:

>1068_bases
ATGGGTCGTTATATCTTAAAAAGGTTGTTATTGATATTACCGACGCTATTTTTGATATTGCTGGCGAATTTTGTCATTGT
ACAAGCAGCGCCCGGCGGTCCTGTTGAGCAGCAATTCGCCATGATTGAGCAAGGTGCAAAAGACAATGCCTTGGGTGGTA
ATATTGGTGCGGGTAGTTCAGGTAATAATAGTACGTATCAAGGCACGCGCGGCCTATCAGAAGAGATGGTGGCGGCGATT
AATGCACAATATGGCTTCGACAAATCCGCGCCTGAGCGCTTTTGGCTGATGCTAAAAAATTATGCCCAGCTGGATTTTGG
GGAGTCGTTTTTTAAAGGGCAATCGGTCACTGATTTGATTATCGAGAAGCTACCCGTTTCAATCTCGCTTGGGCTTTGGA
GCACGCTGCTGATTTATATGATAGCGATTCCACTAGGGGTCTATAAAGCCATGCATCATGGCTCAGGGATTGATAAAGTC
ACAGCCATGCTACTAGCTATCGGCCATGCGATTCCCGTTTTCGTATTTGCCGTTATATTACTGGTGTTTTTTGCAGGTGG
TAGCTACTGGAATATCTTTCCACTGCAAGGCTTGACCTCTGAGAATTTTGATCAATTGAGCGTGCTGGGTAAAATCAAAG
ATTACTTTTGGCATTTGGCGCTACCGCTGCTAGCAAGTACGGTTGGTGGTTTCGCTGGCTTGACCTATTTGACCAAGTTT
AGCTTTTTAGAAGAGCTCGGCAAGCAATATGTGCTTACTGCTCGTGCCAAAGGCTTGGCTGAGCGTCAAGTGCTATACGG
ACATGTGTTTCGTAATGCCATGCTGATTATTATCGCCGGTATTCCAGCGGCTATCGTTGGCATTTTCTTTGCTGGTAATT
TCCTTATTGAGATTATCTTTAAGCTTGATGGTTTGGGCTTGTTAGGTTTCGAAGCCATTCAGCAGCGTGATTATCCCGTG
ATATTTGGCACGCTGTTTATTTTTACCTTGGTCGGACTGTTATTACAGTTAATCAGTGATTTAAGTTATCACTTAATTGA
TCCCCGTATCGATTTTGAGGGGCGCTAA

Upstream 100 bases:

>100_bases
AACTTTTAAATTCTAATCAATGCTTCGACTGACGCTTTGAGAGTTATTAGCTGCGCATTATTTCTATTGCCATATTTCTT
ACTATTAGGAAGCCGCCATT

Downstream 100 bases:

>100_bases
TGTCAAGTCATCCATTACCTTCAACGCACTCAAGCGCATCTGCTATTGCTATAGAAAAAAAACGTCGCCTAAATCCTATC
TGGCAGGCAAGACTTAATCG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MGRYILKRLLLILPTLFLILLANFVIVQAAPGGPVEQQFAMIEQGAKDNALGGNIGAGSSGNNSTYQGTRGLSEEMVAAI
NAQYGFDKSAPERFWLMLKNYAQLDFGESFFKGQSVTDLIIEKLPVSISLGLWSTLLIYMIAIPLGVYKAMHHGSGIDKV
TAMLLAIGHAIPVFVFAVILLVFFAGGSYWNIFPLQGLTSENFDQLSVLGKIKDYFWHLALPLLASTVGGFAGLTYLTKF
SFLEELGKQYVLTARAKGLAERQVLYGHVFRNAMLIIIAGIPAAIVGIFFAGNFLIEIIFKLDGLGLLGFEAIQQRDYPV
IFGTLFIFTLVGLLLQLISDLSYHLIDPRIDFEGR

Sequences:

>Translated_355_residues
MGRYILKRLLLILPTLFLILLANFVIVQAAPGGPVEQQFAMIEQGAKDNALGGNIGAGSSGNNSTYQGTRGLSEEMVAAI
NAQYGFDKSAPERFWLMLKNYAQLDFGESFFKGQSVTDLIIEKLPVSISLGLWSTLLIYMIAIPLGVYKAMHHGSGIDKV
TAMLLAIGHAIPVFVFAVILLVFFAGGSYWNIFPLQGLTSENFDQLSVLGKIKDYFWHLALPLLASTVGGFAGLTYLTKF
SFLEELGKQYVLTARAKGLAERQVLYGHVFRNAMLIIIAGIPAAIVGIFFAGNFLIEIIFKLDGLGLLGFEAIQQRDYPV
IFGTLFIFTLVGLLLQLISDLSYHLIDPRIDFEGR
>Mature_354_residues
GRYILKRLLLILPTLFLILLANFVIVQAAPGGPVEQQFAMIEQGAKDNALGGNIGAGSSGNNSTYQGTRGLSEEMVAAIN
AQYGFDKSAPERFWLMLKNYAQLDFGESFFKGQSVTDLIIEKLPVSISLGLWSTLLIYMIAIPLGVYKAMHHGSGIDKVT
AMLLAIGHAIPVFVFAVILLVFFAGGSYWNIFPLQGLTSENFDQLSVLGKIKDYFWHLALPLLASTVGGFAGLTYLTKFS
FLEELGKQYVLTARAKGLAERQVLYGHVFRNAMLIIIAGIPAAIVGIFFAGNFLIEIIFKLDGLGLLGFEAIQQRDYPVI
FGTLFIFTLVGLLLQLISDLSYHLIDPRIDFEGR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=368, Percent_Identity=56.25, Blast_Score=417, Evalue=1e-118,
Organism=Escherichia coli, GI1789965, Length=369, Percent_Identity=28.7262872628726, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1787497, Length=353, Percent_Identity=28.8951841359773, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1787053, Length=353, Percent_Identity=26.0623229461756, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1789888, Length=352, Percent_Identity=28.125, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787550, Length=266, Percent_Identity=22.9323308270677, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787761, Length=292, Percent_Identity=26.027397260274, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38959; Mature: 38828

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRYILKRLLLILPTLFLILLANFVIVQAAPGGPVEQQFAMIEQGAKDNALGGNIGAGSS
CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GNNSTYQGTRGLSEEMVAAINAQYGFDKSAPERFWLMLKNYAQLDFGESFFKGQSVTDLI
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH
IEKLPVSISLGLWSTLLIYMIAIPLGVYKAMHHGSGIDKVTAMLLAIGHAIPVFVFAVIL
HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVFFAGGSYWNIFPLQGLTSENFDQLSVLGKIKDYFWHLALPLLASTVGGFAGLTYLTKF
HHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLEELGKQYVLTARAKGLAERQVLYGHVFRNAMLIIIAGIPAAIVGIFFAGNFLIEIIF
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHH
KLDGLGLLGFEAIQQRDYPVIFGTLFIFTLVGLLLQLISDLSYHLIDPRIDFEGR
HHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GRYILKRLLLILPTLFLILLANFVIVQAAPGGPVEQQFAMIEQGAKDNALGGNIGAGSS
CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GNNSTYQGTRGLSEEMVAAINAQYGFDKSAPERFWLMLKNYAQLDFGESFFKGQSVTDLI
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH
IEKLPVSISLGLWSTLLIYMIAIPLGVYKAMHHGSGIDKVTAMLLAIGHAIPVFVFAVIL
HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVFFAGGSYWNIFPLQGLTSENFDQLSVLGKIKDYFWHLALPLLASTVGGFAGLTYLTKF
HHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLEELGKQYVLTARAKGLAERQVLYGHVFRNAMLIIIAGIPAAIVGIFFAGNFLIEIIF
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHH
KLDGLGLLGFEAIQQRDYPVIFGTLFIFTLVGLLLQLISDLSYHLIDPRIDFEGR
HHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]