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The map label for this gene is ycaP [H]

Identifier: 93006241

GI number: 93006241

Start: 1737208

End: 1737891

Strand: Reverse

Name: ycaP [H]

Synonym: Pcryo_1415

Alternate gene names: 93006241

Gene position: 1737891-1737208 (Counterclockwise)

Preceding gene: 93006244

Following gene: 93006238

Centisome position: 56.8

GC content: 45.47

Gene sequence:

>684_bases
ATGGACTGGGCAAGTATTTTCATTCATGATACAACATGGACATTTGCTGCTGAGATACTGATACGTGTCATTGTCATGTT
TGTGCTCATCATTTCATTTTTGCGCTTTACCGGCAAGCGCGGCGTTCGACAGCTCTCCATCTTTGAGCTGACCATCATCT
TGTCACTGGGATCTATCGCAGGTGACCCGATGTTTACCGAGGATTTACCGATTATTCAAGCGGTACTAATCATGAGTACG
GTAATACTGCTTTACCGGCTCTGTACATGGGGCATGATGAAATATCAGCCTTTTGAAGATTTGTTAGAAGGTAAGTCCTT
ATATATCGTCGAAGATGGCATGCTGGTACACGACAAAATAGCAGAAGGGAAAATGTCACATGATGAGTTTTTTGCGGAAA
TGCGCCAACAGGGGGTCGAGCATTTAGGTCAGGTTCGTACCGGTTTGCTTGAAACCGATGGCAATTTTAGCCTGTTATTA
TACCCACCTGATGACACCGGCTATGGTCTGCCACTTTTCCCGAAACAGTATCAGGCGGTTGAGCAGGTAGAATCACAAAC
GTATTACGCTTGTATGTACTGCGGACACGTGGACTTTATCTCTGATGCCAACCAGCAATGCGAGCGCTGTGAAGATAACT
GCCGGAATTGGGCAAAAGCTTTAAACACTAAGCTCGTGAGGTAG

Upstream 100 bases:

>100_bases
TAATTCCTACAATTAATAAGTAAGTTTTTGCATAAAATAGAGCAGCTTTAAATAGAGTGGTTTTGATGCCATCATTAAAA
ATAATAACAAGGAAAAAAAT

Downstream 100 bases:

>100_bases
TAATGGGTGCAAGGTTTGACAGTGTTTATTAAATAGCCTAAGCATTATTATTTAATTCAGATGCGTCTAGCAATTTTATC
ACTTGTTGAACCCGCACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MDWASIFIHDTTWTFAAEILIRVIVMFVLIISFLRFTGKRGVRQLSIFELTIILSLGSIAGDPMFTEDLPIIQAVLIMST
VILLYRLCTWGMMKYQPFEDLLEGKSLYIVEDGMLVHDKIAEGKMSHDEFFAEMRQQGVEHLGQVRTGLLETDGNFSLLL
YPPDDTGYGLPLFPKQYQAVEQVESQTYYACMYCGHVDFISDANQQCERCEDNCRNWAKALNTKLVR

Sequences:

>Translated_227_residues
MDWASIFIHDTTWTFAAEILIRVIVMFVLIISFLRFTGKRGVRQLSIFELTIILSLGSIAGDPMFTEDLPIIQAVLIMST
VILLYRLCTWGMMKYQPFEDLLEGKSLYIVEDGMLVHDKIAEGKMSHDEFFAEMRQQGVEHLGQVRTGLLETDGNFSLLL
YPPDDTGYGLPLFPKQYQAVEQVESQTYYACMYCGHVDFISDANQQCERCEDNCRNWAKALNTKLVR
>Mature_227_residues
MDWASIFIHDTTWTFAAEILIRVIVMFVLIISFLRFTGKRGVRQLSIFELTIILSLGSIAGDPMFTEDLPIIQAVLIMST
VILLYRLCTWGMMKYQPFEDLLEGKSLYIVEDGMLVHDKIAEGKMSHDEFFAEMRQQGVEHLGQVRTGLLETDGNFSLLL
YPPDDTGYGLPLFPKQYQAVEQVESQTYYACMYCGHVDFISDANQQCERCEDNCRNWAKALNTKLVR

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=216, Percent_Identity=41.2037037037037, Blast_Score=168, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 26033; Mature: 26033

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWASIFIHDTTWTFAAEILIRVIVMFVLIISFLRFTGKRGVRQLSIFELTIILSLGSIA
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
GDPMFTEDLPIIQAVLIMSTVILLYRLCTWGMMKYQPFEDLLEGKSLYIVEDGMLVHDKI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCEEEEHHH
AEGKMSHDEFFAEMRQQGVEHLGQVRTGLLETDGNFSLLLYPPDDTGYGLPLFPKQYQAV
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCHHHHHH
EQVESQTYYACMYCGHVDFISDANQQCERCEDNCRNWAKALNTKLVR
HHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDWASIFIHDTTWTFAAEILIRVIVMFVLIISFLRFTGKRGVRQLSIFELTIILSLGSIA
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
GDPMFTEDLPIIQAVLIMSTVILLYRLCTWGMMKYQPFEDLLEGKSLYIVEDGMLVHDKI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCEEEEHHH
AEGKMSHDEFFAEMRQQGVEHLGQVRTGLLETDGNFSLLLYPPDDTGYGLPLFPKQYQAV
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCHHHHHH
EQVESQTYYACMYCGHVDFISDANQQCERCEDNCRNWAKALNTKLVR
HHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]