BacMap

Definition	Psychrobacter cryohalolentis K5 chromosome, complete genome.
Accession	NC_007969
Length	3,059,876

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The map label for this gene is rhlE [H]

Identifier: 93006205

GI number: 93006205

Start: 1687345

End: 1689003

Strand: Reverse

Name: rhlE [H]

Synonym: Pcryo_1379

Alternate gene names: 93006205

Gene position: 1689003-1687345 (Counterclockwise)

Preceding gene: 93006206

Following gene: 93006204

Centisome position: 55.2

GC content: 47.86

Gene sequence:

>1659_bases
ATGACTGACATCTTATCTGCAATCGCTGCTGAAAACGGCATTATCGAAGACACCACTCAAAATACAACTACTAATGAAGC
AGCTTCTACTGACGCTTCTGACGAAAATCAAGTTACTTTTACTGATCTTGGCATCGCTAAGCCTATTCTAACTGCACTTG
ATCGCAGTGGTTATACCAACCCAACGCCTATCCAAGCACAAGCGATTCCTTTTGCTCTAGCAGGTCGTGACTTATTATTG
TCAGCGCAAACAGGTAGTGGTAAAACTGCAGCATTCGTTATCCCAGTACTTGATCGTTTGAGCCGCGCTACTAGCTTTGA
CAAACTAACCAAAGCACTTATTCTAACGCCAACGCGTGAACTTGCTCAGCAAGTACATGACAGCGTACGCACTTATTCTA
AAGATATGCGCGGCCTGTTCTGTGTACCATTAGTTGGCGGCGCACCATACAACGGTCAGATCACTGCTTTGAAAAAAGGC
GTTCAAGTTATCGTTGCGACCCCAGGTCGTTTACTTGACCATATAAATGCTGGTCGCGTTGACTTATCAAGCCTAGAAAT
CTTGGTACTTGATGAAGCTGACCGTATGCTAGACATGGGTTTTGCTGATGACATCAGTGACATCTTGCGTGCTGCTCCTA
CTGATCGTCAAACTATCATGTGTTCTGCAACTTGGGATGGCCCAGTAGGTAAAATTGCTGCCAGCTTCACTAAGAACCCT
GAGCGTGTCTCAATCAAAGTAGAATCTGCACACATCGAAGAAAAAGTGTACTACTGTGATGATTTTGATCATAAAAACCG
TTTGCTTGATAAAATCGTTTGCCAGCAAGATATGGAACAGATCATTATCTTTGCTGCTACCAAACGTAGCACTGAAAAAC
TGGCCAAACAGCTACAAGAAGCGGGTCATAAAGCCAGCTTCCTACATGGTGATTTGCCACAAAGCAAGCGTAACCGTATC
GTTCAAGACTTGCGTAATGGTAAAGTTAAAATCCTAGTAGCGACTGACGTTGCCGCTCGTGGTCTAGACATCCCAGCAAT
TTCGCACGTAATCAACTATGATCTTCCACGTCAAACTGAAGATTACGTCCATCGTATCGGTCGTTGTGGTCGTGCTGGTC
GTACTGGTATCGCTATCAGCTTATGTAGCATGGATGACCGTCCACAGCTAAACGCTATCAATCGTTATTTAGATCGCAAA
ATGGAAGTATGTATCATCGAAGGCATGGAGCCTAAGAAGACTTATGTACCTAGCGAAAACAAAGGTAATGGTCGTGGTCG
CGGCCGTGGTCGTTCAAACGGCGGCGGTAATGGTCAAGGTCGTGGTCGCGCGGGTGGTGGCTATCAAGGTAACCCTGCTA
ATGCTCGTGGTCGCTCAAGTGACAGCGCTCCAACCGGTCAACGCGCAAGCAATGACAGCGGTTATCAAGGTAAGCCACGT
GACGCATCTGGCAAACCAAATGAGCGTTCAGGTGGCAAGCCGTATCAAGGCAAGCGTACTGGTGCTCCTAGTCGTGGCGA
TAGCACTGGCGTTCCACGTGGCGAGCGTGCTGCAACGGGTCGTGGTCGTCCAAGTGGCAGCCAAGGTCGCCCAGCTGGTC
GTTCAGACAGCCGTGGTCAAGGTCGTCCAACTGGCGGCAACCGTGGTAACAACTCGTAA

Upstream 100 bases:

>100_bases
TTTTGATAATCAGATTATATGGGTAGCGTGGTGAACGGTTATCAGTGGTATGCATCAAGTTTGCTGAATTTACAGCAGCT
TATACTTACCAAGGATACTC

Downstream 100 bases:

>100_bases
TAGCCTTATTTTAAACGATTAATGATTTTTGATAATCATGCCTTAATTGTCTAAAGATATTGCAAAAAAAGCCGGATACT
TGTTATCTGGCTTTTTTGTG

Product: DEAD/DEAH box helicase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MTDILSAIAAENGIIEDTTQNTTTNEAASTDASDENQVTFTDLGIAKPILTALDRSGYTNPTPIQAQAIPFALAGRDLLL
SAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQITALKKG
VQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAPTDRQTIMCSATWDGPVGKIAASFTKNP
ERVSIKVESAHIEEKVYYCDDFDHKNRLLDKIVCQQDMEQIIIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRI
VQDLRNGKVKILVATDVAARGLDIPAISHVINYDLPRQTEDYVHRIGRCGRAGRTGIAISLCSMDDRPQLNAINRYLDRK
MEVCIIEGMEPKKTYVPSENKGNGRGRGRGRSNGGGNGQGRGRAGGGYQGNPANARGRSSDSAPTGQRASNDSGYQGKPR
DASGKPNERSGGKPYQGKRTGAPSRGDSTGVPRGERAATGRGRPSGSQGRPAGRSDSRGQGRPTGGNRGNNS

Sequences:

>Translated_552_residues
MTDILSAIAAENGIIEDTTQNTTTNEAASTDASDENQVTFTDLGIAKPILTALDRSGYTNPTPIQAQAIPFALAGRDLLL
SAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQITALKKG
VQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAPTDRQTIMCSATWDGPVGKIAASFTKNP
ERVSIKVESAHIEEKVYYCDDFDHKNRLLDKIVCQQDMEQIIIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRI
VQDLRNGKVKILVATDVAARGLDIPAISHVINYDLPRQTEDYVHRIGRCGRAGRTGIAISLCSMDDRPQLNAINRYLDRK
MEVCIIEGMEPKKTYVPSENKGNGRGRGRGRSNGGGNGQGRGRAGGGYQGNPANARGRSSDSAPTGQRASNDSGYQGKPR
DASGKPNERSGGKPYQGKRTGAPSRGDSTGVPRGERAATGRGRPSGSQGRPAGRSDSRGQGRPTGGNRGNNS
>Mature_551_residues
TDILSAIAAENGIIEDTTQNTTTNEAASTDASDENQVTFTDLGIAKPILTALDRSGYTNPTPIQAQAIPFALAGRDLLLS
AQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQITALKKGV
QVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAPTDRQTIMCSATWDGPVGKIAASFTKNPE
RVSIKVESAHIEEKVYYCDDFDHKNRLLDKIVCQQDMEQIIIFAATKRSTEKLAKQLQEAGHKASFLHGDLPQSKRNRIV
QDLRNGKVKILVATDVAARGLDIPAISHVINYDLPRQTEDYVHRIGRCGRAGRTGIAISLCSMDDRPQLNAINRYLDRKM
EVCIIEGMEPKKTYVPSENKGNGRGRGRGRSNGGGNGQGRGRAGGGYQGNPANARGRSSDSAPTGQRASNDSGYQGKPRD
ASGKPNERSGGKPYQGKRTGAPSRGDSTGVPRGERAATGRGRPSGSQGRPAGRSDSRGQGRPTGGNRGNNS

Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI45446747, Length=355, Percent_Identity=39.1549295774648, Blast_Score=264, Evalue=1e-70,
Organism=Homo sapiens, GI45446743, Length=355, Percent_Identity=39.1549295774648, Blast_Score=264, Evalue=1e-70,
Organism=Homo sapiens, GI20149629, Length=438, Percent_Identity=35.8447488584475, Blast_Score=258, Evalue=1e-68,
Organism=Homo sapiens, GI4758138, Length=365, Percent_Identity=37.8082191780822, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI148613856, Length=377, Percent_Identity=38.1962864721485, Blast_Score=256, Evalue=6e-68,
Organism=Homo sapiens, GI38201710, Length=377, Percent_Identity=38.1962864721485, Blast_Score=256, Evalue=6e-68,
Organism=Homo sapiens, GI301171467, Length=426, Percent_Identity=37.0892018779343, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI41327771, Length=384, Percent_Identity=38.28125, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI169881239, Length=428, Percent_Identity=36.9158878504673, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI13514809, Length=428, Percent_Identity=36.9158878504673, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI222352149, Length=369, Percent_Identity=38.7533875338753, Blast_Score=253, Evalue=4e-67,
Organism=Homo sapiens, GI224593278, Length=374, Percent_Identity=37.4331550802139, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI164664518, Length=359, Percent_Identity=36.7688022284123, Blast_Score=245, Evalue=7e-65,
Organism=Homo sapiens, GI87196351, Length=367, Percent_Identity=38.6920980926431, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI41327773, Length=355, Percent_Identity=40, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI301171475, Length=367, Percent_Identity=38.6920980926431, Blast_Score=244, Evalue=2e-64,
Organism=Homo sapiens, GI55749865, Length=358, Percent_Identity=37.9888268156425, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI216548263, Length=367, Percent_Identity=37.6021798365123, Blast_Score=238, Evalue=9e-63,
Organism=Homo sapiens, GI13518015, Length=367, Percent_Identity=37.6021798365123, Blast_Score=238, Evalue=9e-63,
Organism=Homo sapiens, GI262231852, Length=367, Percent_Identity=37.6021798365123, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI262118318, Length=367, Percent_Identity=37.6021798365123, Blast_Score=235, Evalue=7e-62,
Organism=Homo sapiens, GI188035877, Length=335, Percent_Identity=39.7014925373134, Blast_Score=235, Evalue=9e-62,
Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=36.1185983827493, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=38.268156424581, Blast_Score=230, Evalue=3e-60,
Organism=Homo sapiens, GI50659095, Length=401, Percent_Identity=34.9127182044888, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI41327776, Length=436, Percent_Identity=33.256880733945, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI13129006, Length=419, Percent_Identity=35.3221957040573, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI164419743, Length=371, Percent_Identity=35.0404312668464, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI51094101, Length=371, Percent_Identity=35.0404312668464, Blast_Score=220, Evalue=3e-57,
Organism=Homo sapiens, GI31542656, Length=382, Percent_Identity=35.6020942408377, Blast_Score=207, Evalue=3e-53,
Organism=Homo sapiens, GI4503529, Length=376, Percent_Identity=33.5106382978723, Blast_Score=206, Evalue=7e-53,
Organism=Homo sapiens, GI83700235, Length=376, Percent_Identity=33.7765957446808, Blast_Score=202, Evalue=9e-52,
Organism=Homo sapiens, GI164419732, Length=371, Percent_Identity=33.9622641509434, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI13514831, Length=358, Percent_Identity=34.3575418994413, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI41327779, Length=389, Percent_Identity=35.73264781491, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI256223453, Length=360, Percent_Identity=31.3888888888889, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI38327634, Length=410, Percent_Identity=33.4146341463415, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI17505907, Length=465, Percent_Identity=29.6774193548387, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=32.3759791122715, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI6005743, Length=383, Percent_Identity=32.1148825065274, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=33.983286908078, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI62241022, Length=365, Percent_Identity=32.8767123287671, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI38569503, Length=352, Percent_Identity=34.375, Blast_Score=182, Evalue=9e-46,
Organism=Homo sapiens, GI4758112, Length=349, Percent_Identity=30.6590257879656, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI18375623, Length=349, Percent_Identity=30.6590257879656, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI21040371, Length=349, Percent_Identity=31.2320916905444, Blast_Score=177, Evalue=3e-44,
Organism=Homo sapiens, GI62241024, Length=344, Percent_Identity=32.5581395348837, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI9506931, Length=418, Percent_Identity=28.9473684210526, Blast_Score=160, Evalue=4e-39,
Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=31.6417910447761, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI154759257, Length=420, Percent_Identity=29.5238095238095, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI256773275, Length=380, Percent_Identity=30.2631578947368, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI20336298, Length=359, Percent_Identity=30.08356545961, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI9966805, Length=328, Percent_Identity=30.1829268292683, Blast_Score=126, Evalue=4e-29,
Organism=Escherichia coli, GI1787016, Length=380, Percent_Identity=43.421052631579, Blast_Score=305, Evalue=3e-84,
Organism=Escherichia coli, GI87082221, Length=375, Percent_Identity=44.8, Blast_Score=303, Evalue=2e-83,
Organism=Escherichia coli, GI1787605, Length=365, Percent_Identity=41.6438356164384, Blast_Score=270, Evalue=2e-73,
Organism=Escherichia coli, GI1788930, Length=378, Percent_Identity=42.3280423280423, Blast_Score=262, Evalue=5e-71,
Organism=Escherichia coli, GI1790214, Length=373, Percent_Identity=40.4825737265416, Blast_Score=260, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI17510307, Length=388, Percent_Identity=37.8865979381443, Blast_Score=258, Evalue=4e-69,
Organism=Caenorhabditis elegans, GI71995514, Length=388, Percent_Identity=37.8865979381443, Blast_Score=258, Evalue=5e-69,
Organism=Caenorhabditis elegans, GI17510309, Length=388, Percent_Identity=37.8865979381443, Blast_Score=258, Evalue=6e-69,
Organism=Caenorhabditis elegans, GI17555296, Length=367, Percent_Identity=38.6920980926431, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI115533224, Length=433, Percent_Identity=36.4896073903002, Blast_Score=249, Evalue=4e-66,
Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=38.4210526315789, Blast_Score=245, Evalue=4e-65,
Organism=Caenorhabditis elegans, GI71987143, Length=371, Percent_Identity=35.3099730458221, Blast_Score=242, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI71995718, Length=390, Percent_Identity=36.6666666666667, Blast_Score=242, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI71995724, Length=385, Percent_Identity=35.5844155844156, Blast_Score=238, Evalue=6e-63,
Organism=Caenorhabditis elegans, GI17537549, Length=370, Percent_Identity=38.6486486486486, Blast_Score=238, Evalue=6e-63,
Organism=Caenorhabditis elegans, GI17507121, Length=371, Percent_Identity=36.1185983827493, Blast_Score=238, Evalue=7e-63,
Organism=Caenorhabditis elegans, GI17552642, Length=422, Percent_Identity=36.0189573459716, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17552114, Length=375, Percent_Identity=33.6, Blast_Score=228, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI71999644, Length=363, Percent_Identity=36.3636363636364, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI71999646, Length=362, Percent_Identity=36.4640883977901, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17510559, Length=399, Percent_Identity=33.5839598997494, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=35.6940509915014, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI17507945, Length=360, Percent_Identity=35.8333333333333, Blast_Score=216, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI17507879, Length=373, Percent_Identity=34.3163538873995, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=34.8525469168901, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17507881, Length=378, Percent_Identity=34.6560846560847, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI115532548, Length=399, Percent_Identity=33.0827067669173, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI115532546, Length=396, Percent_Identity=33.3333333333333, Blast_Score=196, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17509811, Length=352, Percent_Identity=34.9431818181818, Blast_Score=195, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=32.1989528795811, Blast_Score=192, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI193206561, Length=355, Percent_Identity=32.112676056338, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17505370, Length=391, Percent_Identity=33.5038363171356, Blast_Score=182, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17536103, Length=394, Percent_Identity=32.2335025380711, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI71982858, Length=365, Percent_Identity=30.4109589041096, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17536101, Length=386, Percent_Identity=32.9015544041451, Blast_Score=177, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71990816, Length=398, Percent_Identity=31.6582914572864, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17536099, Length=386, Percent_Identity=32.9015544041451, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17553716, Length=351, Percent_Identity=30.1994301994302, Blast_Score=158, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=29.4117647058824, Blast_Score=157, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17556951, Length=365, Percent_Identity=29.5890410958904, Blast_Score=148, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI25148291, Length=327, Percent_Identity=29.6636085626911, Blast_Score=141, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17507641, Length=401, Percent_Identity=27.930174563591, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI25148203, Length=414, Percent_Identity=25.3623188405797, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=28.3422459893048, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71997889, Length=497, Percent_Identity=26.1569416498994, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI71987152, Length=105, Percent_Identity=43.8095238095238, Blast_Score=105, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI71982862, Length=207, Percent_Identity=29.951690821256, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17566630, Length=330, Percent_Identity=25.1515151515152, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI25145561, Length=353, Percent_Identity=23.5127478753541, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324217, Length=353, Percent_Identity=41.643059490085, Blast_Score=264, Evalue=3e-71,
Organism=Saccharomyces cerevisiae, GI6325138, Length=369, Percent_Identity=40.1084010840108, Blast_Score=258, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6321360, Length=384, Percent_Identity=39.5833333333333, Blast_Score=257, Evalue=4e-69,
Organism=Saccharomyces cerevisiae, GI6324778, Length=419, Percent_Identity=36.5155131264916, Blast_Score=250, Evalue=5e-67,
Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=37.2602739726027, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6321856, Length=441, Percent_Identity=37.8684807256236, Blast_Score=243, Evalue=6e-65,
Organism=Saccharomyces cerevisiae, GI6320041, Length=386, Percent_Identity=36.2694300518135, Blast_Score=239, Evalue=6e-64,
Organism=Saccharomyces cerevisiae, GI6320449, Length=402, Percent_Identity=37.0646766169154, Blast_Score=231, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6320224, Length=369, Percent_Identity=33.0623306233062, Blast_Score=219, Evalue=7e-58,
Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=35.6164383561644, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6324620, Length=374, Percent_Identity=35.0267379679144, Blast_Score=205, Evalue=2e-53,
Organism=Saccharomyces cerevisiae, GI6322912, Length=368, Percent_Identity=33.695652173913, Blast_Score=197, Evalue=5e-51,
Organism=Saccharomyces cerevisiae, GI6322323, Length=368, Percent_Identity=33.695652173913, Blast_Score=197, Evalue=5e-51,
Organism=Saccharomyces cerevisiae, GI6319714, Length=432, Percent_Identity=28.7037037037037, Blast_Score=193, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6320119, Length=385, Percent_Identity=31.4285714285714, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6321963, Length=394, Percent_Identity=34.2639593908629, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6322427, Length=381, Percent_Identity=32.8083989501312, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6321111, Length=358, Percent_Identity=34.9162011173184, Blast_Score=179, Evalue=7e-46,
Organism=Saccharomyces cerevisiae, GI6321267, Length=381, Percent_Identity=34.6456692913386, Blast_Score=172, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6319618, Length=449, Percent_Identity=28.9532293986637, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=379, Percent_Identity=32.1899736147757, Blast_Score=161, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6320173, Length=357, Percent_Identity=31.6526610644258, Blast_Score=146, Evalue=8e-36,
Organism=Saccharomyces cerevisiae, GI6323306, Length=324, Percent_Identity=29.9382716049383, Blast_Score=128, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6324366, Length=369, Percent_Identity=26.8292682926829, Blast_Score=124, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6322876, Length=249, Percent_Identity=32.1285140562249, Blast_Score=114, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6321374, Length=410, Percent_Identity=25.609756097561, Blast_Score=111, Evalue=3e-25,
Organism=Drosophila melanogaster, GI21355075, Length=347, Percent_Identity=42.3631123919308, Blast_Score=268, Evalue=6e-72,
Organism=Drosophila melanogaster, GI18857967, Length=439, Percent_Identity=36.9020501138952, Blast_Score=259, Evalue=3e-69,
Organism=Drosophila melanogaster, GI28574962, Length=368, Percent_Identity=38.3152173913043, Blast_Score=259, Evalue=3e-69,
Organism=Drosophila melanogaster, GI24644479, Length=366, Percent_Identity=38.7978142076503, Blast_Score=258, Evalue=9e-69,
Organism=Drosophila melanogaster, GI24644483, Length=366, Percent_Identity=38.7978142076503, Blast_Score=258, Evalue=9e-69,
Organism=Drosophila melanogaster, GI281361218, Length=366, Percent_Identity=38.7978142076503, Blast_Score=258, Evalue=1e-68,
Organism=Drosophila melanogaster, GI24644481, Length=366, Percent_Identity=38.7978142076503, Blast_Score=258, Evalue=1e-68,
Organism=Drosophila melanogaster, GI24644487, Length=366, Percent_Identity=38.7978142076503, Blast_Score=257, Evalue=1e-68,
Organism=Drosophila melanogaster, GI45551833, Length=366, Percent_Identity=38.7978142076503, Blast_Score=257, Evalue=1e-68,
Organism=Drosophila melanogaster, GI24644485, Length=366, Percent_Identity=38.7978142076503, Blast_Score=257, Evalue=1e-68,
Organism=Drosophila melanogaster, GI24584399, Length=427, Percent_Identity=36.2997658079625, Blast_Score=256, Evalue=4e-68,
Organism=Drosophila melanogaster, GI17985987, Length=377, Percent_Identity=39.2572944297082, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=37.696335078534, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=39.3767705382436, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI21356161, Length=373, Percent_Identity=36.4611260053619, Blast_Score=241, Evalue=9e-64,
Organism=Drosophila melanogaster, GI28575014, Length=370, Percent_Identity=36.7567567567568, Blast_Score=240, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24662330, Length=397, Percent_Identity=36.0201511335013, Blast_Score=239, Evalue=4e-63,
Organism=Drosophila melanogaster, GI24585582, Length=374, Percent_Identity=36.8983957219251, Blast_Score=239, Evalue=4e-63,
Organism=Drosophila melanogaster, GI24583279, Length=376, Percent_Identity=34.5744680851064, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24583281, Length=376, Percent_Identity=34.5744680851064, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=38.4401114206128, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24645031, Length=361, Percent_Identity=34.9030470914127, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=37.3801916932907, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI17647335, Length=370, Percent_Identity=34.5945945945946, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24582080, Length=393, Percent_Identity=33.587786259542, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24582078, Length=393, Percent_Identity=33.587786259542, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI17136248, Length=393, Percent_Identity=33.587786259542, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24582075, Length=393, Percent_Identity=33.587786259542, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI17136814, Length=377, Percent_Identity=33.42175066313, Blast_Score=198, Evalue=8e-51,
Organism=Drosophila melanogaster, GI24666101, Length=348, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=8e-46,
Organism=Drosophila melanogaster, GI28571808, Length=411, Percent_Identity=31.3868613138686, Blast_Score=178, Evalue=7e-45,
Organism=Drosophila melanogaster, GI28571809, Length=411, Percent_Identity=31.3868613138686, Blast_Score=178, Evalue=7e-45,
Organism=Drosophila melanogaster, GI24581954, Length=365, Percent_Identity=31.2328767123288, Blast_Score=176, Evalue=5e-44,
Organism=Drosophila melanogaster, GI24581952, Length=365, Percent_Identity=31.2328767123288, Blast_Score=176, Evalue=5e-44,
Organism=Drosophila melanogaster, GI24581956, Length=365, Percent_Identity=31.2328767123288, Blast_Score=176, Evalue=5e-44,
Organism=Drosophila melanogaster, GI24642822, Length=412, Percent_Identity=30.3398058252427, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI21355559, Length=374, Percent_Identity=33.6898395721925, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24643725, Length=406, Percent_Identity=28.0788177339901, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=31.0975609756098, Blast_Score=145, Evalue=9e-35,
Organism=Drosophila melanogaster, GI24640164, Length=377, Percent_Identity=26.790450928382, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI19920478, Length=354, Percent_Identity=29.0960451977401, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI20130173, Length=337, Percent_Identity=29.673590504451, Blast_Score=126, Evalue=4e-29,
Organism=Drosophila melanogaster, GI18859659, Length=195, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI28571338, Length=195, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI17136666, Length=105, Percent_Identity=35.2380952380952, Blast_Score=72, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 59202; Mature: 59071

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS00018 EF_HAND_1 ; PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDILSAIAAENGIIEDTTQNTTTNEAASTDASDENQVTFTDLGIAKPILTALDRSGYTN
CHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCC
PTPIQAQAIPFALAGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRE
CCCCCCCCCCEEECCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEECCHHH
LAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQITALKKGVQVIVATPGRLLDHINAGRV
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEHEEECCCEEEEECCHHHHHHCCCCCE
DLSSLEILVLDEADRMLDMGFADDISDILRAAPTDRQTIMCSATWDGPVGKIAASFTKNP
ECCCEEEEEECCCHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCC
ERVSIKVESAHIEEKVYYCDDFDHKNRLLDKIVCQQDMEQIIIFAATKRSTEKLAKQLQE
CEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHH
AGHKASFLHGDLPQSKRNRIVQDLRNGKVKILVATDVAARGLDIPAISHVINYDLPRQTE
CCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCHHHHHHHCCCCCCCHH
DYVHRIGRCGRAGRTGIAISLCSMDDRPQLNAINRYLDRKMEVCIIEGMEPKKTYVPSEN
HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC
KGNGRGRGRGRSNGGGNGQGRGRAGGGYQGNPANARGRSSDSAPTGQRASNDSGYQGKPR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DASGKPNERSGGKPYQGKRTGAPSRGDSTGVPRGERAATGRGRPSGSQGRPAGRSDSRGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRPTGGNRGNNS
CCCCCCCCCCCC
>Mature Secondary Structure 
TDILSAIAAENGIIEDTTQNTTTNEAASTDASDENQVTFTDLGIAKPILTALDRSGYTN
HHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCC
PTPIQAQAIPFALAGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRE
CCCCCCCCCCEEECCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEECCHHH
LAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQITALKKGVQVIVATPGRLLDHINAGRV
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEHEEECCCEEEEECCHHHHHHCCCCCE
DLSSLEILVLDEADRMLDMGFADDISDILRAAPTDRQTIMCSATWDGPVGKIAASFTKNP
ECCCEEEEEECCCHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCC
ERVSIKVESAHIEEKVYYCDDFDHKNRLLDKIVCQQDMEQIIIFAATKRSTEKLAKQLQE
CEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHH
AGHKASFLHGDLPQSKRNRIVQDLRNGKVKILVATDVAARGLDIPAISHVINYDLPRQTE
CCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCHHHHHHHCCCCCCCHH
DYVHRIGRCGRAGRTGIAISLCSMDDRPQLNAINRYLDRKMEVCIIEGMEPKKTYVPSEN
HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC
KGNGRGRGRGRSNGGGNGQGRGRAGGGYQGNPANARGRSSDSAPTGQRASNDSGYQGKPR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DASGKPNERSGGKPYQGKRTGAPSRGDSTGVPRGERAATGRGRPSGSQGRPAGRSDSRGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRPTGGNRGNNS
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]