Click here to switch to the map view.

The map label for this gene is 93006204

Identifier: 93006204

GI number: 93006204

Start: 1685819

End: 1687063

Strand: Reverse

Name: 93006204

Synonym: Pcryo_1378

Alternate gene names: NA

Gene position: 1687063-1685819 (Counterclockwise)

Preceding gene: 93006205

Following gene: 93006202

Centisome position: 55.14

GC content: 46.91

Gene sequence:

>1245_bases
ATGCCGGATATTTCTTATTTAGCTATTGAAAGCTTGCCATTAGCGTTTGGCATCATTATGGCGATTATTGGTTTGGTATT
TTATACCCAAGCATTGCCTGGTAAGTTTTGGCAACGGTTTTATGCGGTGCTACCGGGTATCGTACTGTGCTGTTTTATCC
CTGCGACGCTAAATAGTCTAGGTGTCTTCGCTGACGGTATTGGCTCGCAGATTTATGGTTTTACTGCTACCTATCTGTTG
CCAGCCAGTTTGCTTTTAATGACCTTGTCGATGGATGTACCGAAGATATTGGGTCTAGGCTGGAAAGCGATTGCGATGTT
CTTCGCTGCTAGTATCGCTATTGTCATTAGTGGTCCTATTAGCTTAGGTATCGCTAAATGGGTGTCGCCTGAGATGTTTA
CCGATGACACGCTATGGCGCGGCTTTTCAGCGGTTGCTGGTAGTTGGATAGGAGGAGCTGCTAACCAAGCAGCGATGAAG
GAGCTATTTGGCGTCAGTGATGATTTATTTGGGATGATGATTTTGGTCGATACCACCAATGCTTCATTATGGTTATTGGC
CATCTTAGTCATGGCAAAACACAGTGAGAAGATTGACAAGTTTTTACGGGCAGATAGCAGTAGCATTGATAAGGTTGTCA
AAGCCGTTGAGAGCTATGAGCGTGACAATGCGCGCCCAGCCACTTTAAATGATTTGATGGTGATGTTTGGCTTGTGTTTC
GCCATGGTTGGGGTGGCGCATTTCGTAGGCGGTCAAATAGCAGGCTTCTTTGCCCCTTACAGTTGGGCGGTACAGTATAG
CTTTGCCAGCTCATTCTTTTGGATGGTGGTGATTATCACCTTAATAGGGGTGATTTTCTCCTTTACCAAAATTCGCCGCC
TTGATCATGTTGGCGCCTCAAAAATCGGGACGGTATTTATCTTTGTTTTGATTGCCGCTATCGGTATGCAAATCAATCTT
GCCGGTATTGTCTCGCAGTGGCGTTTGCTACTCATTGGTCTATTGTGGATGAGCATTCACGTCGTGATTATTTTTGCGGT
CGCTAGAATGATTCGTGCGCCGTTTTTCTTTTTGGCGGTCGGCTCCAACGCCAATACCGGCGGCGCGTCATCGGCACCGA
TTGTCGCGACGGCATTTCACCCGTCACTAGCACCGGTTGGCGTGTTTTTGGGTATTTTAGGTTATGCTGTGGGCACTTTT
GGCGGTTATATCAGTACGCAGATGATGCGACTGGTGGTGGGGTGA

Upstream 100 bases:

>100_bases
CTTTTAAAATTAAGCTTTGTACTCGATAGCTACTTGCGCGTTTTTTTTGCCTTGTCTATACTGACAAACTTTTATTCATC
GTGTGCTGTGGAGCCAGTTG

Downstream 100 bases:

>100_bases
TAGCATTTTTATCCGTATTGACCGCATTTATGCAAATAATCACCTAACCACTGCAAAAACTCATCGCTTGTTGTTGATAC
ATTTAGGCGCAGATGGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MPDISYLAIESLPLAFGIIMAIIGLVFYTQALPGKFWQRFYAVLPGIVLCCFIPATLNSLGVFADGIGSQIYGFTATYLL
PASLLLMTLSMDVPKILGLGWKAIAMFFAASIAIVISGPISLGIAKWVSPEMFTDDTLWRGFSAVAGSWIGGAANQAAMK
ELFGVSDDLFGMMILVDTTNASLWLLAILVMAKHSEKIDKFLRADSSSIDKVVKAVESYERDNARPATLNDLMVMFGLCF
AMVGVAHFVGGQIAGFFAPYSWAVQYSFASSFFWMVVIITLIGVIFSFTKIRRLDHVGASKIGTVFIFVLIAAIGMQINL
AGIVSQWRLLLIGLLWMSIHVVIIFAVARMIRAPFFFLAVGSNANTGGASSAPIVATAFHPSLAPVGVFLGILGYAVGTF
GGYISTQMMRLVVG

Sequences:

>Translated_414_residues
MPDISYLAIESLPLAFGIIMAIIGLVFYTQALPGKFWQRFYAVLPGIVLCCFIPATLNSLGVFADGIGSQIYGFTATYLL
PASLLLMTLSMDVPKILGLGWKAIAMFFAASIAIVISGPISLGIAKWVSPEMFTDDTLWRGFSAVAGSWIGGAANQAAMK
ELFGVSDDLFGMMILVDTTNASLWLLAILVMAKHSEKIDKFLRADSSSIDKVVKAVESYERDNARPATLNDLMVMFGLCF
AMVGVAHFVGGQIAGFFAPYSWAVQYSFASSFFWMVVIITLIGVIFSFTKIRRLDHVGASKIGTVFIFVLIAAIGMQINL
AGIVSQWRLLLIGLLWMSIHVVIIFAVARMIRAPFFFLAVGSNANTGGASSAPIVATAFHPSLAPVGVFLGILGYAVGTF
GGYISTQMMRLVVG
>Mature_413_residues
PDISYLAIESLPLAFGIIMAIIGLVFYTQALPGKFWQRFYAVLPGIVLCCFIPATLNSLGVFADGIGSQIYGFTATYLLP
ASLLLMTLSMDVPKILGLGWKAIAMFFAASIAIVISGPISLGIAKWVSPEMFTDDTLWRGFSAVAGSWIGGAANQAAMKE
LFGVSDDLFGMMILVDTTNASLWLLAILVMAKHSEKIDKFLRADSSSIDKVVKAVESYERDNARPATLNDLMVMFGLCFA
MVGVAHFVGGQIAGFFAPYSWAVQYSFASSFFWMVVIITLIGVIFSFTKIRRLDHVGASKIGTVFIFVLIAAIGMQINLA
GIVSQWRLLLIGLLWMSIHVVIIFAVARMIRAPFFFLAVGSNANTGGASSAPIVATAFHPSLAPVGVFLGILGYAVGTFG
GYISTQMMRLVVG

Specific function: Unknown

COG id: COG5505

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44536; Mature: 44404

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDISYLAIESLPLAFGIIMAIIGLVFYTQALPGKFWQRFYAVLPGIVLCCFIPATLNSL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVFADGIGSQIYGFTATYLLPASLLLMTLSMDVPKILGLGWKAIAMFFAASIAIVISGPI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHEECHH
SLGIAKWVSPEMFTDDTLWRGFSAVAGSWIGGAANQAAMKELFGVSDDLFGMMILVDTTN
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHEEEEEEECCC
ASLWLLAILVMAKHSEKIDKFLRADSSSIDKVVKAVESYERDNARPATLNDLMVMFGLCF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AMVGVAHFVGGQIAGFFAPYSWAVQYSFASSFFWMVVIITLIGVIFSFTKIRRLDHVGAS
HHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KIGTVFIFVLIAAIGMQINLAGIVSQWRLLLIGLLWMSIHVVIIFAVARMIRAPFFFLAV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
GSNANTGGASSAPIVATAFHPSLAPVGVFLGILGYAVGTFGGYISTQMMRLVVG
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDISYLAIESLPLAFGIIMAIIGLVFYTQALPGKFWQRFYAVLPGIVLCCFIPATLNSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVFADGIGSQIYGFTATYLLPASLLLMTLSMDVPKILGLGWKAIAMFFAASIAIVISGPI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHEECHH
SLGIAKWVSPEMFTDDTLWRGFSAVAGSWIGGAANQAAMKELFGVSDDLFGMMILVDTTN
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHEEEEEEECCC
ASLWLLAILVMAKHSEKIDKFLRADSSSIDKVVKAVESYERDNARPATLNDLMVMFGLCF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
AMVGVAHFVGGQIAGFFAPYSWAVQYSFASSFFWMVVIITLIGVIFSFTKIRRLDHVGAS
HHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KIGTVFIFVLIAAIGMQINLAGIVSQWRLLLIGLLWMSIHVVIIFAVARMIRAPFFFLAV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
GSNANTGGASSAPIVATAFHPSLAPVGVFLGILGYAVGTFGGYISTQMMRLVVG
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA