| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006172
Identifier: 93006172
GI number: 93006172
Start: 1644326
End: 1644976
Strand: Direct
Name: 93006172
Synonym: Pcryo_1344
Alternate gene names: NA
Gene position: 1644326-1644976 (Clockwise)
Preceding gene: 93006169
Following gene: 93006173
Centisome position: 53.74
GC content: 43.63
Gene sequence:
>651_bases ATGACCCCCTTAAAAATAAAATCCAGTCTTATATTCAATCGTCATCTGTCTAAGGGGTTGCGTGGTACGCTGGTGTTACT TGCCGCCTCATCACTATTTGCTTGTAGCCAACCGAGTAGTGGCGTATCTGATGCAAACACAACATCAGTAACAACCGAAA ATGCAACAGCTATCACTTTAAAGGAAGATGAACCAAACGCTAAAAGTGCTCACATGATGACAAGGTCAGTAAGTAAACCA GACCTACTAAAAAACGTCTCAGCTACGGTCTATAAAGATGCCAATTGCGGCTGCTGTAAAGAATGGATAAGTCATGCAGA AGATAATGGTCTAAGTGCAACCGCGCAAGATGTTGCGGACTTAGCCGTATTTAAAGAGCGCTACAGCGTTCCAACTGAGA TGCGTTCTTGCCATACTGTAGTCACTACTGATGATTACGTCTTTGAAGGTCATGTACCTGCTAAGTATATGGCGCAGTTC TTAGAAAATCCGCCAGTACAAGCTATGGGTCTTGCCGTACCTGGCATGCCTGTTGGTAGCCCAGGTATGGAGTATCAAAA TAAATTCATGCCCTATCAGGTTATGCAGCTCAATAAAGACGGGACGACCCAAGTTTATGCTGATATTGAATCGGTAGAGC AGCAATTATAG
Upstream 100 bases:
>100_bases GTACCCCGTTTGATGGGTTATTATGCTACATTACCAAACGATATGAAGTGTTACTTGACCTTCTATAGCTCACAATATCT ACAGTACATGAGAGAGCACT
Downstream 100 bases:
>100_bases TGTGTTAGCAGTTAAGAATACTTTGATTATAGTGTTAGCGTTAAAAGTAAATGAGGCAGGTATAAGACTGTTCTATTGCT TATAAAATGATTCTTCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTPLKIKSSLIFNRHLSKGLRGTLVLLAASSLFACSQPSSGVSDANTTSVTTENATAITLKEDEPNAKSAHMMTRSVSKP DLLKNVSATVYKDANCGCCKEWISHAEDNGLSATAQDVADLAVFKERYSVPTEMRSCHTVVTTDDYVFEGHVPAKYMAQF LENPPVQAMGLAVPGMPVGSPGMEYQNKFMPYQVMQLNKDGTTQVYADIESVEQQL
Sequences:
>Translated_216_residues MTPLKIKSSLIFNRHLSKGLRGTLVLLAASSLFACSQPSSGVSDANTTSVTTENATAITLKEDEPNAKSAHMMTRSVSKP DLLKNVSATVYKDANCGCCKEWISHAEDNGLSATAQDVADLAVFKERYSVPTEMRSCHTVVTTDDYVFEGHVPAKYMAQF LENPPVQAMGLAVPGMPVGSPGMEYQNKFMPYQVMQLNKDGTTQVYADIESVEQQL >Mature_215_residues TPLKIKSSLIFNRHLSKGLRGTLVLLAASSLFACSQPSSGVSDANTTSVTTENATAITLKEDEPNAKSAHMMTRSVSKPD LLKNVSATVYKDANCGCCKEWISHAEDNGLSATAQDVADLAVFKERYSVPTEMRSCHTVVTTDDYVFEGHVPAKYMAQFL ENPPVQAMGLAVPGMPVGSPGMEYQNKFMPYQVMQLNKDGTTQVYADIESVEQQL
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23476; Mature: 23345
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLKIKSSLIFNRHLSKGLRGTLVLLAASSLFACSQPSSGVSDANTTSVTTENATAITL CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEE KEDEPNAKSAHMMTRSVSKPDLLKNVSATVYKDANCGCCKEWISHAEDNGLSATAQDVAD ECCCCCCHHHHHHHHCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHH LAVFKERYSVPTEMRSCHTVVTTDDYVFEGHVPAKYMAQFLENPPVQAMGLAVPGMPVGS HHHHHHHHCCCHHHHHCEEEEECCCEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCCC PGMEYQNKFMPYQVMQLNKDGTTQVYADIESVEQQL CCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TPLKIKSSLIFNRHLSKGLRGTLVLLAASSLFACSQPSSGVSDANTTSVTTENATAITL CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEE KEDEPNAKSAHMMTRSVSKPDLLKNVSATVYKDANCGCCKEWISHAEDNGLSATAQDVAD ECCCCCCHHHHHHHHCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHH LAVFKERYSVPTEMRSCHTVVTTDDYVFEGHVPAKYMAQFLENPPVQAMGLAVPGMPVGS HHHHHHHHCCCHHHHHCEEEEECCCEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCCC PGMEYQNKFMPYQVMQLNKDGTTQVYADIESVEQQL CCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA