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The map label for this gene is ynfA [C]

Identifier: 93006169

GI number: 93006169

Start: 1640388

End: 1640768

Strand: Direct

Name: ynfA [C]

Synonym: Pcryo_1341

Alternate gene names: 93006169

Gene position: 1640388-1640768 (Clockwise)

Preceding gene: 93006164

Following gene: 93006172

Centisome position: 53.61

GC content: 42.26

Gene sequence:

>381_bases
ATGATAAACTCGATCGCTGCATTATGGATGACTAAAGGAGTAAGTTTTTTGTCTGAATTAAAAACAGTTGGGCTTTTTGC
TATTACTGCACTAGCAGAGATTGTAGGCTGTTATTTGCCATACTTGTGGCTAAGAGAGGGTAAGTCAATATGGCTTCTTG
TCCCTAGTGCGCTTAGTTTGGTTGCTTTTGTATGGTTACTGACTTTACATCCAACCGCTGTTGGCAGAGTTTATGCCGCC
TATGGTGGTGTGTATGTAACGATGGCAATCCTATGGTTATGGGCTGTTGATGGTATTCGACCAACGACATGGGACATATT
AGGTACATCAGTAGCACTTCTAGGCATGGCTATTATTATGTTTGCACCGCGCAACACATAG

Upstream 100 bases:

>100_bases
AGTAGCTTGCTCTTACTTTTTTGAGTATGTGACATTATTTTTATTGTCTCATTTTATACTGGGGGGGGTAGCATATTTAT
AGGATGCTTTTTATAGTGGT

Downstream 100 bases:

>100_bases
ACTATCAATCAAAGTTTACCGATACTGAGTGATCCACTACATTATTAAAAAATAATATCCATTATATTGGATATACATAT
AGCTCGACAGGGATTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MINSIAALWMTKGVSFLSELKTVGLFAITALAEIVGCYLPYLWLREGKSIWLLVPSALSLVAFVWLLTLHPTAVGRVYAA
YGGVYVTMAILWLWAVDGIRPTTWDILGTSVALLGMAIIMFAPRNT

Sequences:

>Translated_126_residues
MINSIAALWMTKGVSFLSELKTVGLFAITALAEIVGCYLPYLWLREGKSIWLLVPSALSLVAFVWLLTLHPTAVGRVYAA
YGGVYVTMAILWLWAVDGIRPTTWDILGTSVALLGMAIIMFAPRNT
>Mature_126_residues
MINSIAALWMTKGVSFLSELKTVGLFAITALAEIVGCYLPYLWLREGKSIWLLVPSALSLVAFVWLLTLHPTAVGRVYAA
YGGVYVTMAILWLWAVDGIRPTTWDILGTSVALLGMAIIMFAPRNT

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=101, Percent_Identity=60.3960396039604, Blast_Score=120, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 13805; Mature: 13805

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSIAALWMTKGVSFLSELKTVGLFAITALAEIVGCYLPYLWLREGKSIWLLVPSALSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH
VAFVWLLTLHPTAVGRVYAAYGGVYVTMAILWLWAVDGIRPTTWDILGTSVALLGMAIIM
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
FAPRNT
HCCCCC
>Mature Secondary Structure
MINSIAALWMTKGVSFLSELKTVGLFAITALAEIVGCYLPYLWLREGKSIWLLVPSALSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH
VAFVWLLTLHPTAVGRVYAAYGGVYVTMAILWLWAVDGIRPTTWDILGTSVALLGMAIIM
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
FAPRNT
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA