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The map label for this gene is catA [H]

Identifier: 93006096

GI number: 93006096

Start: 1539241

End: 1540164

Strand: Reverse

Name: catA [H]

Synonym: Pcryo_1268

Alternate gene names: 93006096

Gene position: 1540164-1539241 (Counterclockwise)

Preceding gene: 93006097

Following gene: 93006095

Centisome position: 50.33

GC content: 45.56

Gene sequence:

>924_bases
ATGGAACGCAGCCAAATTGAAGCATTAGCCACTCAGTTCATCAAAGGCAAAATCGACTTCCCTGAGCAAGTCAATCCACG
CGTACAAGAGATTGTCTTGCGTATCGTGACCGACCTTATGCAAACCATTAACGACTTAAAAATCACTGCAGATGAATATT
GGTCTGGCGTTGAGTTTATCGGTGATTTGGGCAAAGAAGCTGGTTTATTATCACCAGGCTTGGGTTTCGATCACTTCATG
GATTTAATGATTGAAGAGGATTTAAAAGCAGCCGGTCTTGACGGTGGTACTGTACGTACTATTGAAGGTCCACTCTATGT
CGCTGGTGCGCCAGAAGAAAAAGGCTTTGCGCGTCTAGATGATGGCACTGACCTTGACAATGGCACCGTGCTATTTATGC
AAGGCACTGTTTATGGTGAAGATGGAAAGCCTCTTCCAAACGCAAAAGTTGAAGTGTGGCATGCCAACAGCTTAGGTAAC
TACTCTTTCTTTGATGAATCACAGTCTCATTTCAACTTACGTCGTAGCATCATTACCGATGAAAACGGAAATTATGCATT
CCGCAGCATCGTGCCGCTAGGTTACTCAGTACCACCAGAAGGAATGACGCAAAAAGTATTGGGCGCGCTAGGACGTCATG
GTCATCGCCCCGCTCACATTCATTTCTTTGCCAGTGCTGACGGTCATCGCAAACTGACCACGCAGATTAACATCGATGGC
GATGAGTACCTATGGGATGACTTTGCTTTTGCAAGCCGCGAAGGCTTGGTACCAGAAGTGACGATGATCGAAGATGCGGA
CAAACTAAAAGAAAAAGCGCTTGATAAGCCTTACGCAAGTATCGACTTTGACTTTCATTTAGTAAAAGACATTGACCAAG
CTATACAAGGCAGCGAAGTAGAACGCCGCCGTGCTCAAGGTTAA

Upstream 100 bases:

>100_bases
AAGCAAGCCAGTACAGCTGATATCAGAATCTATAAAAACTGAGTAAGAATACTCACTGTAATTACCCCTTAATAAAACAG
TCCTCAATAAGGAGAGAGAC

Downstream 100 bases:

>100_bases
TGAGCACTCATATTAAATAGCATTAATTAATAACGATTAGCGACTTACGTTTGATATGTCCTCAGTTGTCGTATCAAACG
TTAGCTTCTAATCTCATTTT

Product: catechol 1,2-dioxygenase

Products: NA

Alternate protein names: 1,2-CTD [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MERSQIEALATQFIKGKIDFPEQVNPRVQEIVLRIVTDLMQTINDLKITADEYWSGVEFIGDLGKEAGLLSPGLGFDHFM
DLMIEEDLKAAGLDGGTVRTIEGPLYVAGAPEEKGFARLDDGTDLDNGTVLFMQGTVYGEDGKPLPNAKVEVWHANSLGN
YSFFDESQSHFNLRRSIITDENGNYAFRSIVPLGYSVPPEGMTQKVLGALGRHGHRPAHIHFFASADGHRKLTTQINIDG
DEYLWDDFAFASREGLVPEVTMIEDADKLKEKALDKPYASIDFDFHLVKDIDQAIQGSEVERRRAQG

Sequences:

>Translated_307_residues
MERSQIEALATQFIKGKIDFPEQVNPRVQEIVLRIVTDLMQTINDLKITADEYWSGVEFIGDLGKEAGLLSPGLGFDHFM
DLMIEEDLKAAGLDGGTVRTIEGPLYVAGAPEEKGFARLDDGTDLDNGTVLFMQGTVYGEDGKPLPNAKVEVWHANSLGN
YSFFDESQSHFNLRRSIITDENGNYAFRSIVPLGYSVPPEGMTQKVLGALGRHGHRPAHIHFFASADGHRKLTTQINIDG
DEYLWDDFAFASREGLVPEVTMIEDADKLKEKALDKPYASIDFDFHLVKDIDQAIQGSEVERRRAQG
>Mature_307_residues
MERSQIEALATQFIKGKIDFPEQVNPRVQEIVLRIVTDLMQTINDLKITADEYWSGVEFIGDLGKEAGLLSPGLGFDHFM
DLMIEEDLKAAGLDGGTVRTIEGPLYVAGAPEEKGFARLDDGTDLDNGTVLFMQGTVYGEDGKPLPNAKVEVWHANSLGN
YSFFDESQSHFNLRRSIITDENGNYAFRSIVPLGYSVPPEGMTQKVLGALGRHGHRPAHIHFFASADGHRKLTTQINIDG
DEYLWDDFAFASREGLVPEVTMIEDADKLKEKALDKPYASIDFDFHLVKDIDQAIQGSEVERRRAQG

Specific function: Unknown

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007535
- InterPro:   IPR012801
- InterPro:   IPR000627
- InterPro:   IPR015889 [H]

Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]

EC number: =1.13.11.1 [H]

Molecular weight: Translated: 34149; Mature: 34149

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSQIEALATQFIKGKIDFPEQVNPRVQEIVLRIVTDLMQTINDLKITADEYWSGVEFI
CCHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHH
GDLGKEAGLLSPGLGFDHFMDLMIEEDLKAAGLDGGTVRTIEGPLYVAGAPEEKGFARLD
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCEECC
DGTDLDNGTVLFMQGTVYGEDGKPLPNAKVEVWHANSLGNYSFFDESQSHFNLRRSIITD
CCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHEEEC
ENGNYAFRSIVPLGYSVPPEGMTQKVLGALGRHGHRPAHIHFFASADGHRKLTTQINIDG
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCC
DEYLWDDFAFASREGLVPEVTMIEDADKLKEKALDKPYASIDFDFHLVKDIDQAIQGSEV
CHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCHH
ERRRAQG
HHHHCCC
>Mature Secondary Structure
MERSQIEALATQFIKGKIDFPEQVNPRVQEIVLRIVTDLMQTINDLKITADEYWSGVEFI
CCHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHH
GDLGKEAGLLSPGLGFDHFMDLMIEEDLKAAGLDGGTVRTIEGPLYVAGAPEEKGFARLD
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCEECC
DGTDLDNGTVLFMQGTVYGEDGKPLPNAKVEVWHANSLGNYSFFDESQSHFNLRRSIITD
CCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHEEEC
ENGNYAFRSIVPLGYSVPPEGMTQKVLGALGRHGHRPAHIHFFASADGHRKLTTQINIDG
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCC
DEYLWDDFAFASREGLVPEVTMIEDADKLKEKALDKPYASIDFDFHLVKDIDQAIQGSEV
CHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCHH
ERRRAQG
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3170486; 10801478 [H]