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The map label for this gene is 93006058

Identifier: 93006058

GI number: 93006058

Start: 1497303

End: 1498979

Strand: Reverse

Name: 93006058

Synonym: Pcryo_1230

Alternate gene names: NA

Gene position: 1498979-1497303 (Counterclockwise)

Preceding gene: 93006059

Following gene: 93006056

Centisome position: 48.99

GC content: 44.6

Gene sequence:

>1677_bases
ATGCGTTTATCCACTCTGACCCAAGCAGTCGCTTTGATTACCGCTACTTTGATGTTGACTGCTTGCGGCGATGATTCTGA
TGTCAGTACAGAAATCATTGATGGGACACCGCCACTTTTGACAACGGATAGCAACTTTTCGAGTGGTTATAGCGCAGTTG
CGGCCGTATTTGTCTCAGGTCAAGTGCAAGATAGCGGTGGCATAAAGTCTGTGACTTATACATTGAACGGTAGAGCACCT
CAATCACTAACTATTGACAAAAATGGTTATTTTAACGATCGCATCTTGTTAGATTTAGGCGAAAACAGCATTGCCTTAGC
CGCCACTGACAATGCAGGTAACATCATGCGCTCAACCAAAAATATGTATCTGGGTGATACGGTGGCAGCTGGTGGCTCAC
ATACCGCAGCCCTTCATGATGGGCAGCTCTATGGTTGGGGGCGTAATAACTATGGGCAAACAGGCACCGCATATACCTCG
ACATTCACTGACACTATGGGACATCCAGAGTTACCGACACTCATGAATAATGCCGCAAAAAACCTAGTATCTATTAAATT
TAATCAAAACCACTCACTTGCTATCGACGATAAAGGTCAAGTTTATAGCTGGGGTAATGATGCTTATGGACAATTAGGAC
GTGGTCAGTCAAATCGTCATTCTTGTGTTAAATCCGCTGATTGTCGTCTTGATATCAGCGCGATTGCCGGTATTGATAAT
GCGGTTATGTTAGCGGCTGGTTATAATCATAATTTGGTGTTGACCAAAGACGGCAGCGTTTGGGCATTTGGCGCTAATGC
TCAAGGGCAGCTCGGTAATAACACCGCTATAGACAGCAGCATACCAGTCAAAGTTGACTTTTCGGCGTCAGAGGGCGTCG
GTCATATCATACAAGTCGTAGCCAGTAGCAGTAGCTCATATGCCTTAGATGATAAAGGTCAGGTATGGGGTTGGGGCAGC
GACGGGAGCGCCAATCTTGGGCGCGGTCAAGCATGTGATAAAGCCAACAATTGCATCAATGTTACTAATAAACCGTTACG
TATCAACGTCATTGCACATGATTTGGCTGATAGTACTGCTCAAGGGGTAGAAAAAGAAATAGTCACTCAGCTTGCTGCTG
GTAAAGATCATGTTTTAGCACTGACCAACAAAGACTCTGTCTATGGTTGGGGGCTAAATGCTAGCAGCCAAATAGGCTAC
AACGGAATTGGCTTTAAAAATACCGCAAAAGCATGGGCAAGCACCATAACTGCGCCAACCAAATTGCCTTGGTTTGCAGG
TAAAGAGGTTCGCCGTGTCTACGCCAATGGCAATGCCAGCTATGTATTGTTGGACAATGTTGCAGCAAATAACAGTAACA
CCCAAGCGTCAGATGGCATCCTTTATGCTTGGGGCATGTTTGGTGAAACAGACGGCAAAGGCAAAACAAGTTATGAAAAC
TTAGATGAACCAACAAACAAGCTGACCAGCTTAAAAAACATCGATAATATGGCGATGGGTACAATGCATCTGATTGCACA
TGAAAAACCACGCAATCAAAACAATGGCATACCTTTTAAGAACGGCAATCTGTTTACGTGGGGCTGGAGCTTTGAGGGTT
CATTAGGCAATGAAAACACCTCACATACTTGGATGTATAACTACCCTATCCCTGTAAAAATTCCTAGCCAGCTATAA

Upstream 100 bases:

>100_bases
TTATTCGCTTAAATTATTACAGTCACTTTACTAAGTGCCCCTATCTTAGGATTGGCACCGCTACCCCTTTTATTTTTATT
GATCACTGATTGAGACATTT

Downstream 100 bases:

>100_bases
GCAGTGATTATTGAGCGGCGCTCATAAAAGCGATACACAAGGACCTAGTACGTAAAAAGGGATCTTACTGAGCTTTTTAA
AAGGTATTTAAGGCTAATAA

Product: regulator of chromosome condensation

Products: NA

Alternate protein names: Alpha-Tubulin Suppressor; BNR Repeat Containing Protein; Cell Wall Anchor Domain-Containing Protein; S-Layer Domain Protein; BNR Repeat-Containing Protein; RCC1 Repeat-Containing Protein; Fibronectin Type III Domain-Containing Protein; S-Layer Domain-Containing Protein; RCC1 Domain-Containing Protein Alpha-Tubulin Suppressor; Bnr Repeat Domain Protein; IPT/TIG Domain Protein; BNR Repeat Domain Protein; Cellulosome Dockerin Type I; ATS1 Domain Repeat Lipoprotein; Regulator Of Chromosome Condensation-Like Protein; RCC1 Domain-Containing Protein; Rhs Family Protein; Cysteine-Rich Repeat Protein; Ig Domain-Containing Domain-Containing Protein; Cell Surface Receptor IPT/TIG Domain-Containing Protein; Immunoglobulin-Like; BLIP-II Repeat-Containing Protein; Copper Amine Oxidase Domain Protein; Ig Domain Domain Protein; Hyalin; RCC1 Repeat- And Reductase Domain-Containing Protein; Immunoglobulin I-Set Domain-Containing Protein; Ig Family Protein; ATS1 Domain Repeat Protein; Lipoprotein; BNR Repeat Domain-Containing Protein

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MRLSTLTQAVALITATLMLTACGDDSDVSTEIIDGTPPLLTTDSNFSSGYSAVAAVFVSGQVQDSGGIKSVTYTLNGRAP
QSLTIDKNGYFNDRILLDLGENSIALAATDNAGNIMRSTKNMYLGDTVAAGGSHTAALHDGQLYGWGRNNYGQTGTAYTS
TFTDTMGHPELPTLMNNAAKNLVSIKFNQNHSLAIDDKGQVYSWGNDAYGQLGRGQSNRHSCVKSADCRLDISAIAGIDN
AVMLAAGYNHNLVLTKDGSVWAFGANAQGQLGNNTAIDSSIPVKVDFSASEGVGHIIQVVASSSSSYALDDKGQVWGWGS
DGSANLGRGQACDKANNCINVTNKPLRINVIAHDLADSTAQGVEKEIVTQLAAGKDHVLALTNKDSVYGWGLNASSQIGY
NGIGFKNTAKAWASTITAPTKLPWFAGKEVRRVYANGNASYVLLDNVAANNSNTQASDGILYAWGMFGETDGKGKTSYEN
LDEPTNKLTSLKNIDNMAMGTMHLIAHEKPRNQNNGIPFKNGNLFTWGWSFEGSLGNENTSHTWMYNYPIPVKIPSQL

Sequences:

>Translated_558_residues
MRLSTLTQAVALITATLMLTACGDDSDVSTEIIDGTPPLLTTDSNFSSGYSAVAAVFVSGQVQDSGGIKSVTYTLNGRAP
QSLTIDKNGYFNDRILLDLGENSIALAATDNAGNIMRSTKNMYLGDTVAAGGSHTAALHDGQLYGWGRNNYGQTGTAYTS
TFTDTMGHPELPTLMNNAAKNLVSIKFNQNHSLAIDDKGQVYSWGNDAYGQLGRGQSNRHSCVKSADCRLDISAIAGIDN
AVMLAAGYNHNLVLTKDGSVWAFGANAQGQLGNNTAIDSSIPVKVDFSASEGVGHIIQVVASSSSSYALDDKGQVWGWGS
DGSANLGRGQACDKANNCINVTNKPLRINVIAHDLADSTAQGVEKEIVTQLAAGKDHVLALTNKDSVYGWGLNASSQIGY
NGIGFKNTAKAWASTITAPTKLPWFAGKEVRRVYANGNASYVLLDNVAANNSNTQASDGILYAWGMFGETDGKGKTSYEN
LDEPTNKLTSLKNIDNMAMGTMHLIAHEKPRNQNNGIPFKNGNLFTWGWSFEGSLGNENTSHTWMYNYPIPVKIPSQL
>Mature_558_residues
MRLSTLTQAVALITATLMLTACGDDSDVSTEIIDGTPPLLTTDSNFSSGYSAVAAVFVSGQVQDSGGIKSVTYTLNGRAP
QSLTIDKNGYFNDRILLDLGENSIALAATDNAGNIMRSTKNMYLGDTVAAGGSHTAALHDGQLYGWGRNNYGQTGTAYTS
TFTDTMGHPELPTLMNNAAKNLVSIKFNQNHSLAIDDKGQVYSWGNDAYGQLGRGQSNRHSCVKSADCRLDISAIAGIDN
AVMLAAGYNHNLVLTKDGSVWAFGANAQGQLGNNTAIDSSIPVKVDFSASEGVGHIIQVVASSSSSYALDDKGQVWGWGS
DGSANLGRGQACDKANNCINVTNKPLRINVIAHDLADSTAQGVEKEIVTQLAAGKDHVLALTNKDSVYGWGLNASSQIGY
NGIGFKNTAKAWASTITAPTKLPWFAGKEVRRVYANGNASYVLLDNVAANNSNTQASDGILYAWGMFGETDGKGKTSYEN
LDEPTNKLTSLKNIDNMAMGTMHLIAHEKPRNQNNGIPFKNGNLFTWGWSFEGSLGNENTSHTWMYNYPIPVKIPSQL

Specific function: Unknown

COG id: COG5184

COG function: function code DZ; Alpha-tubulin suppressor and related RCC1 domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI126131099, Length=312, Percent_Identity=27.8846153846154, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI63025188, Length=275, Percent_Identity=28.3636363636364, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI37620181, Length=275, Percent_Identity=28.3636363636364, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI4557445, Length=209, Percent_Identity=32.0574162679426, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI110825982, Length=267, Percent_Identity=30.3370786516854, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI7657152, Length=278, Percent_Identity=27.3381294964029, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI57242759, Length=209, Percent_Identity=30.622009569378, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI126032348, Length=261, Percent_Identity=28.3524904214559, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI209969703, Length=260, Percent_Identity=26.5384615384615, Blast_Score=93, Evalue=8e-19,
Organism=Homo sapiens, GI29789090, Length=260, Percent_Identity=26.5384615384615, Blast_Score=93, Evalue=8e-19,
Organism=Homo sapiens, GI259089405, Length=213, Percent_Identity=27.6995305164319, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI61563742, Length=213, Percent_Identity=27.6995305164319, Blast_Score=80, Evalue=8e-15,
Organism=Homo sapiens, GI13540582, Length=278, Percent_Identity=27.3381294964029, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI4502801, Length=218, Percent_Identity=26.1467889908257, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI114796642, Length=218, Percent_Identity=26.1467889908257, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI114796646, Length=178, Percent_Identity=30.8988764044944, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI114796644, Length=178, Percent_Identity=30.8988764044944, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI6912330, Length=422, Percent_Identity=22.2748815165877, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI4506581, Length=293, Percent_Identity=23.8907849829352, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI78190492, Length=285, Percent_Identity=24.2105263157895, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI222136641, Length=283, Percent_Identity=22.9681978798587, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI169170558, Length=258, Percent_Identity=27.1317829457364, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI169171160, Length=258, Percent_Identity=27.1317829457364, Blast_Score=66, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17510153, Length=286, Percent_Identity=27.972027972028, Blast_Score=89, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6321341, Length=304, Percent_Identity=25.3289473684211, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24655113, Length=280, Percent_Identity=30.3571428571429, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24655115, Length=280, Percent_Identity=30.3571428571429, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI281361147, Length=287, Percent_Identity=29.9651567944251, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24658888, Length=319, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24658881, Length=319, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI18859625, Length=319, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24582121, Length=215, Percent_Identity=25.1162790697674, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI20129257, Length=215, Percent_Identity=25.1162790697674, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24580714, Length=291, Percent_Identity=24.7422680412371, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59385; Mature: 59385

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00626 RCC1_2 ; PS50012 RCC1_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSTLTQAVALITATLMLTACGDDSDVSTEIIDGTPPLLTTDSNFSSGYSAVAAVFVSG
CCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCEEEECCCCCCCHHEEEEEEEEC
QVQDSGGIKSVTYTLNGRAPQSLTIDKNGYFNDRILLDLGENSIALAATDNAGNIMRSTK
EEECCCCEEEEEEEECCCCCCEEEECCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHCC
NMYLGDTVAAGGSHTAALHDGQLYGWGRNNYGQTGTAYTSTFTDTMGHPELPTLMNNAAK
CEEECCEEECCCCCEEEEECCEEEECCCCCCCCCCCEEEEEHHHCCCCCCCHHHHHHHCC
NLVSIKFNQNHSLAIDDKGQVYSWGNDAYGQLGRGQSNRHSCVKSADCRLDISAIAGIDN
CEEEEEECCCCEEEECCCCCEEECCCCHHHCCCCCCCCHHHHHHCCCCEEEEHHHCCCCC
AVMLAAGYNHNLVLTKDGSVWAFGANAQGQLGNNTAIDSSIPVKVDFSASEGVGHIIQVV
EEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCEECCCCCEEEECCCCCCHHHHHHHH
ASSSSSYALDDKGQVWGWGSDGSANLGRGQACDKANNCINVTNKPLRINVIAHDLADSTA
HCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECHHHHHH
QGVEKEIVTQLAAGKDHVLALTNKDSVYGWGLNASSQIGYNGIGFKNTAKAWASTITAPT
HHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
KLPWFAGKEVRRVYANGNASYVLLDNVAANNSNTQASDGILYAWGMFGETDGKGKTSYEN
CCCCCCCCCEEEEEECCCCCEEEEECEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
LDEPTNKLTSLKNIDNMAMGTMHLIAHEKPRNQNNGIPFKNGNLFTWGWSFEGSLGNENT
CCCHHHHHHHHHCCCHHHHCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
SHTWMYNYPIPVKIPSQL
CEEEEEECCCCEECCCCC
>Mature Secondary Structure
MRLSTLTQAVALITATLMLTACGDDSDVSTEIIDGTPPLLTTDSNFSSGYSAVAAVFVSG
CCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCEEEECCCCCCCHHEEEEEEEEC
QVQDSGGIKSVTYTLNGRAPQSLTIDKNGYFNDRILLDLGENSIALAATDNAGNIMRSTK
EEECCCCEEEEEEEECCCCCCEEEECCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHCC
NMYLGDTVAAGGSHTAALHDGQLYGWGRNNYGQTGTAYTSTFTDTMGHPELPTLMNNAAK
CEEECCEEECCCCCEEEEECCEEEECCCCCCCCCCCEEEEEHHHCCCCCCCHHHHHHHCC
NLVSIKFNQNHSLAIDDKGQVYSWGNDAYGQLGRGQSNRHSCVKSADCRLDISAIAGIDN
CEEEEEECCCCEEEECCCCCEEECCCCHHHCCCCCCCCHHHHHHCCCCEEEEHHHCCCCC
AVMLAAGYNHNLVLTKDGSVWAFGANAQGQLGNNTAIDSSIPVKVDFSASEGVGHIIQVV
EEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCEECCCCCEEEECCCCCCHHHHHHHH
ASSSSSYALDDKGQVWGWGSDGSANLGRGQACDKANNCINVTNKPLRINVIAHDLADSTA
HCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECHHHHHH
QGVEKEIVTQLAAGKDHVLALTNKDSVYGWGLNASSQIGYNGIGFKNTAKAWASTITAPT
HHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
KLPWFAGKEVRRVYANGNASYVLLDNVAANNSNTQASDGILYAWGMFGETDGKGKTSYEN
CCCCCCCCCEEEEEECCCCCEEEEECEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
LDEPTNKLTSLKNIDNMAMGTMHLIAHEKPRNQNNGIPFKNGNLFTWGWSFEGSLGNENT
CCCHHHHHHHHHCCCHHHHCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
SHTWMYNYPIPVKIPSQL
CEEEEEECCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA