Click here to switch to the map view.

The map label for this gene is 93006056

Identifier: 93006056

GI number: 93006056

Start: 1495219

End: 1495926

Strand: Reverse

Name: 93006056

Synonym: Pcryo_1228

Alternate gene names: NA

Gene position: 1495926-1495219 (Counterclockwise)

Preceding gene: 93006058

Following gene: 93006054

Centisome position: 48.89

GC content: 43.08

Gene sequence:

>708_bases
ATGATGAAAAAATTAGGATTATGCGCCGCAGTGGCACTGAGCTTGAGCGCATGTGCTGGCGGGATAAACGGTGGCACCAT
TGGCAATAACAACCAAAATACTATCGTCACTCAATATCCTGTTGAAGCAGCGATGCTCAACATTTACACCAAAGCTCGTA
GTCAAAGCTTGGTAGCGACCGTCGGCAATCAAACTGCTTCAGCTGATATTACAATTACCCCAAAAGGCAGTATGGTATTC
AATAATAAACAAGTACAAGCTGCCGAAGTAAATACTATTAATAAAGTAAATAATCAAATCACTGATCAATCTGTTGCCAT
CAATTACTTTACGTTAAATCCATTGGTTTTCCATGGTTATACTGATAGCTCAGGCAAATACTCACTAGCGACCCAGAGCA
CGACGCTTCCTAAGCTGGCAACCGTTGGCTCCTCTAGTCAATTGATTGCAGAGGACGTATACGCCGATAGAAGTATGCGC
AGAAAGATAGGTAGCTATAGACAAGGCTGGTCATTGACCAGAGACACCAATAACACTGCATGGTTTTGTGTCGACACCTC
AGCCAATCTACTCGTTGCAAATGATCCCAATGGTGTCTCATCAGAATGCTATAAAATCAATGCGCGCGGCGATATCTTAG
ATAGTAAAGTGACGATTAGCCAACCGACAAACAACGGTACGAAAGCGATTGTATTTACCAGCCGCTAA

Upstream 100 bases:

>100_bases
TGTAATGATAGCAAGGACAAAGGTAGATAGCAGATGCCATGGCACAAAAATTCAATTATAGTAGACATAGATATGCTCAT
ATAAACAAAATAAGGAATAA

Downstream 100 bases:

>100_bases
ATAATTCGTCAATAAATCACTTAACGTTGCACAAAAAAACGCCCCTTAAATTAAATAAGGGGCGTTTTTTTGAAATTTAT
TTATGCTGTTATAATATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MMKKLGLCAAVALSLSACAGGINGGTIGNNNQNTIVTQYPVEAAMLNIYTKARSQSLVATVGNQTASADITITPKGSMVF
NNKQVQAAEVNTINKVNNQITDQSVAINYFTLNPLVFHGYTDSSGKYSLATQSTTLPKLATVGSSSQLIAEDVYADRSMR
RKIGSYRQGWSLTRDTNNTAWFCVDTSANLLVANDPNGVSSECYKINARGDILDSKVTISQPTNNGTKAIVFTSR

Sequences:

>Translated_235_residues
MMKKLGLCAAVALSLSACAGGINGGTIGNNNQNTIVTQYPVEAAMLNIYTKARSQSLVATVGNQTASADITITPKGSMVF
NNKQVQAAEVNTINKVNNQITDQSVAINYFTLNPLVFHGYTDSSGKYSLATQSTTLPKLATVGSSSQLIAEDVYADRSMR
RKIGSYRQGWSLTRDTNNTAWFCVDTSANLLVANDPNGVSSECYKINARGDILDSKVTISQPTNNGTKAIVFTSR
>Mature_235_residues
MMKKLGLCAAVALSLSACAGGINGGTIGNNNQNTIVTQYPVEAAMLNIYTKARSQSLVATVGNQTASADITITPKGSMVF
NNKQVQAAEVNTINKVNNQITDQSVAINYFTLNPLVFHGYTDSSGKYSLATQSTTLPKLATVGSSSQLIAEDVYADRSMR
RKIGSYRQGWSLTRDTNNTAWFCVDTSANLLVANDPNGVSSECYKINARGDILDSKVTISQPTNNGTKAIVFTSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25106; Mature: 25106

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKLGLCAAVALSLSACAGGINGGTIGNNNQNTIVTQYPVEAAMLNIYTKARSQSLVAT
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEE
VGNQTASADITITPKGSMVFNNKQVQAAEVNTINKVNNQITDQSVAINYFTLNPLVFHGY
ECCCCCCCEEEECCCCCEEECCCEEEEEECHHHHHHCCCCCCCEEEEEEEEECCEEEEEE
TDSSGKYSLATQSTTLPKLATVGSSSQLIAEDVYADRSMRRKIGSYRQGWSLTRDTNNTA
ECCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHCCCEEEECCCCEE
WFCVDTSANLLVANDPNGVSSECYKINARGDILDSKVTISQPTNNGTKAIVFTSR
EEEEECCCCEEEEECCCCCCCCEEEECCCCCEECCEEEEECCCCCCCEEEEEECC
>Mature Secondary Structure
MMKKLGLCAAVALSLSACAGGINGGTIGNNNQNTIVTQYPVEAAMLNIYTKARSQSLVAT
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEE
VGNQTASADITITPKGSMVFNNKQVQAAEVNTINKVNNQITDQSVAINYFTLNPLVFHGY
ECCCCCCCEEEECCCCCEEECCCEEEEEECHHHHHHCCCCCCCEEEEEEEEECCEEEEEE
TDSSGKYSLATQSTTLPKLATVGSSSQLIAEDVYADRSMRRKIGSYRQGWSLTRDTNNTA
ECCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHCCCEEEECCCCEE
WFCVDTSANLLVANDPNGVSSECYKINARGDILDSKVTISQPTNNGTKAIVFTSR
EEEEECCCCEEEEECCCCCCCCEEEECCCCCEECCEEEEECCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA