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The map label for this gene is 93006054

Identifier: 93006054

GI number: 93006054

Start: 1492084

End: 1492947

Strand: Reverse

Name: 93006054

Synonym: Pcryo_1226

Alternate gene names: NA

Gene position: 1492947-1492084 (Counterclockwise)

Preceding gene: 93006056

Following gene: 93006050

Centisome position: 48.79

GC content: 44.56

Gene sequence:

>864_bases
ATGACAACTCAACAGCACGTTTTGGCCTGTATTGACGGCTCAGCAGTGACAGAGTCTGTTTGTGACTATGCAGCATGGTA
TGCAAGGCGACTCAATATTTCGATAGGACTGTTGCATGTCAGCGATGTGGCAGCGTCTATTAGAAGAGACTTGTCTGGGG
CGATTGGCATCAATAGCCGTCAATTCTTGCTAGATGAATTGTCTCAGCTGGACGAGCAAAGAGCCAAGGTAGTCAATAGC
TATAGTAACGCCTTGGTGCAAGATGCCAAAAGCCATATCAAAAATCAGTTTGATGACGTAGATGTCTATGTTTATCAGCG
CCGTGGCAAGCTATTGCCTGCTATTGAGCATTTTAAAGCGCATAATCGTGCCATCGTTATGGGACGCCGCGGTGAAGACC
ATAAACATAGTCGCATAAATATCGGCAGCCAAATCGAGACAGTTGCACGAGCGTCAAACGTACCGGTGCTTATTTGCTCA
GAAAAATTCAAAGAACCTCACTCGTACATGATAGCCTTCGACGCCAGTAAAACTGCCATTAAAGCCATAACTATGTTGTC
AGAGAGCAGCTTATTAAAAGGCATGCAAGGTCATATCGTGATGATCGGCAATGATAATGAATCTGCTAAAAAAAGTCTGG
CTAATGCATGTACGCAGATGACATCGGCAGGTTTCTTGGTAGAGACCCATCATCTTCAGCAGCTTGATGCGGTCAATGGC
TTATTAGCTTTTCAAATGGAACATGCAATCGATATTATTGTGGTGGGTGCTTATGGCAGCTCAAAATTACAGCATCTATT
TCTTGGCAGCACTACGACAGAGATTATCGCCAGTACGCTGTCACCAGTGATTTTGGTACGCTAA

Upstream 100 bases:

>100_bases
TACTGATAAAAACTGGTGCTAAATTTGATATGAAAGCAGTTCATTATTAGCTGATTGACATAAAGTTGGTAGCGAAAAAA
TAAGCATTTAAGGATGAATG

Downstream 100 bases:

>100_bases
TAGCTGAAAATCCGGGTCGAGACGTTTGATAAATACCAATGACATTCTTTATAGCTTGATAAATAGTCACTAAAAAAGCA
AGGCATCTGGTGCCTTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: USP Slr1230 [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTTQQHVLACIDGSAVTESVCDYAAWYARRLNISIGLLHVSDVAASIRRDLSGAIGINSRQFLLDELSQLDEQRAKVVNS
YSNALVQDAKSHIKNQFDDVDVYVYQRRGKLLPAIEHFKAHNRAIVMGRRGEDHKHSRINIGSQIETVARASNVPVLICS
EKFKEPHSYMIAFDASKTAIKAITMLSESSLLKGMQGHIVMIGNDNESAKKSLANACTQMTSAGFLVETHHLQQLDAVNG
LLAFQMEHAIDIIVVGAYGSSKLQHLFLGSTTTEIIASTLSPVILVR

Sequences:

>Translated_287_residues
MTTQQHVLACIDGSAVTESVCDYAAWYARRLNISIGLLHVSDVAASIRRDLSGAIGINSRQFLLDELSQLDEQRAKVVNS
YSNALVQDAKSHIKNQFDDVDVYVYQRRGKLLPAIEHFKAHNRAIVMGRRGEDHKHSRINIGSQIETVARASNVPVLICS
EKFKEPHSYMIAFDASKTAIKAITMLSESSLLKGMQGHIVMIGNDNESAKKSLANACTQMTSAGFLVETHHLQQLDAVNG
LLAFQMEHAIDIIVVGAYGSSKLQHLFLGSTTTEIIASTLSPVILVR
>Mature_286_residues
TTQQHVLACIDGSAVTESVCDYAAWYARRLNISIGLLHVSDVAASIRRDLSGAIGINSRQFLLDELSQLDEQRAKVVNSY
SNALVQDAKSHIKNQFDDVDVYVYQRRGKLLPAIEHFKAHNRAIVMGRRGEDHKHSRINIGSQIETVARASNVPVLICSE
KFKEPHSYMIAFDASKTAIKAITMLSESSLLKGMQGHIVMIGNDNESAKKSLANACTQMTSAGFLVETHHLQQLDAVNGL
LAFQMEHAIDIIVVGAYGSSKLQHLFLGSTTTEIIASTLSPVILVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 31514; Mature: 31382

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQQHVLACIDGSAVTESVCDYAAWYARRLNISIGLLHVSDVAASIRRDLSGAIGINSR
CCCHHHEEEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEHHHHHHHHHHHCCCCCCCCCH
QFLLDELSQLDEQRAKVVNSYSNALVQDAKSHIKNQFDDVDVYVYQRRGKLLPAIEHFKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHC
HNRAIVMGRRGEDHKHSRINIGSQIETVARASNVPVLICSEKFKEPHSYMIAFDASKTAI
CCCEEEEECCCCCCCCCEECCCHHHHHHHHHCCCCEEEECHHCCCCCCEEEEECCCHHHH
KAITMLSESSLLKGMQGHIVMIGNDNESAKKSLANACTQMTSAGFLVETHHLQQLDAVNG
HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH
LLAFQMEHAIDIIVVGAYGSSKLQHLFLGSTTTEIIASTLSPVILVR
HHHHHHHCCEEEEEEECCCCCHHHEEEECCHHHHHHHHHCCCEEEEC
>Mature Secondary Structure 
TTQQHVLACIDGSAVTESVCDYAAWYARRLNISIGLLHVSDVAASIRRDLSGAIGINSR
CCHHHEEEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEHHHHHHHHHHHCCCCCCCCCH
QFLLDELSQLDEQRAKVVNSYSNALVQDAKSHIKNQFDDVDVYVYQRRGKLLPAIEHFKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHC
HNRAIVMGRRGEDHKHSRINIGSQIETVARASNVPVLICSEKFKEPHSYMIAFDASKTAI
CCCEEEEECCCCCCCCCEECCCHHHHHHHHHCCCCEEEECHHCCCCCCEEEEECCCHHHH
KAITMLSESSLLKGMQGHIVMIGNDNESAKKSLANACTQMTSAGFLVETHHLQQLDAVNG
HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH
LLAFQMEHAIDIIVVGAYGSSKLQHLFLGSTTTEIIASTLSPVILVR
HHHHHHHCCEEEEEEECCCCCHHHEEEECCHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]