| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is ampG [H]
Identifier: 93005984
GI number: 93005984
Start: 1401057
End: 1402718
Strand: Direct
Name: ampG [H]
Synonym: Pcryo_1156
Alternate gene names: 93005984
Gene position: 1401057-1402718 (Clockwise)
Preceding gene: 93005981
Following gene: 93005985
Centisome position: 45.79
GC content: 43.32
Gene sequence:
>1662_bases ATGTCTGCTGTCCAACCTATTCCGCCCAATTCTACTATTGCCAAGAAGTCACTTAGCGAATCTTTGCAAGCTTATCTTGA TCGGCGTTCACTTATCATGCTGTTCTTGGGCTTTGTCGCTGGCATTCCTATCTTACTAATTTTCTCTAGCTTATCATTAT GGCTGCGTGAAGCAGGGATTGATCGTAGCGTAGTAACGATGTTTAGCTGGGCGGCGCTTGGTTATGCCTTTAAGTTTATC TGGGCACCACTAATTGATGCGGTGCCATTGCCAATATTAACCAAGCTCTTAGGTCGCAGGCGCAGCTGGATTTTGGTCTC GCAGATTATGATTATTGCCGCTATTTGTATTATGGCGAGTGTCAATCCAGCGAATGAAGGCAGTCTAGTCCTGATGGCAG TAGGTGCAGTACTACTTGGCTTTTCATCAGCGACACAAGACATTGTTATTGATGCCTATCGCATCGAATTGGCACCACCA AGCCTACAAGCGGTCTTGTCTGCCATGTATGTGACCGGTTACCGTATCGGGATGATTGTCGCTGGTGCTGGGGCATTATA TTTAGCCGATTACTTTGGTTCTACCGAGAGCTTTTATAGCTATGAGGCGTGGCGCAATACCTACTGGATTATGGCAGCGG TTATGGGCATTGGGGTTATTACCACCTTGGTGATTCATGAGCCGATTAGACAACAAGTGGTCGTTGAACGTAAAACGTCA GAATATACCCGTCTAGTATTAGTATTCGCTATATCAGTCATAGGTTTTGTACTGGTATTTGCTAATGCGGGCTTGGTCTT ACCTGAGACAGAAAGTGTGTTCGCAGGCTTCTTAATCGAAGTAGTGCGTATGGTATCGAGTTTGGCAGCGGCTTTGATTA TCGGTTACAGCTTAGTAAAAGCCAATCTTGTGGAGCAAGAGTTTGCTAAGACCACATGGATTGAGCCTATTGCTGACTTT TTCCGCCGTTACGGTAAAAAGGCGTTATTGTTATTGGCGCTGATTGGTCTTTATCGTATCTCAGATATTGTTGCCGGGGT TATCTCTAACGTCTTCTATCAAGACATGGCATTCACTAAAGTTGATATTGCCAACGCCGTTAAATTGGTTGGCGTTGTCA TGGCGATTGCTGGTGGTTTCTTAGGTGGTTTATTAGCACAAAAGATGCGTATCATGCGCGCAATGATGGTTGGAGCAGTC CTTGCCTGCGTGACCAACTTGTTATTTATTCTGCTGACATACCATCCTGGGAGCTTGCCGTATATGTATTTGGCAGTAAT CCTTGATAACCTTGCAGCTGGTCTTGCTAGTGCCGTATTTATTGCCTTTTTATCTGCATTAACATCTATTCGATTTACTG CCGTCCAGTATTCAATATTTTCATCACTAATGACATTATTACCAAAAGTGGTGGGTGGTTATTCAGGCACTATCGTTGAT AGCACCAGTTATCCCTTCTTCTTTATGTTTACTTTTCTAATTGGTATTCCTATTTTAGCGCTGATTTATTATGTTGATAA ATATATCGTCATTGGTGACAATGATGATATTTACGGCGATGGCAGTGACGATAGTAATAGTGGCAGTAATAAAGGTGTTG AGTTAACCAAAGCCAATCCTAATTTAACCAATACTAATGAGCCACCGCGCGCATCAGAGTAG
Upstream 100 bases:
>100_bases TTATCCTGATAGTCTCGATGTCACACTGCCAGTAGATAAAATTTTTGGATAAAAAGTAGCGCACTGTCGTATTTTTTGTC TAAATTTTTGGTGAGTCGTT
Downstream 100 bases:
>100_bases GTTAGAGGTTATAAAAATAAAGCAGATATAATTATTAAGAGTCATTTATGACAGCGCAAAAAGCAGCAGACGTAACAGTA TGGCAAATCAAGCAGCAAGC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MSAVQPIPPNSTIAKKSLSESLQAYLDRRSLIMLFLGFVAGIPILLIFSSLSLWLREAGIDRSVVTMFSWAALGYAFKFI WAPLIDAVPLPILTKLLGRRRSWILVSQIMIIAAICIMASVNPANEGSLVLMAVGAVLLGFSSATQDIVIDAYRIELAPP SLQAVLSAMYVTGYRIGMIVAGAGALYLADYFGSTESFYSYEAWRNTYWIMAAVMGIGVITTLVIHEPIRQQVVVERKTS EYTRLVLVFAISVIGFVLVFANAGLVLPETESVFAGFLIEVVRMVSSLAAALIIGYSLVKANLVEQEFAKTTWIEPIADF FRRYGKKALLLLALIGLYRISDIVAGVISNVFYQDMAFTKVDIANAVKLVGVVMAIAGGFLGGLLAQKMRIMRAMMVGAV LACVTNLLFILLTYHPGSLPYMYLAVILDNLAAGLASAVFIAFLSALTSIRFTAVQYSIFSSLMTLLPKVVGGYSGTIVD STSYPFFFMFTFLIGIPILALIYYVDKYIVIGDNDDIYGDGSDDSNSGSNKGVELTKANPNLTNTNEPPRASE
Sequences:
>Translated_553_residues MSAVQPIPPNSTIAKKSLSESLQAYLDRRSLIMLFLGFVAGIPILLIFSSLSLWLREAGIDRSVVTMFSWAALGYAFKFI WAPLIDAVPLPILTKLLGRRRSWILVSQIMIIAAICIMASVNPANEGSLVLMAVGAVLLGFSSATQDIVIDAYRIELAPP SLQAVLSAMYVTGYRIGMIVAGAGALYLADYFGSTESFYSYEAWRNTYWIMAAVMGIGVITTLVIHEPIRQQVVVERKTS EYTRLVLVFAISVIGFVLVFANAGLVLPETESVFAGFLIEVVRMVSSLAAALIIGYSLVKANLVEQEFAKTTWIEPIADF FRRYGKKALLLLALIGLYRISDIVAGVISNVFYQDMAFTKVDIANAVKLVGVVMAIAGGFLGGLLAQKMRIMRAMMVGAV LACVTNLLFILLTYHPGSLPYMYLAVILDNLAAGLASAVFIAFLSALTSIRFTAVQYSIFSSLMTLLPKVVGGYSGTIVD STSYPFFFMFTFLIGIPILALIYYVDKYIVIGDNDDIYGDGSDDSNSGSNKGVELTKANPNLTNTNEPPRASE >Mature_552_residues SAVQPIPPNSTIAKKSLSESLQAYLDRRSLIMLFLGFVAGIPILLIFSSLSLWLREAGIDRSVVTMFSWAALGYAFKFIW APLIDAVPLPILTKLLGRRRSWILVSQIMIIAAICIMASVNPANEGSLVLMAVGAVLLGFSSATQDIVIDAYRIELAPPS LQAVLSAMYVTGYRIGMIVAGAGALYLADYFGSTESFYSYEAWRNTYWIMAAVMGIGVITTLVIHEPIRQQVVVERKTSE YTRLVLVFAISVIGFVLVFANAGLVLPETESVFAGFLIEVVRMVSSLAAALIIGYSLVKANLVEQEFAKTTWIEPIADFF RRYGKKALLLLALIGLYRISDIVAGVISNVFYQDMAFTKVDIANAVKLVGVVMAIAGGFLGGLLAQKMRIMRAMMVGAVL ACVTNLLFILLTYHPGSLPYMYLAVILDNLAAGLASAVFIAFLSALTSIRFTAVQYSIFSSLMTLLPKVVGGYSGTIVDS TSYPFFFMFTFLIGIPILALIYYVDKYIVIGDNDDIYGDGSDDSNSGSNKGVELTKANPNLTNTNEPPRASE
Specific function: Probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=210, Percent_Identity=37.6190476190476, Blast_Score=143, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 60107; Mature: 59976
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVQPIPPNSTIAKKSLSESLQAYLDRRSLIMLFLGFVAGIPILLIFSSLSLWLREAGI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DRSVVTMFSWAALGYAFKFIWAPLIDAVPLPILTKLLGRRRSWILVSQIMIIAAICIMAS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC VNPANEGSLVLMAVGAVLLGFSSATQDIVIDAYRIELAPPSLQAVLSAMYVTGYRIGMIV CCCCCCCCCHHHHHHHHHHCCCCCCHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHE AGAGALYLADYFGSTESFYSYEAWRNTYWIMAAVMGIGVITTLVIHEPIRQQVVVERKTS ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYTRLVLVFAISVIGFVLVFANAGLVLPETESVFAGFLIEVVRMVSSLAAALIIGYSLVK HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANLVEQEFAKTTWIEPIADFFRRYGKKALLLLALIGLYRISDIVAGVISNVFYQDMAFTK HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDIANAVKLVGVVMAIAGGFLGGLLAQKMRIMRAMMVGAVLACVTNLLFILLTYHPGSLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH YMYLAVILDNLAAGLASAVFIAFLSALTSIRFTAVQYSIFSSLMTLLPKVVGGYSGTIVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC STSYPFFFMFTFLIGIPILALIYYVDKYIVIGDNDDIYGDGSDDSNSGSNKGVELTKANP CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC NLTNTNEPPRASE CCCCCCCCCCCCC >Mature Secondary Structure SAVQPIPPNSTIAKKSLSESLQAYLDRRSLIMLFLGFVAGIPILLIFSSLSLWLREAGI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DRSVVTMFSWAALGYAFKFIWAPLIDAVPLPILTKLLGRRRSWILVSQIMIIAAICIMAS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC VNPANEGSLVLMAVGAVLLGFSSATQDIVIDAYRIELAPPSLQAVLSAMYVTGYRIGMIV CCCCCCCCCHHHHHHHHHHCCCCCCHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHE AGAGALYLADYFGSTESFYSYEAWRNTYWIMAAVMGIGVITTLVIHEPIRQQVVVERKTS ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYTRLVLVFAISVIGFVLVFANAGLVLPETESVFAGFLIEVVRMVSSLAAALIIGYSLVK HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANLVEQEFAKTTWIEPIADFFRRYGKKALLLLALIGLYRISDIVAGVISNVFYQDMAFTK HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDIANAVKLVGVVMAIAGGFLGGLLAQKMRIMRAMMVGAVLACVTNLLFILLTYHPGSLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH YMYLAVILDNLAAGLASAVFIAFLSALTSIRFTAVQYSIFSSLMTLLPKVVGGYSGTIVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC STSYPFFFMFTFLIGIPILALIYYVDKYIVIGDNDDIYGDGSDDSNSGSNKGVELTKANP CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCC NLTNTNEPPRASE CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]