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The map label for this gene is 93005981

Identifier: 93005981

GI number: 93005981

Start: 1396986

End: 1397945

Strand: Direct

Name: 93005981

Synonym: Pcryo_1153

Alternate gene names: NA

Gene position: 1396986-1397945 (Clockwise)

Preceding gene: 93005980

Following gene: 93005984

Centisome position: 45.65

GC content: 44.38

Gene sequence:

>960_bases
ATGATTGATGCCATTATTTTTGCTATGACCATCGTCTTGCCCAACCTTGCCTTAATGTGGTTAGGTTTTTTTATGAAAAG
ACGCGGTGAGGCGGATCAAGTGTTTATCGATCAGGCCTCCAGTTTCGTTTTTAATTATTGTCTGCCATGTCTGCTGTTTT
TTAGTGTGGTCGATAGTGACGTTGATTATGCGAAGCAAGTGGTATTGATAGGCGCTGGTATTGTGGTGACCTTTATATTG
TTTATCGGCTCTGAGCTCTATGCCAAGCGCTTTATCAGCGACCCTGCCAATCAAGGGGTTTTTGTACAAGGTATCTTTCG
CAGCAATATGGCGATTATTGGACTGGCAACCGTTGCCAACGCCTATGGGACGACTGGCTTAAGTATTGGCGCGGTATATA
TGGGTGTGGTAACAATACTGTTTAATATCTTAGCGGTGATTACGCTCAGCCGAGTGTCTAAGAGTATAGAGGATACTTGG
CTCAGTCGTAGTACCATGATTATTAAAAAGCTATTTACCAATCCGCTCATCATTGCACTCGTTGCAGCCTTTACTTATAA
AGCATTGCCACTACCACCGATAGCGGGTGTGATTCATATCACCGGTGGGTTATTAGCAGCAGTTGCTTTACCGCTTGCAC
TGATTTGTGCCGGTGCCAGTATTAATTTGAAATCGATGTTGCATCCTTCTGGACTTTCTATGCAGGCAAGCATTGGACGC
ATTGTTATTGCACCGTTGGTTGCTATAGCGGTTGGTTTTGCTTTTGGCTTAACGGGCGTACATATGGGCGTACTGTTTTT
GATGGTCGCATCACCAACAGCAGCAGCAAGCTATGTGATGGCAAAAGCGATGGGTGGCAATGATATTTTAGCGGCCAATA
TTTTGGCATTTACGACAGTAGTTGGTATGTTTGGAATGGCGATTGGCGCAGCAATATTACGCGCTATGGGGCTAATTTAA

Upstream 100 bases:

>100_bases
ACGAATTACCAACTCTATTGTTATTACTTATATCTTTTTTATTAATTTACCTCGCTATTGTCCACATTATGATGGGCTTG
TCACTAAATTGAGCCTATTT

Downstream 100 bases:

>100_bases
CCACTGCTTAATGGATGACTACATATTTATAAAACAGTGGTTAAATCAAAAGACAGTTATTAAGAAGTTATCAACCCCTG
TTTAAAAAACCTCCTCATCG

Product: auxin efflux carrier

Products: NA

Alternate protein names: Permease; Malonate Transporter; Transporter Auxin Efflux Carrier Family; Transporter AEC Family; Membrane Transporter; AEC Family Malonate Efflux Carrier; Transporter Of Auxin Efflux Carrier Family; Membrane Transport Protein Auxin Efflux Carrier; Membrane Transport Protein Family Transporter; Transporter Auxin Efflux Carrier Family Protein

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MIDAIIFAMTIVLPNLALMWLGFFMKRRGEADQVFIDQASSFVFNYCLPCLLFFSVVDSDVDYAKQVVLIGAGIVVTFIL
FIGSELYAKRFISDPANQGVFVQGIFRSNMAIIGLATVANAYGTTGLSIGAVYMGVVTILFNILAVITLSRVSKSIEDTW
LSRSTMIIKKLFTNPLIIALVAAFTYKALPLPPIAGVIHITGGLLAAVALPLALICAGASINLKSMLHPSGLSMQASIGR
IVIAPLVAIAVGFAFGLTGVHMGVLFLMVASPTAAASYVMAKAMGGNDILAANILAFTTVVGMFGMAIGAAILRAMGLI

Sequences:

>Translated_319_residues
MIDAIIFAMTIVLPNLALMWLGFFMKRRGEADQVFIDQASSFVFNYCLPCLLFFSVVDSDVDYAKQVVLIGAGIVVTFIL
FIGSELYAKRFISDPANQGVFVQGIFRSNMAIIGLATVANAYGTTGLSIGAVYMGVVTILFNILAVITLSRVSKSIEDTW
LSRSTMIIKKLFTNPLIIALVAAFTYKALPLPPIAGVIHITGGLLAAVALPLALICAGASINLKSMLHPSGLSMQASIGR
IVIAPLVAIAVGFAFGLTGVHMGVLFLMVASPTAAASYVMAKAMGGNDILAANILAFTTVVGMFGMAIGAAILRAMGLI
>Mature_319_residues
MIDAIIFAMTIVLPNLALMWLGFFMKRRGEADQVFIDQASSFVFNYCLPCLLFFSVVDSDVDYAKQVVLIGAGIVVTFIL
FIGSELYAKRFISDPANQGVFVQGIFRSNMAIIGLATVANAYGTTGLSIGAVYMGVVTILFNILAVITLSRVSKSIEDTW
LSRSTMIIKKLFTNPLIIALVAAFTYKALPLPPIAGVIHITGGLLAAVALPLALICAGASINLKSMLHPSGLSMQASIGR
IVIAPLVAIAVGFAFGLTGVHMGVLFLMVASPTAAASYVMAKAMGGNDILAANILAFTTVVGMFGMAIGAAILRAMGLI

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33567; Mature: 33567

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDAIIFAMTIVLPNLALMWLGFFMKRRGEADQVFIDQASSFVFNYCLPCLLFFSVVDSD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VDYAKQVVLIGAGIVVTFILFIGSELYAKRFISDPANQGVFVQGIFRSNMAIIGLATVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCHHHHHHHHHH
AYGTTGLSIGAVYMGVVTILFNILAVITLSRVSKSIEDTWLSRSTMIIKKLFTNPLIIAL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VAAFTYKALPLPPIAGVIHITGGLLAAVALPLALICAGASINLKSMLHPSGLSMQASIGR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHH
IVIAPLVAIAVGFAFGLTGVHMGVLFLMVASPTAAASYVMAKAMGGNDILAANILAFTTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VGMFGMAIGAAILRAMGLI
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDAIIFAMTIVLPNLALMWLGFFMKRRGEADQVFIDQASSFVFNYCLPCLLFFSVVDSD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VDYAKQVVLIGAGIVVTFILFIGSELYAKRFISDPANQGVFVQGIFRSNMAIIGLATVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCHHHHHHHHHH
AYGTTGLSIGAVYMGVVTILFNILAVITLSRVSKSIEDTWLSRSTMIIKKLFTNPLIIAL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VAAFTYKALPLPPIAGVIHITGGLLAAVALPLALICAGASINLKSMLHPSGLSMQASIGR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHH
IVIAPLVAIAVGFAFGLTGVHMGVLFLMVASPTAAASYVMAKAMGGNDILAANILAFTTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VGMFGMAIGAAILRAMGLI
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA