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The map label for this gene is ygaZ [C]

Identifier: 93005933

GI number: 93005933

Start: 1329325

End: 1330056

Strand: Reverse

Name: ygaZ [C]

Synonym: Pcryo_1105

Alternate gene names: 93005933

Gene position: 1330056-1329325 (Counterclockwise)

Preceding gene: 93005934

Following gene: 93005932

Centisome position: 43.47

GC content: 42.62

Gene sequence:

>732_bases
GTGAATACTCAATCAAATGAGATCAATCAAACTCAGATACAGGGCTATGACTGGGGAGAAGGCTTTAAAAAAAGCTTACC
AGTCGCCATGGGTTATTTGCCAGCGGGCATCGCCTTTGGTGTGCTTGCGCAAGTTGCTGGTATACCAGTATGGGCAACGA
TTATGCTCAGCGTGGTGTTGTATGCGGGTGCCGCTCAATATGCCTGCCTACCAATGTTAAGTGCTGGATTACCGATTGGC
AATATCGCAACCAATATTGCTGCTATTAACTTGCGTCATGTTTTTTATGGCATGCCGTTATTACAATATCTGCCAAAGAA
CAAAATAGCCAAGACTTATTGCTTGTTTGCTCTAACTGACGAAACTTTTTCGGTGATGACCAGTTTGCCGAATGAATCAC
GACAAGCATTGATAGTGCCCATAAGCTTATTCAATCAAAGCTGGTGGGTATTAGCAGGTGCGATTGGTGTAATGATCGGT
AGTGCACTCAGTGATTTGGTGCCACATTTAGACTTTGCCTTGGTCTGTCTGTTTGCGATTTTAGCTTATGAGCAATTCCA
AAGTATCAAACGTTATTTCCCTATTATTATTGCTGTCATTGCTTTAGTCATCGCCTCTTTTTTTACCAGTAACTGGTTAT
TATTGGTAGCGATTACGATTTGTATGCTTATGATTTTAGTCCGTGGAGTTTGGGTGCAGCGCAGTGTGCAAGGAGGCAAT
AATGAGCAGTAG

Upstream 100 bases:

>100_bases
ATGAAAAACTCCAACTTGACCATTGACCGATTGCCATTACACTATTAAGCTCCCTTTAAAATTTAATAATAAACAAGAAT
GGTAAAAACTAGGATGTGAC

Downstream 100 bases:

>100_bases
TTATCTGATTTTTGCAACGTTCGCGATGGCCGCAGTGACTTTTATTACCCGCGCTCTACCCGCTTTAATACCCAAAAAGC
TACTGGATACGCCTTGGCTG

Product: AzlC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNTQSNEINQTQIQGYDWGEGFKKSLPVAMGYLPAGIAFGVLAQVAGIPVWATIMLSVVLYAGAAQYACLPMLSAGLPIG
NIATNIAAINLRHVFYGMPLLQYLPKNKIAKTYCLFALTDETFSVMTSLPNESRQALIVPISLFNQSWWVLAGAIGVMIG
SALSDLVPHLDFALVCLFAILAYEQFQSIKRYFPIIIAVIALVIASFFTSNWLLLVAITICMLMILVRGVWVQRSVQGGN
NEQ

Sequences:

>Translated_243_residues
MNTQSNEINQTQIQGYDWGEGFKKSLPVAMGYLPAGIAFGVLAQVAGIPVWATIMLSVVLYAGAAQYACLPMLSAGLPIG
NIATNIAAINLRHVFYGMPLLQYLPKNKIAKTYCLFALTDETFSVMTSLPNESRQALIVPISLFNQSWWVLAGAIGVMIG
SALSDLVPHLDFALVCLFAILAYEQFQSIKRYFPIIIAVIALVIASFFTSNWLLLVAITICMLMILVRGVWVQRSVQGGN
NEQ
>Mature_243_residues
MNTQSNEINQTQIQGYDWGEGFKKSLPVAMGYLPAGIAFGVLAQVAGIPVWATIMLSVVLYAGAAQYACLPMLSAGLPIG
NIATNIAAINLRHVFYGMPLLQYLPKNKIAKTYCLFALTDETFSVMTSLPNESRQALIVPISLFNQSWWVLAGAIGVMIG
SALSDLVPHLDFALVCLFAILAYEQFQSIKRYFPIIIAVIALVIASFFTSNWLLLVAITICMLMILVRGVWVQRSVQGGN
NEQ

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=235, Percent_Identity=31.063829787234, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004471
- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 26554; Mature: 26554

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]