| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is proV [H]
Identifier: 93005915
GI number: 93005915
Start: 1309721
End: 1310635
Strand: Direct
Name: proV [H]
Synonym: Pcryo_1087
Alternate gene names: 93005915
Gene position: 1309721-1310635 (Clockwise)
Preceding gene: 93005914
Following gene: 93005916
Centisome position: 42.8
GC content: 43.61
Gene sequence:
>915_bases ATGAATCATATTCAGCTAGAAAATATCAGTAAGATATATAACGCCAGTCACGCACAAGCAAAAATGGCATTGGCATTGCT GGCTGAGGGTATGGATAGTATTGCGGTAAAAGAGCAAACCGGCTATTCGGTCGGGCTTTATGATATTAATTTGGCGGTCA AAGCAGGCGAGCTGCATTGTATTATGGGGTTGTCAGGCTCCGGCAAGTCAACCTTGATACGTCATATCAATCGTCTGATT GATCCAACCAGTGGCAAGATATTGGTAAATACAGATATCAATGCTAAAAACTCTGTGAATAAAATAGTATCTAACTCAGT AGTTACAAATAAAGATGCCTTGCCAATAGAGAAAGGAGAACCATCTTCTGCTATTAATATCTTAGCGCTCAATGATAAAG AGCTTCAGCACTATCGTCAGCAAACGGTCAGTATGGTATTTCAGCATTTTGGTCTGGTACCTCATATGACCGTCATTCAA AACGTCGCCTATGGCTTGCGGGTGCGAAAAATGAGTATCAAGGAGCGTCATGAGGTGGCTCGGCACTGGCTGAATGAAGT TGGTCTATCCAATCTAGAGCGTAGCTATCCCGATGAGCTGTCAGGTGGCATGCAGCAACGCGTTGGGCTGGCACGTGCTT TGGCAATGGACAATCCTATATTGCTCATGGATGAAGCCTTTTCGGCGCTCGATCCTTTGATTCGCGCTCAACTACAGGAT CAATTATTAGAGCTACAAGCACGATTGAATAAGACGATCGTGTTTATCACCCATGATATTGATGAAGCTATCAAGGTAGG TCAGCGTATTAGTATTTTGAATGGTGGACGTTTGGTGCAAACAGGCACACCAAGCGACTTACGTCATAATCCCACTGACG AATATGTAGCTAGATTTATGGGTGCTAAGCACTAG
Upstream 100 bases:
>100_bases GCAGACATAATAATGCCTTGTGTCGGTTTTAAAATAACTCAACTACATCAATCAATCTTAATAGATAACAATTCTAAAAA TAAAAACAAAGAGAACGACA
Downstream 100 bases:
>100_bases GTGTATATAGTCGATTCATTTTAAAAGCGATACAGTGCTATTGGCTATAAATTTTTTGCAGCCTCTGTCACGCCTGCGAA TAGCAAGCAAGAAAAAATTA
Product: quaternary-amine ABC transporter ATPase
Products: ADP; phosphate; quaternary amine
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MNHIQLENISKIYNASHAQAKMALALLAEGMDSIAVKEQTGYSVGLYDINLAVKAGELHCIMGLSGSGKSTLIRHINRLI DPTSGKILVNTDINAKNSVNKIVSNSVVTNKDALPIEKGEPSSAINILALNDKELQHYRQQTVSMVFQHFGLVPHMTVIQ NVAYGLRVRKMSIKERHEVARHWLNEVGLSNLERSYPDELSGGMQQRVGLARALAMDNPILLMDEAFSALDPLIRAQLQD QLLELQARLNKTIVFITHDIDEAIKVGQRISILNGGRLVQTGTPSDLRHNPTDEYVARFMGAKH
Sequences:
>Translated_304_residues MNHIQLENISKIYNASHAQAKMALALLAEGMDSIAVKEQTGYSVGLYDINLAVKAGELHCIMGLSGSGKSTLIRHINRLI DPTSGKILVNTDINAKNSVNKIVSNSVVTNKDALPIEKGEPSSAINILALNDKELQHYRQQTVSMVFQHFGLVPHMTVIQ NVAYGLRVRKMSIKERHEVARHWLNEVGLSNLERSYPDELSGGMQQRVGLARALAMDNPILLMDEAFSALDPLIRAQLQD QLLELQARLNKTIVFITHDIDEAIKVGQRISILNGGRLVQTGTPSDLRHNPTDEYVARFMGAKH >Mature_304_residues MNHIQLENISKIYNASHAQAKMALALLAEGMDSIAVKEQTGYSVGLYDINLAVKAGELHCIMGLSGSGKSTLIRHINRLI DPTSGKILVNTDINAKNSVNKIVSNSVVTNKDALPIEKGEPSSAINILALNDKELQHYRQQTVSMVFQHFGLVPHMTVIQ NVAYGLRVRKMSIKERHEVARHWLNEVGLSNLERSYPDELSGGMQQRVGLARALAMDNPILLMDEAFSALDPLIRAQLQD QLLELQARLNKTIVFITHDIDEAIKVGQRISILNGGRLVQTGTPSDLRHNPTDEYVARFMGAKH
Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine/L-proline [H]
COG id: COG4175
COG function: function code E; ABC-type proline/glycine betaine transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=241, Percent_Identity=27.3858921161826, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI31657092, Length=263, Percent_Identity=26.9961977186312, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI116734710, Length=236, Percent_Identity=25.4237288135593, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI150417984, Length=176, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI45446740, Length=252, Percent_Identity=23.8095238095238, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI47078218, Length=253, Percent_Identity=24.5059288537549, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI21536376, Length=245, Percent_Identity=24.8979591836735, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI27881501, Length=263, Percent_Identity=23.9543726235741, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI30795238, Length=263, Percent_Identity=23.9543726235741, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1789032, Length=297, Percent_Identity=44.4444444444444, Blast_Score=267, Evalue=7e-73, Organism=Escherichia coli, GI1787712, Length=256, Percent_Identity=33.59375, Blast_Score=151, Evalue=6e-38, Organism=Escherichia coli, GI1787029, Length=267, Percent_Identity=35.9550561797753, Blast_Score=151, Evalue=6e-38, Organism=Escherichia coli, GI1788450, Length=267, Percent_Identity=34.0823970037453, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1787370, Length=254, Percent_Identity=34.6456692913386, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI87081709, Length=266, Percent_Identity=30.4511278195489, Blast_Score=144, Evalue=5e-36, Organism=Escherichia coli, GI1788761, Length=273, Percent_Identity=34.7985347985348, Blast_Score=144, Evalue=8e-36, Organism=Escherichia coli, GI87081791, Length=255, Percent_Identity=31.7647058823529, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1788225, Length=271, Percent_Identity=35.7933579335793, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1789672, Length=256, Percent_Identity=34.375, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1790467, Length=271, Percent_Identity=32.4723247232472, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI87082267, Length=267, Percent_Identity=32.2097378277154, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1786398, Length=256, Percent_Identity=32.8125, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI1786563, Length=237, Percent_Identity=34.1772151898734, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1788644, Length=259, Percent_Identity=36.2934362934363, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1787089, Length=256, Percent_Identity=34.375, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1786872, Length=242, Percent_Identity=32.6446280991736, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1786253, Length=243, Percent_Identity=30.0411522633745, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1787164, Length=244, Percent_Identity=30.327868852459, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1787500, Length=259, Percent_Identity=30.5019305019305, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI145693107, Length=261, Percent_Identity=27.2030651340996, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI48994883, Length=254, Percent_Identity=29.5275590551181, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1788506, Length=271, Percent_Identity=28.4132841328413, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1789586, Length=254, Percent_Identity=32.2834645669291, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789963, Length=261, Percent_Identity=30.2681992337165, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87081834, Length=234, Percent_Identity=30.3418803418803, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789962, Length=258, Percent_Identity=27.906976744186, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1790162, Length=267, Percent_Identity=26.2172284644195, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI87081782, Length=242, Percent_Identity=28.5123966942149, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787547, Length=258, Percent_Identity=25.968992248062, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1789891, Length=241, Percent_Identity=30.7053941908714, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786703, Length=230, Percent_Identity=29.5652173913043, Blast_Score=88, Evalue=8e-19, Organism=Escherichia coli, GI1787105, Length=230, Percent_Identity=30.4347826086957, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789873, Length=242, Percent_Identity=28.9256198347107, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI48994997, Length=259, Percent_Identity=26.6409266409266, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1790544, Length=257, Percent_Identity=26.8482490272374, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1787143, Length=250, Percent_Identity=32, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789864, Length=259, Percent_Identity=24.7104247104247, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786345, Length=255, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI48995001, Length=259, Percent_Identity=23.9382239382239, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787759, Length=262, Percent_Identity=26.3358778625954, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1790739, Length=244, Percent_Identity=26.6393442622951, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1788210, Length=267, Percent_Identity=28.0898876404494, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1786803, Length=286, Percent_Identity=26.5734265734266, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI48994943, Length=250, Percent_Identity=26, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787792, Length=251, Percent_Identity=25.8964143426295, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787758, Length=253, Percent_Identity=25.6916996047431, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1789593, Length=257, Percent_Identity=23.7354085603113, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786981, Length=234, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17565938, Length=261, Percent_Identity=28.3524904214559, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71983510, Length=236, Percent_Identity=27.9661016949153, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71983516, Length=235, Percent_Identity=27.6595744680851, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71983523, Length=235, Percent_Identity=27.6595744680851, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17558664, Length=249, Percent_Identity=28.1124497991968, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71992290, Length=256, Percent_Identity=26.953125, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322640, Length=258, Percent_Identity=29.4573643410853, Blast_Score=72, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6324498, Length=268, Percent_Identity=27.9850746268657, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI28574150, Length=241, Percent_Identity=26.1410788381743, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI116007328, Length=241, Percent_Identity=26.1410788381743, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI17136662, Length=246, Percent_Identity=28.8617886178862, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI85726357, Length=247, Percent_Identity=27.9352226720648, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24643674, Length=233, Percent_Identity=26.6094420600858, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI85725262, Length=241, Percent_Identity=25.7261410788382, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24582014, Length=242, Percent_Identity=25.6198347107438, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24582012, Length=242, Percent_Identity=25.6198347107438, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR000644 - InterPro: IPR005892 [H]
Pfam domain/function: PF00005 ABC_tran; PF00571 CBS [H]
EC number: 3.6.3.32
Molecular weight: Translated: 33654; Mature: 33654
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHIQLENISKIYNASHAQAKMALALLAEGMDSIAVKEQTGYSVGLYDINLAVKAGELHC CCCCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHEEECCCCCEEEEEEEEEEEEECCEEE IMGLSGSGKSTLIRHINRLIDPTSGKILVNTDINAKNSVNKIVSNSVVTNKDALPIEKGE EEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCC PSSAINILALNDKELQHYRQQTVSMVFQHFGLVPHMTVIQNVAYGLRVRKMSIKERHEVA CCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RHWLNEVGLSNLERSYPDELSGGMQQRVGLARALAMDNPILLMDEAFSALDPLIRAQLQD HHHHHHHCHHHHHHCCCHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH QLLELQARLNKTIVFITHDIDEAIKVGQRISILNGGRLVQTGTPSDLRHNPTDEYVARFM HHHHHHHHHCCEEEEEECCHHHHHHHCCEEEEEECCEEEECCCCCCCCCCCCHHHHHHHH GAKH CCCC >Mature Secondary Structure MNHIQLENISKIYNASHAQAKMALALLAEGMDSIAVKEQTGYSVGLYDINLAVKAGELHC CCCCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHEEECCCCCEEEEEEEEEEEEECCEEE IMGLSGSGKSTLIRHINRLIDPTSGKILVNTDINAKNSVNKIVSNSVVTNKDALPIEKGE EEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCC PSSAINILALNDKELQHYRQQTVSMVFQHFGLVPHMTVIQNVAYGLRVRKMSIKERHEVA CCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RHWLNEVGLSNLERSYPDELSGGMQQRVGLARALAMDNPILLMDEAFSALDPLIRAQLQD HHHHHHHCHHHHHHCCCHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH QLLELQARLNKTIVFITHDIDEAIKVGQRISILNGGRLVQTGTPSDLRHNPTDEYVARFM HHHHHHHHHCCEEEEEECCHHHHHHHCCEEEEEECCEEEECCCCCCCCCCCCHHHHHHHH GAKH CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; quaternary amine
Specific reaction: ATP + H2O + quaternary amine(out) = ADP + phosphate + quaternary amine(in)
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2649479; 9205837; 9278503; 2691838 [H]