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The map label for this gene is 93005872

Identifier: 93005872

GI number: 93005872

Start: 1248157

End: 1248849

Strand: Direct

Name: 93005872

Synonym: Pcryo_1044

Alternate gene names: NA

Gene position: 1248157-1248849 (Clockwise)

Preceding gene: 93005871

Following gene: 93005878

Centisome position: 40.79

GC content: 39.25

Gene sequence:

>693_bases
ATGAGTGAAAATAAAGACGACAAAATTGAAGATGTATTAGTAGATTCGGAGCTGGCAAAAAAGTTGGTGCCGAATAAGTT
TAAGTTTACTAGCCAGCAAGGACGCGCCCGCCGTCAAAAATTGTTGATGGGTGCTAAAAAGTTGAGTGAAACTCAATCTA
TTAATGATATTACGCTTGCCGCTGTCTGCGAAGAAGCGGGTATTCCACGGGCGTCTGCTTATCATTTCTTCCCTAATATT
GAAGCCATATTTTTGGCGCTGCGTTTTTTAAATGCTATTGATATTTTAGATGTATTGAGAACCGTTGAAACGGTTAAATA
TGATAGATGGCAAGGGTATCTTACAGCGCTGATTGATCGCTGTGTACAAATTTTTGATGAAGATCAAACCAAAGCCAAAT
TAATTTATGATACCAATACGCCTGATTTTGAAGGCGACAGTTTTGGCGAGCATATGGATCACCAAGTAGTAAAATTGGTC
TATGATCGTTTGGCTGAACGCTATGAAGTGCCTAAGTTTGAAGATATTCAAGATGTCTTATTGATTACCTTTAGTATCGT
GAATGCGATCTTTACTGTTTCTTATCGTCGTCATGAGCGTATTACCGATAAGTATTTGCAAGAAGCTAATACGGCATCTA
TCGCTTATCTGCGTTGTTACTTGCCAGAGAAGCTACCGCGTAAAGACCGTTAG

Upstream 100 bases:

>100_bases
TCCATATATGATTGATAGAAATGGTGCTTTGATTTAAGGCGCATACTATCCGATGAACACTATATTTTTAAAGATATGAC
ATAACATTAAGAGATTTATC

Downstream 100 bases:

>100_bases
TCTGTCTATTAAGTTTTAAAGACAGACATTAAAAAAATCCGACATTTATATGTCGGATTTTTTTGCTAAATTTTTATGTA
TAAGCTTTACAAAATACTTA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSENKDDKIEDVLVDSELAKKLVPNKFKFTSQQGRARRQKLLMGAKKLSETQSINDITLAAVCEEAGIPRASAYHFFPNI
EAIFLALRFLNAIDILDVLRTVETVKYDRWQGYLTALIDRCVQIFDEDQTKAKLIYDTNTPDFEGDSFGEHMDHQVVKLV
YDRLAERYEVPKFEDIQDVLLITFSIVNAIFTVSYRRHERITDKYLQEANTASIAYLRCYLPEKLPRKDR

Sequences:

>Translated_230_residues
MSENKDDKIEDVLVDSELAKKLVPNKFKFTSQQGRARRQKLLMGAKKLSETQSINDITLAAVCEEAGIPRASAYHFFPNI
EAIFLALRFLNAIDILDVLRTVETVKYDRWQGYLTALIDRCVQIFDEDQTKAKLIYDTNTPDFEGDSFGEHMDHQVVKLV
YDRLAERYEVPKFEDIQDVLLITFSIVNAIFTVSYRRHERITDKYLQEANTASIAYLRCYLPEKLPRKDR
>Mature_229_residues
SENKDDKIEDVLVDSELAKKLVPNKFKFTSQQGRARRQKLLMGAKKLSETQSINDITLAAVCEEAGIPRASAYHFFPNIE
AIFLALRFLNAIDILDVLRTVETVKYDRWQGYLTALIDRCVQIFDEDQTKAKLIYDTNTPDFEGDSFGEHMDHQVVKLVY
DRLAERYEVPKFEDIQDVLLITFSIVNAIFTVSYRRHERITDKYLQEANTASIAYLRCYLPEKLPRKDR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26723; Mature: 26592

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENKDDKIEDVLVDSELAKKLVPNKFKFTSQQGRARRQKLLMGAKKLSETQSINDITLA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AVCEEAGIPRASAYHFFPNIEAIFLALRFLNAIDILDVLRTVETVKYDRWQGYLTALIDR
HHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVQIFDEDQTKAKLIYDTNTPDFEGDSFGEHMDHQVVKLVYDRLAERYEVPKFEDIQDVL
HHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LITFSIVNAIFTVSYRRHERITDKYLQEANTASIAYLRCYLPEKLPRKDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SENKDDKIEDVLVDSELAKKLVPNKFKFTSQQGRARRQKLLMGAKKLSETQSINDITLA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AVCEEAGIPRASAYHFFPNIEAIFLALRFLNAIDILDVLRTVETVKYDRWQGYLTALIDR
HHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVQIFDEDQTKAKLIYDTNTPDFEGDSFGEHMDHQVVKLVYDRLAERYEVPKFEDIQDVL
HHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LITFSIVNAIFTVSYRRHERITDKYLQEANTASIAYLRCYLPEKLPRKDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA