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The map label for this gene is dadA [H]

Identifier: 93005846

GI number: 93005846

Start: 1218995

End: 1220242

Strand: Direct

Name: dadA [H]

Synonym: Pcryo_1018

Alternate gene names: 93005846

Gene position: 1218995-1220242 (Clockwise)

Preceding gene: 93005845

Following gene: 93005847

Centisome position: 39.84

GC content: 44.55

Gene sequence:

>1248_bases
ATGCGTCATGAAGTTATCGTTATCGGTGCAGGTATGGTTGGCACCTCGGTTGCTTGGCATCTACAAAAAAACAATGCTGA
AGTTTTGCTTATAGACAAAAAGCTACCGGGCTCAGAGACTTCATACGGCAATGCTGGCTTGATTCAGCGTGAGGCGATTC
ATACGCATCCGTTTCCGCGCCAGCTGACTGAAATGATACGTGTATTGCCAAACCAAGGTACTGATATCCGCTATCGCATA
CCAGCTATTCTTCGTTATCATCAGGCGCTGTTGCAATACTGGAAATACTCTACACCTGCTTCAGTTAAAAAAATCGAAGG
CGAGTGGCAAACACTGATTGAGCATTGCACAAGCGAACATCAAACCATGATTAGCGCCTCTGGTGCAGATGAGCTGATTA
CCCGCGATGGTTGGTTGCAATTACATCGCTCTGAAGACACTTTTAAAGAAGCCATTGCGCTAGCTATCGATGCTCGCAAT
CAAGGTGTTGAACATAATGTATTGACAGTTGAAGAATTAAGAGTCATGGAGCCTAGCGCCAATTTTGACGAGTTCGTCGG
CGCAATTCATTGGTTGAATTCTTGGCAGGTCTCAAACCCAAGCTTTCTGGTTAAAGCCTATGCAAAAAACTTCCAAGAAA
TGGGCGGGACAATTAAAGAGACTGGCGTTCAAGAAATCTTACAAGAAGATGGCGGCTGGAAGATTGTCACCGATACCGAG
ACTTTCTATAGTGATAAATTAGTCATCGCAGCAGGACCTTGGTCTAATGATCTCATCAAGCCGCTTGGTTATGACTTGCC
ATTATTCCCGATGCGTGGCTATCATCAGCATTTTAAAGTCAACGAGAAGAACACCATCCATCATAGTATGTTTGATATGG
ATAAAGGTTTTGTCATGGGACCGATGCAGCAAGGTATCCGTATTACCACTGGTGCTGAGATGACGACCATGAATGCGCCA
AAGAATTTTGGACAGTTAAAAACCGTGCTTAAACTGGCGCGAAAAATATTGCCATTAGAAGATGCAGTTGAGAGTGAAGC
ATGGGCAGGCTCGCGTCCTTGTATGCCAGATATGAAGCCAGTTATCGGTCCTGCAAGTAACCATGAAAAATTATGGTTTG
CCTTTGGTCACAGTCATCAAGGTTTCACCTTAGGACCGATGACCGGTCGTCTGGTTGAAGAGATGATTCATGAAAAGCCA
TTACTAGTCGATATCAAACCCTTTAGCGCTGATCGCTTTTCTCGCTAA

Upstream 100 bases:

>100_bases
TAAGGGTTTAAAAAATCTTTCAATGCGTTACTATGACCACCTTACCCGTTATATTCATCTATTTAACACTCTGTATCAAA
GCCATAAAAAGGGATATGTT

Downstream 100 bases:

>100_bases
GTAAGATTTCATAAAACTTGAGTCATTTATACATTTTAAAGCATTAAAAATTAAGGATAATAATCTATGCAAAAGCTCCA
TAGTAATCAACGTATGAGTA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRHEVIVIGAGMVGTSVAWHLQKNNAEVLLIDKKLPGSETSYGNAGLIQREAIHTHPFPRQLTEMIRVLPNQGTDIRYRI
PAILRYHQALLQYWKYSTPASVKKIEGEWQTLIEHCTSEHQTMISASGADELITRDGWLQLHRSEDTFKEAIALAIDARN
QGVEHNVLTVEELRVMEPSANFDEFVGAIHWLNSWQVSNPSFLVKAYAKNFQEMGGTIKETGVQEILQEDGGWKIVTDTE
TFYSDKLVIAAGPWSNDLIKPLGYDLPLFPMRGYHQHFKVNEKNTIHHSMFDMDKGFVMGPMQQGIRITTGAEMTTMNAP
KNFGQLKTVLKLARKILPLEDAVESEAWAGSRPCMPDMKPVIGPASNHEKLWFAFGHSHQGFTLGPMTGRLVEEMIHEKP
LLVDIKPFSADRFSR

Sequences:

>Translated_415_residues
MRHEVIVIGAGMVGTSVAWHLQKNNAEVLLIDKKLPGSETSYGNAGLIQREAIHTHPFPRQLTEMIRVLPNQGTDIRYRI
PAILRYHQALLQYWKYSTPASVKKIEGEWQTLIEHCTSEHQTMISASGADELITRDGWLQLHRSEDTFKEAIALAIDARN
QGVEHNVLTVEELRVMEPSANFDEFVGAIHWLNSWQVSNPSFLVKAYAKNFQEMGGTIKETGVQEILQEDGGWKIVTDTE
TFYSDKLVIAAGPWSNDLIKPLGYDLPLFPMRGYHQHFKVNEKNTIHHSMFDMDKGFVMGPMQQGIRITTGAEMTTMNAP
KNFGQLKTVLKLARKILPLEDAVESEAWAGSRPCMPDMKPVIGPASNHEKLWFAFGHSHQGFTLGPMTGRLVEEMIHEKP
LLVDIKPFSADRFSR
>Mature_415_residues
MRHEVIVIGAGMVGTSVAWHLQKNNAEVLLIDKKLPGSETSYGNAGLIQREAIHTHPFPRQLTEMIRVLPNQGTDIRYRI
PAILRYHQALLQYWKYSTPASVKKIEGEWQTLIEHCTSEHQTMISASGADELITRDGWLQLHRSEDTFKEAIALAIDARN
QGVEHNVLTVEELRVMEPSANFDEFVGAIHWLNSWQVSNPSFLVKAYAKNFQEMGGTIKETGVQEILQEDGGWKIVTDTE
TFYSDKLVIAAGPWSNDLIKPLGYDLPLFPMRGYHQHFKVNEKNTIHHSMFDMDKGFVMGPMQQGIRITTGAEMTTMNAP
KNFGQLKTVLKLARKILPLEDAVESEAWAGSRPCMPDMKPVIGPASNHEKLWFAFGHSHQGFTLGPMTGRLVEEMIHEKP
LLVDIKPFSADRFSR

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=420, Percent_Identity=22.1428571428571, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46896; Mature: 46896

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHEVIVIGAGMVGTSVAWHLQKNNAEVLLIDKKLPGSETSYGNAGLIQREAIHTHPFPR
CCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEHHHHCCCCCHH
QLTEMIRVLPNQGTDIRYRIPAILRYHQALLQYWKYSTPASVKKIEGEWQTLIEHCTSEH
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCHH
QTMISASGADELITRDGWLQLHRSEDTFKEAIALAIDARNQGVEHNVLTVEELRVMEPSA
HEEEECCCCHHHHCCCCCEEEECCHHHHHHHHHHEEECCCCCCCCCEEEHHHHEEECCCC
NFDEFVGAIHWLNSWQVSNPSFLVKAYAKNFQEMGGTIKETGVQEILQEDGGWKIVTDTE
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCH
TFYSDKLVIAAGPWSNDLIKPLGYDLPLFPMRGYHQHFKVNEKNTIHHSMFDMDKGFVMG
HHHCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCHHHEECCCCCCHHHHHHHCCCCCEEC
PMQQGIRITTGAEMTTMNAPKNFGQLKTVLKLARKILPLEDAVESEAWAGSRPCMPDMKP
HHHCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC
VIGPASNHEKLWFAFGHSHQGFTLGPMTGRLVEEMIHEKPLLVDIKPFSADRFSR
CCCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MRHEVIVIGAGMVGTSVAWHLQKNNAEVLLIDKKLPGSETSYGNAGLIQREAIHTHPFPR
CCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEHHHHCCCCCHH
QLTEMIRVLPNQGTDIRYRIPAILRYHQALLQYWKYSTPASVKKIEGEWQTLIEHCTSEH
HHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCHH
QTMISASGADELITRDGWLQLHRSEDTFKEAIALAIDARNQGVEHNVLTVEELRVMEPSA
HEEEECCCCHHHHCCCCCEEEECCHHHHHHHHHHEEECCCCCCCCCEEEHHHHEEECCCC
NFDEFVGAIHWLNSWQVSNPSFLVKAYAKNFQEMGGTIKETGVQEILQEDGGWKIVTDTE
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCH
TFYSDKLVIAAGPWSNDLIKPLGYDLPLFPMRGYHQHFKVNEKNTIHHSMFDMDKGFVMG
HHHCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCHHHEECCCCCCHHHHHHHCCCCCEEC
PMQQGIRITTGAEMTTMNAPKNFGQLKTVLKLARKILPLEDAVESEAWAGSRPCMPDMKP
HHHCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC
VIGPASNHEKLWFAFGHSHQGFTLGPMTGRLVEEMIHEKPLLVDIKPFSADRFSR
CCCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA