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The map label for this gene is 93005830

Identifier: 93005830

GI number: 93005830

Start: 1197304

End: 1197948

Strand: Reverse

Name: 93005830

Synonym: Pcryo_1002

Alternate gene names: NA

Gene position: 1197948-1197304 (Counterclockwise)

Preceding gene: 93005836

Following gene: 93005828

Centisome position: 39.15

GC content: 45.74

Gene sequence:

>645_bases
ATGGGCAATCGTTTAAGCAAAATTTATACGCGTACTGGCGATGATGGCAGTACCGGCATGGCAGATGGTAGTCGCGTCAG
TAAGGCGGACAGCCTATTTAGTGTGATGGGTGATATTGATGAGCTCAACTCGCACATTGGCTTGGTACGTGCACAGCTTA
CTCAAGCGTTAAGTGCGCAAACCAATAATTCAAGTCACAGCCAACAGCTACCTGAACGCTTGCAAACAAAACAAGAAGTC
GACTTTGCCCAAGCTTTAGTGATTATTCAACATTTATTATTTAATATCGGTGGTGAGCTTGCTATGCCAGAATATGAAGG
CGTAAATACGATTCATATTGATTGGCTTGAGCAGCAGATCGATGCGATGAATACAACGTTACCACCGCTAAAAGACTTTA
TCTTACCAACAGGCTCATTATTGGTCAGCCAGTTGCATGTGGCACGTACTGTTTGTCGCCGCGCTGAGCGCCAAGCAGTA
TTACTAAGACAAGCGCAGCCACAAGCCATTCGACCGACAGCGGTCAGCTTTATCAACCGTTTGTCTGATTGGCTCTTTGT
CGCCGCACGTTTTTGCACAGACCCTGAACAGGTCTCTGAAGTGTTATGGGACAGCCAAGTATTACAAAAATTCGCTGATA
GTTGA

Upstream 100 bases:

>100_bases
CTTAACCCATTATCTTAGCGAAAATGCTCGTAAAATACTACAATGAGCGCGCAAGTAAGACTCTGTAATGATAAAAACAT
TGATAGTTAAGGATAAAAAT

Downstream 100 bases:

>100_bases
GCCATTTAACGAACCATAAAAAAACGCCTGCAATAAATATGTTGCAGGCGTTTTTTTATTGAAAGACTGAATTGAAATAT
TGAAACGATGCTTATCGATA

Product: cobalamin adenosyltransferase

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MGNRLSKIYTRTGDDGSTGMADGSRVSKADSLFSVMGDIDELNSHIGLVRAQLTQALSAQTNNSSHSQQLPERLQTKQEV
DFAQALVIIQHLLFNIGGELAMPEYEGVNTIHIDWLEQQIDAMNTTLPPLKDFILPTGSLLVSQLHVARTVCRRAERQAV
LLRQAQPQAIRPTAVSFINRLSDWLFVAARFCTDPEQVSEVLWDSQVLQKFADS

Sequences:

>Translated_214_residues
MGNRLSKIYTRTGDDGSTGMADGSRVSKADSLFSVMGDIDELNSHIGLVRAQLTQALSAQTNNSSHSQQLPERLQTKQEV
DFAQALVIIQHLLFNIGGELAMPEYEGVNTIHIDWLEQQIDAMNTTLPPLKDFILPTGSLLVSQLHVARTVCRRAERQAV
LLRQAQPQAIRPTAVSFINRLSDWLFVAARFCTDPEQVSEVLWDSQVLQKFADS
>Mature_213_residues
GNRLSKIYTRTGDDGSTGMADGSRVSKADSLFSVMGDIDELNSHIGLVRAQLTQALSAQTNNSSHSQQLPERLQTKQEVD
FAQALVIIQHLLFNIGGELAMPEYEGVNTIHIDWLEQQIDAMNTTLPPLKDFILPTGSLLVSQLHVARTVCRRAERQAVL
LRQAQPQAIRPTAVSFINRLSDWLFVAARFCTDPEQVSEVLWDSQVLQKFADS

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=209, Percent_Identity=35.8851674641148, Blast_Score=111, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI115534154, Length=219, Percent_Identity=29.2237442922374, Blast_Score=93, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 23789; Mature: 23658

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNRLSKIYTRTGDDGSTGMADGSRVSKADSLFSVMGDIDELNSHIGLVRAQLTQALSAQ
CCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TNNSSHSQQLPERLQTKQEVDFAQALVIIQHLLFNIGGELAMPEYEGVNTIHIDWLEQQI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHH
DAMNTTLPPLKDFILPTGSLLVSQLHVARTVCRRAERQAVLLRQAQPQAIRPTAVSFINR
HHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LSDWLFVAARFCTDPEQVSEVLWDSQVLQKFADS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GNRLSKIYTRTGDDGSTGMADGSRVSKADSLFSVMGDIDELNSHIGLVRAQLTQALSAQ
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TNNSSHSQQLPERLQTKQEVDFAQALVIIQHLLFNIGGELAMPEYEGVNTIHIDWLEQQI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHH
DAMNTTLPPLKDFILPTGSLLVSQLHVARTVCRRAERQAVLLRQAQPQAIRPTAVSFINR
HHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LSDWLFVAARFCTDPEQVSEVLWDSQVLQKFADS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]