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The map label for this gene is ugpQ [H]

Identifier: 93005828

GI number: 93005828

Start: 1195085

End: 1195813

Strand: Reverse

Name: ugpQ [H]

Synonym: Pcryo_1000

Alternate gene names: 93005828

Gene position: 1195813-1195085 (Counterclockwise)

Preceding gene: 93005830

Following gene: 93005827

Centisome position: 39.08

GC content: 43.21

Gene sequence:

>729_bases
ATGATAGATCTTAAGAACACCTTGCTACTTGGTCATCGCGGCGCGCGCGGTGAAACATTAGAAAATACCTTATCAGGTTT
TGAATATGCGCAAAATTTGCAAAGCTCTGGCTTAGCAGGTGTAGAGTTCGATGTACAACTTAGCCGAGATGGACAGCTCA
TCGTTTTTCATGATGAAACGCTTGAGCGCATGTGCGCGCAGCAGTCGCGTCTAGATCAGCTAAATGTGAGCGAAATACAG
CGTCATCATCAGTTTGGTCAGCCAATTATCACGTTGCCTGACATTGCTTCTGCTCTAAATACCTATACTTATATTGAGCT
TGAGGTTAAAACCCATAGTCGCACTGATTATGCCAAACTCGTAAAAGCCTTGATGCGTGACCTCATTGATAGCCCCCTTG
CTAGCCTACCGATTGTGCTAACCAGCTTTGATGTTGAGCTGCATGCCTATTTACAACGCAGTACTTTCATGAGGCATATA
CCACGTGGGTTGCTTATTCGAGAGCCTAAACTACTGAAACAGGCTCCCAATACTGCCTTACAACTTGGCTGTAAGCAATT
AGGTATCCACTATCCGCTTTTGAATCGTGAAGTCATACAGCATTGTCATCGCTATGACTTACCTGTAAGTGCATGGACGG
TCAATGATATTGAGACTATTAAGCAGCTTATAAACTGGCAAGTTGATGTGATTATTACAGATTACCCAAGCTATTTATTA
CTGCCTTAA

Upstream 100 bases:

>100_bases
TATTCAATACGCTTTGATACGTGATAGCTTTGGATGCAGTTAATAACAGACGATATAATATTTACATTATAATGCTCAAA
ATATGTGACGGTCACTGGTT

Downstream 100 bases:

>100_bases
CGCATTACTCCTATTTCTAAAGTCGCTTTGGTGGTGTACATATTTATTGTTTTACTTACATTTTTACCTTATAGCTGATA
AGTCACGGCTTATTTGCTAT

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MIDLKNTLLLGHRGARGETLENTLSGFEYAQNLQSSGLAGVEFDVQLSRDGQLIVFHDETLERMCAQQSRLDQLNVSEIQ
RHHQFGQPIITLPDIASALNTYTYIELEVKTHSRTDYAKLVKALMRDLIDSPLASLPIVLTSFDVELHAYLQRSTFMRHI
PRGLLIREPKLLKQAPNTALQLGCKQLGIHYPLLNREVIQHCHRYDLPVSAWTVNDIETIKQLINWQVDVIITDYPSYLL
LP

Sequences:

>Translated_242_residues
MIDLKNTLLLGHRGARGETLENTLSGFEYAQNLQSSGLAGVEFDVQLSRDGQLIVFHDETLERMCAQQSRLDQLNVSEIQ
RHHQFGQPIITLPDIASALNTYTYIELEVKTHSRTDYAKLVKALMRDLIDSPLASLPIVLTSFDVELHAYLQRSTFMRHI
PRGLLIREPKLLKQAPNTALQLGCKQLGIHYPLLNREVIQHCHRYDLPVSAWTVNDIETIKQLINWQVDVIITDYPSYLL
LP
>Mature_242_residues
MIDLKNTLLLGHRGARGETLENTLSGFEYAQNLQSSGLAGVEFDVQLSRDGQLIVFHDETLERMCAQQSRLDQLNVSEIQ
RHHQFGQPIITLPDIASALNTYTYIELEVKTHSRTDYAKLVKALMRDLIDSPLASLPIVLTSFDVELHAYLQRSTFMRHI
PRGLLIREPKLLKQAPNTALQLGCKQLGIHYPLLNREVIQHCHRYDLPVSAWTVNDIETIKQLINWQVDVIITDYPSYLL
LP

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1789858, Length=241, Percent_Identity=26.5560165975104, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27636; Mature: 27636

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00335 PARATHYROID

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLKNTLLLGHRGARGETLENTLSGFEYAQNLQSSGLAGVEFDVQLSRDGQLIVFHDET
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEHHH
LERMCAQQSRLDQLNVSEIQRHHQFGQPIITLPDIASALNTYTYIELEVKTHSRTDYAKL
HHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCEEEEEEEEECCCCCCHHHH
VKALMRDLIDSPLASLPIVLTSFDVELHAYLQRSTFMRHIPRGLLIREPKLLKQAPNTAL
HHHHHHHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCHHH
QLGCKQLGIHYPLLNREVIQHCHRYDLPVSAWTVNDIETIKQLINWQVDVIITDYPSYLL
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCEEEEEEECCCCEEE
LP
CC
>Mature Secondary Structure
MIDLKNTLLLGHRGARGETLENTLSGFEYAQNLQSSGLAGVEFDVQLSRDGQLIVFHDET
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEHHH
LERMCAQQSRLDQLNVSEIQRHHQFGQPIITLPDIASALNTYTYIELEVKTHSRTDYAKL
HHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCEEEEEEEEECCCCCCHHHH
VKALMRDLIDSPLASLPIVLTSFDVELHAYLQRSTFMRHIPRGLLIREPKLLKQAPNTAL
HHHHHHHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCHHH
QLGCKQLGIHYPLLNREVIQHCHRYDLPVSAWTVNDIETIKQLINWQVDVIITDYPSYLL
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCEEEEEEECCCCEEE
LP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]