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The map label for this gene is 93005827

Identifier: 93005827

GI number: 93005827

Start: 1193457

End: 1194860

Strand: Reverse

Name: 93005827

Synonym: Pcryo_0999

Alternate gene names: NA

Gene position: 1194860-1193457 (Counterclockwise)

Preceding gene: 93005828

Following gene: 93005826

Centisome position: 39.05

GC content: 42.95

Gene sequence:

>1404_bases
ATGATTGCAAAAAAAGCACTTGGCTTACCGCTTAAAGGCTTACGTTTCGCTATCAAATCTGGTGACACATTTGTCAAAAA
TGCCAGCATTCAAGTCACACGTTTTAAAACACGTTTTGATGAGAATAAAGCAAAAAACTCACTCGATGAGATGCCAGTTG
CCAAACGCAACTATGCAAGCGCCTCTGAGCAGACTGAACTGCCTACCGATGTAGACAGTATCGATATGCGTGAATTTGAG
TTTACCAAAGCACCGATTAACTGGATTCCAGCAACTATTCTGGTAGCCACGCCTATTGCTGCAGCAATTATTACGCCATG
GTATCTGTTCACCCATCAAGTCAGCGCACCGGTTTGGGGCGTATTTGGTGCGTTTATGATTTGGACGGGTATCAGTATCA
CAGCAGGTTATCACCGTTTACTATCGCATCGTGCTTATAAAGCGCATCCAATCGTCAAAAACTTTTTATTGCTAGGTTCT
ACCTTTGCGGTACAGGGTTCAGCGTTTGATTGGGTTTCTGGTCACCGTACGCATCATCGTCATGTCGATGATCGCTTAGA
AGACCCGTACTCAGCGAAACGTGGCTTTTTCTTTAGTCATATGGGCTGGATGCTACGCAATTATCCTAGCGGAAAATTTG
ACTATAAAAATATCCCTGACCTGACCAAAGATAGAACGCTGCAAATTCAGCATAAATATTACGGTTTATGGGTCGCTGCA
TTGAACATCGGTGCAGTCGCCGCGATCGGTTGGTTATTGGGTGATGTTTGGGGTACTTTGGTCATCGTCGGTTTGCTACG
TCTGGTACTGACGCATCACTTTACCTTCTTTATCAATTCGCTATGTCATATGTTTGGGTCGCGTCCTTATACCGATACCA
ACACTGCACGTGATAACTTCTTCTTGGCTCTATTTACGTGGGGTGAGGGTTATCATAACTATCATCACTTCTTCCAGTAC
GATTATCGTAATGGCGTAAAATGGTGGCAGTATGATCCAACCAAATGGCTCATCGCTGGTTTATCGAAGCTAGGTTTGAC
TACTGAGTTACGTACTGTTGATGACACCACTATCAAGCATGCTGAAGTACAAATGCAATTTAAAGCAGCGCAGCAGCAGA
TTGATACGGTCACATCAAGTGGTATTGATATTCCTCATGCCATGAAAAGCTTCCAAGATCGTATTAAGTTTGAATATGAT
GCCTTTACGCAAACGGTTGAAGAATGGCAAGCATTAAAAGCAAAAACCATTGAGCTGAAAAAGACCGAGTTTGCTGATCG
CTTGCATGAAGTTGAAGATGAGTTAAAGCAAGATTATGCCAAGATTGAACAAAAAATATTGGCGCATAACAGCAACCTAA
AAACAGCATTTCGCTCTATTGGCGAAAGCGCAAAAGCGGCTTAA

Upstream 100 bases:

>100_bases
TTATTGTTATTTAGCAATATTTTTATAGTGTATAAGTGTTCACTTTACTAAGTATTTAAGGTAATATAGACGCTTAAATT
AATACCGTTAGGGATATTAT

Downstream 100 bases:

>100_bases
GCATTGATCACTGTTTGATTATTTAGTATTTTATTGTGACGTTTCTCCTTCCCTCTATCTGTAAAAGATAGGGGGATTTT
TTCGTGCGGTATTAAGTATC

Product: stearoyl-CoA 9-desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Domain Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Eucaryotic Stearoyl-CoA 9-Desaturase; Fatty Acid Desaturase Protein

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MIAKKALGLPLKGLRFAIKSGDTFVKNASIQVTRFKTRFDENKAKNSLDEMPVAKRNYASASEQTELPTDVDSIDMREFE
FTKAPINWIPATILVATPIAAAIITPWYLFTHQVSAPVWGVFGAFMIWTGISITAGYHRLLSHRAYKAHPIVKNFLLLGS
TFAVQGSAFDWVSGHRTHHRHVDDRLEDPYSAKRGFFFSHMGWMLRNYPSGKFDYKNIPDLTKDRTLQIQHKYYGLWVAA
LNIGAVAAIGWLLGDVWGTLVIVGLLRLVLTHHFTFFINSLCHMFGSRPYTDTNTARDNFFLALFTWGEGYHNYHHFFQY
DYRNGVKWWQYDPTKWLIAGLSKLGLTTELRTVDDTTIKHAEVQMQFKAAQQQIDTVTSSGIDIPHAMKSFQDRIKFEYD
AFTQTVEEWQALKAKTIELKKTEFADRLHEVEDELKQDYAKIEQKILAHNSNLKTAFRSIGESAKAA

Sequences:

>Translated_467_residues
MIAKKALGLPLKGLRFAIKSGDTFVKNASIQVTRFKTRFDENKAKNSLDEMPVAKRNYASASEQTELPTDVDSIDMREFE
FTKAPINWIPATILVATPIAAAIITPWYLFTHQVSAPVWGVFGAFMIWTGISITAGYHRLLSHRAYKAHPIVKNFLLLGS
TFAVQGSAFDWVSGHRTHHRHVDDRLEDPYSAKRGFFFSHMGWMLRNYPSGKFDYKNIPDLTKDRTLQIQHKYYGLWVAA
LNIGAVAAIGWLLGDVWGTLVIVGLLRLVLTHHFTFFINSLCHMFGSRPYTDTNTARDNFFLALFTWGEGYHNYHHFFQY
DYRNGVKWWQYDPTKWLIAGLSKLGLTTELRTVDDTTIKHAEVQMQFKAAQQQIDTVTSSGIDIPHAMKSFQDRIKFEYD
AFTQTVEEWQALKAKTIELKKTEFADRLHEVEDELKQDYAKIEQKILAHNSNLKTAFRSIGESAKAA
>Mature_467_residues
MIAKKALGLPLKGLRFAIKSGDTFVKNASIQVTRFKTRFDENKAKNSLDEMPVAKRNYASASEQTELPTDVDSIDMREFE
FTKAPINWIPATILVATPIAAAIITPWYLFTHQVSAPVWGVFGAFMIWTGISITAGYHRLLSHRAYKAHPIVKNFLLLGS
TFAVQGSAFDWVSGHRTHHRHVDDRLEDPYSAKRGFFFSHMGWMLRNYPSGKFDYKNIPDLTKDRTLQIQHKYYGLWVAA
LNIGAVAAIGWLLGDVWGTLVIVGLLRLVLTHHFTFFINSLCHMFGSRPYTDTNTARDNFFLALFTWGEGYHNYHHFFQY
DYRNGVKWWQYDPTKWLIAGLSKLGLTTELRTVDDTTIKHAEVQMQFKAAQQQIDTVTSSGIDIPHAMKSFQDRIKFEYD
AFTQTVEEWQALKAKTIELKKTEFADRLHEVEDELKQDYAKIEQKILAHNSNLKTAFRSIGESAKAA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596961, Length=247, Percent_Identity=33.6032388663968, Blast_Score=153, Evalue=4e-37,
Organism=Homo sapiens, GI53759151, Length=249, Percent_Identity=34.136546184739, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI148596938, Length=116, Percent_Identity=37.0689655172414, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17561776, Length=284, Percent_Identity=34.1549295774648, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17540878, Length=237, Percent_Identity=35.0210970464135, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17561774, Length=310, Percent_Identity=30.9677419354839, Blast_Score=125, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6321383, Length=288, Percent_Identity=39.5833333333333, Blast_Score=202, Evalue=8e-53,
Organism=Drosophila melanogaster, GI24646500, Length=242, Percent_Identity=34.297520661157, Blast_Score=144, Evalue=2e-34,
Organism=Drosophila melanogaster, GI21358571, Length=426, Percent_Identity=26.2910798122066, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI24646303, Length=240, Percent_Identity=35.4166666666667, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24646299, Length=240, Percent_Identity=35.4166666666667, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24646305, Length=240, Percent_Identity=35.4166666666667, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24646301, Length=240, Percent_Identity=35.4166666666667, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24646297, Length=240, Percent_Identity=35.4166666666667, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24646295, Length=295, Percent_Identity=31.864406779661, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI21358573, Length=205, Percent_Identity=37.0731707317073, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24662393, Length=311, Percent_Identity=29.5819935691318, Blast_Score=132, Evalue=7e-31,
Organism=Drosophila melanogaster, GI161079187, Length=250, Percent_Identity=27.2, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24651333, Length=250, Percent_Identity=27.2, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53475; Mature: 53475

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKKALGLPLKGLRFAIKSGDTFVKNASIQVTRFKTRFDENKAKNSLDEMPVAKRNYAS
CCCCCCCCCCHHHHHEEECCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
ASEQTELPTDVDSIDMREFEFTKAPINWIPATILVATPIAAAIITPWYLFTHQVSAPVWG
CCCCCCCCCCCCCCCCHHHEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VFGAFMIWTGISITAGYHRLLSHRAYKAHPIVKNFLLLGSTFAVQGSAFDWVSGHRTHHR
HHHHHHHHHCCHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHHH
HVDDRLEDPYSAKRGFFFSHMGWMLRNYPSGKFDYKNIPDLTKDRTLQIQHKYYGLWVAA
CHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHEEEHHH
LNIGAVAAIGWLLGDVWGTLVIVGLLRLVLTHHFTFFINSLCHMFGSRPYTDTNTARDNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
FLALFTWGEGYHNYHHFFQYDYRNGVKWWQYDPTKWLIAGLSKLGLTTELRTVDDTTIKH
EEEEEEECCCCCCHHHHEEEECCCCCEEEEECCHHHHHHHHHHHCCCEEEEECCCCHHHH
AEVQMQFKAAQQQIDTVTSSGIDIPHAMKSFQDRIKFEYDAFTQTVEEWQALKAKTIELK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
KTEFADRLHEVEDELKQDYAKIEQKILAHNSNLKTAFRSIGESAKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHCCCC
>Mature Secondary Structure
MIAKKALGLPLKGLRFAIKSGDTFVKNASIQVTRFKTRFDENKAKNSLDEMPVAKRNYAS
CCCCCCCCCCHHHHHEEECCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
ASEQTELPTDVDSIDMREFEFTKAPINWIPATILVATPIAAAIITPWYLFTHQVSAPVWG
CCCCCCCCCCCCCCCCHHHEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VFGAFMIWTGISITAGYHRLLSHRAYKAHPIVKNFLLLGSTFAVQGSAFDWVSGHRTHHR
HHHHHHHHHCCHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHHH
HVDDRLEDPYSAKRGFFFSHMGWMLRNYPSGKFDYKNIPDLTKDRTLQIQHKYYGLWVAA
CHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHEEEHHH
LNIGAVAAIGWLLGDVWGTLVIVGLLRLVLTHHFTFFINSLCHMFGSRPYTDTNTARDNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
FLALFTWGEGYHNYHHFFQYDYRNGVKWWQYDPTKWLIAGLSKLGLTTELRTVDDTTIKH
EEEEEEECCCCCCHHHHEEEECCCCCEEEEECCHHHHHHHHHHHCCCEEEEECCCCHHHH
AEVQMQFKAAQQQIDTVTSSGIDIPHAMKSFQDRIKFEYDAFTQTVEEWQALKAKTIELK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
KTEFADRLHEVEDELKQDYAKIEQKILAHNSNLKTAFRSIGESAKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA