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The map label for this gene is amiC [H]

Identifier: 93005822

GI number: 93005822

Start: 1184732

End: 1186096

Strand: Reverse

Name: amiC [H]

Synonym: Pcryo_0994

Alternate gene names: 93005822

Gene position: 1186096-1184732 (Counterclockwise)

Preceding gene: 93005823

Following gene: 93005821

Centisome position: 38.76

GC content: 44.54

Gene sequence:

>1365_bases
ATGTCTTTATTGCCAACGCTTATCACTGCTACTCCTATTAATACAAACCATCGTATCGACTCAAAATTGACGTCACGTTT
GTCTCTGCTAGCAGTAGCTGTTGTCGGCAGCTTAAGTCTTATAGGTTGTCAAAAACCTGCAGAAACTAGCGCTGAGACCA
ATTCTACAGCTACAAAAACCGAAACGGCCGAGACCGCTACTACCCCTGCGGCAGATGGTGACACCATCAAAGTTGGCATC
TTGCATTCTTTATCTGGAACGATGGCCATCTCTGAAACATCCTTAAAAGATACTGCTCTCATGACCATTGATGAAATTAA
TGCCAATGGCGGTGTGTTGGGTAAGCAGCTAGAGCCAATCGTCGTAGATCCCGCTTCTGATTGGCCGTTATTCGCTGAAA
AAGCACGTCAGCTATTAACTCAAGACAAAGTGGATGTCATATTTGGAGGTTGGACATCGGTGTCACGTAAGTCCGTGCTG
CCTGTCGTTGAAGAGCTAAATGGTCTTATGTTCTACCCTGTGCAGTACGAAGGTCAAGAGCAGTCAAAAAATATTTTCTA
CACTGGGGCGGCACCCAACCAGCAAGCTATTCCTGCCGTTGAATACTTAATGAGTCCAGAGGGTGGTAGTGCAGAACGCT
TCGTTTTACTTGGGACCGATTATGTCTATCCTCGGACTACTAACCAGATATTGCGTGCTTTCTTGAAGTCTAAAGGCGTC
GCTGAAAAAGACATCATGGAAGAGTACACCCCTTTCGGTTTTAGCAACTATCAGACCATCGTGGGCAACATTAAAAGCTT
CTCGACCGGTAAAAAGACGGCAGTTATCTCTACCATTAATGGGGATTCAAACGTACCCTTTTATCGTGAACTTGCCAACC
AAGGTATTAAAGCATCTGACATCCCAGTCATGGCATTCTCAGTAGGAGAAGAAGAACTTCGTGGTATCGATACCAGCTTA
TTGCAAGGGCATTTGGCGTCATGGAACTACTTTATGTCGGTTAAAAATCCTGTCAACAGCGGCTTCACCAAAAAGTATAA
GAAATATGCGCTAGATCATAAGCTACCGAATGCTGAAAAGGTCGTGACCAATGATCCTATGGAAGCCACCTACGTAGGTA
TCAATATGTGGAAACAAGCAGTCGAAAAAGCAGGTACCACTAATGTCGACAAAGTGCGTATTAGTATGGGAGGTCAGACT
TTTGACGCGCCATCAGGGTATACATTAAAAATGGATGAGGAAAACCATCACTTATGGAAGCCTGTCATGATCGGTCAAAT
CCGTTCCGATGGTCAGTTCGATGTGATCAGCAAAACGCCAAAAGTCATTCGTGCTGAGCCATGGAGTCAGTACATTCCTA
AATAA

Upstream 100 bases:

>100_bases
GTATTTTGGAATGGCATAAATATTGAAGTATTAATAGCAGTTAGGAATGGTTTGTTAACTCGGCCTACCAAGCTGCTACT
TTATCTTTTTGGAGAAATAT

Downstream 100 bases:

>100_bases
GGTTGTGGTCACCCAAGCCTTAGCCTTAGTCCCTAGCCCCTTAATGGTATCAATACCAGCAACCCTTTAGCTCCTCTACT
GATAAAACAGTTTTCAGTAG

Product: branched-chain amino acid ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSLLPTLITATPINTNHRIDSKLTSRLSLLAVAVVGSLSLIGCQKPAETSAETNSTATKTETAETATTPAADGDTIKVGI
LHSLSGTMAISETSLKDTALMTIDEINANGGVLGKQLEPIVVDPASDWPLFAEKARQLLTQDKVDVIFGGWTSVSRKSVL
PVVEELNGLMFYPVQYEGQEQSKNIFYTGAAPNQQAIPAVEYLMSPEGGSAERFVLLGTDYVYPRTTNQILRAFLKSKGV
AEKDIMEEYTPFGFSNYQTIVGNIKSFSTGKKTAVISTINGDSNVPFYRELANQGIKASDIPVMAFSVGEEELRGIDTSL
LQGHLASWNYFMSVKNPVNSGFTKKYKKYALDHKLPNAEKVVTNDPMEATYVGINMWKQAVEKAGTTNVDKVRISMGGQT
FDAPSGYTLKMDEENHHLWKPVMIGQIRSDGQFDVISKTPKVIRAEPWSQYIPK

Sequences:

>Translated_454_residues
MSLLPTLITATPINTNHRIDSKLTSRLSLLAVAVVGSLSLIGCQKPAETSAETNSTATKTETAETATTPAADGDTIKVGI
LHSLSGTMAISETSLKDTALMTIDEINANGGVLGKQLEPIVVDPASDWPLFAEKARQLLTQDKVDVIFGGWTSVSRKSVL
PVVEELNGLMFYPVQYEGQEQSKNIFYTGAAPNQQAIPAVEYLMSPEGGSAERFVLLGTDYVYPRTTNQILRAFLKSKGV
AEKDIMEEYTPFGFSNYQTIVGNIKSFSTGKKTAVISTINGDSNVPFYRELANQGIKASDIPVMAFSVGEEELRGIDTSL
LQGHLASWNYFMSVKNPVNSGFTKKYKKYALDHKLPNAEKVVTNDPMEATYVGINMWKQAVEKAGTTNVDKVRISMGGQT
FDAPSGYTLKMDEENHHLWKPVMIGQIRSDGQFDVISKTPKVIRAEPWSQYIPK
>Mature_453_residues
SLLPTLITATPINTNHRIDSKLTSRLSLLAVAVVGSLSLIGCQKPAETSAETNSTATKTETAETATTPAADGDTIKVGIL
HSLSGTMAISETSLKDTALMTIDEINANGGVLGKQLEPIVVDPASDWPLFAEKARQLLTQDKVDVIFGGWTSVSRKSVLP
VVEELNGLMFYPVQYEGQEQSKNIFYTGAAPNQQAIPAVEYLMSPEGGSAERFVLLGTDYVYPRTTNQILRAFLKSKGVA
EKDIMEEYTPFGFSNYQTIVGNIKSFSTGKKTAVISTINGDSNVPFYRELANQGIKASDIPVMAFSVGEEELRGIDTSLL
QGHLASWNYFMSVKNPVNSGFTKKYKKYALDHKLPNAEKVVTNDPMEATYVGINMWKQAVEKAGTTNVDKVRISMGGQTF
DAPSGYTLKMDEENHHLWKPVMIGQIRSDGQFDVISKTPKVIRAEPWSQYIPK

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49639; Mature: 49508

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLPTLITATPINTNHRIDSKLTSRLSLLAVAVVGSLSLIGCQKPAETSAETNSTATKT
CCCCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCC
ETAETATTPAADGDTIKVGILHSLSGTMAISETSLKDTALMTIDEINANGGVLGKQLEPI
CCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCE
VVDPASDWPLFAEKARQLLTQDKVDVIFGGWTSVSRKSVLPVVEELNGLMFYPVQYEGQE
EECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEECCCC
QSKNIFYTGAAPNQQAIPAVEYLMSPEGGSAERFVLLGTDYVYPRTTNQILRAFLKSKGV
CCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCEECCCCHHHHHHHHHHHCCC
AEKDIMEEYTPFGFSNYQTIVGNIKSFSTGKKTAVISTINGDSNVPFYRELANQGIKASD
CHHHHHHHHCCCCCCCCHHHHCCHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCC
IPVMAFSVGEEELRGIDTSLLQGHLASWNYFMSVKNPVNSGFTKKYKKYALDHKLPNAEK
CCEEEEECCHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCE
VVTNDPMEATYVGINMWKQAVEKAGTTNVDKVRISMGGQTFDAPSGYTLKMDEENHHLWK
EEECCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCCCEEEECCCCCCEEC
PVMIGQIRSDGQFDVISKTPKVIRAEPWSQYIPK
CEEEEEECCCCCEEEECCCCCEEEECCHHHHCCC
>Mature Secondary Structure 
SLLPTLITATPINTNHRIDSKLTSRLSLLAVAVVGSLSLIGCQKPAETSAETNSTATKT
CCCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCC
ETAETATTPAADGDTIKVGILHSLSGTMAISETSLKDTALMTIDEINANGGVLGKQLEPI
CCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCE
VVDPASDWPLFAEKARQLLTQDKVDVIFGGWTSVSRKSVLPVVEELNGLMFYPVQYEGQE
EECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEECCCC
QSKNIFYTGAAPNQQAIPAVEYLMSPEGGSAERFVLLGTDYVYPRTTNQILRAFLKSKGV
CCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCEECCCCHHHHHHHHHHHCCC
AEKDIMEEYTPFGFSNYQTIVGNIKSFSTGKKTAVISTINGDSNVPFYRELANQGIKASD
CHHHHHHHHCCCCCCCCHHHHCCHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCC
IPVMAFSVGEEELRGIDTSLLQGHLASWNYFMSVKNPVNSGFTKKYKKYALDHKLPNAEK
CCEEEEECCHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCE
VVTNDPMEATYVGINMWKQAVEKAGTTNVDKVRISMGGQTFDAPSGYTLKMDEENHHLWK
EEECCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCCCEEEECCCCCCEEC
PVMIGQIRSDGQFDVISKTPKVIRAEPWSQYIPK
CEEEEEECCCCCEEEECCCCCEEEECCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]