| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is sgaA [H]
Identifier: 93005809
GI number: 93005809
Start: 1169987
End: 1171162
Strand: Reverse
Name: sgaA [H]
Synonym: Pcryo_0981
Alternate gene names: 93005809
Gene position: 1171162-1169987 (Counterclockwise)
Preceding gene: 93005811
Following gene: 93005808
Centisome position: 38.27
GC content: 45.15
Gene sequence:
>1176_bases ATGTCGCTACAAAACCCAATTTTTATTCCTGGCCCTACCAATATTCCTGACAGATTACGTCGCGCGATGAACGTGCCGAC GCAAGATCACCGTGCGCCTGATTTCTCAGACACGTTCTTACCAGTGCTTGCTGATTGTAAAAAAGTATTTGGCACCCAAG ATGGCGAAATCATTCTATTTACCTCTAGCGGCACAGGTGGCTGGGAAGCTGCTATTAGCAATACCTTGTCACCTGGTGAT AAAGTTCTGATTGCACGCTATGGTATGTTCTCGCATCGCTGGATCGATATGTGTCAGCGCCACGGACTTGATGTGCAAGT TGTAGAATGCGATTGGGGAACAGGCGCACCTGCTGATAAATTTCAAGCGATTTTAAACGAAGATACTGCACACGAAATCA AAGCCGTCATGGTCACCCATAACGAAACAGCAACAGGTGTTTTAAGTGATATTGGCGCCGTTCGTAAAGCCATGGATAGC AGTGACCACCCTGCTTTATTATTCGTAGATGGTGTTAGCTCAATTGCTTGCGTTCCTTTTGAGATGGATGCTTGGGGCGT AGACGTTGCTGTTGCCGGCTCACAAAAAGGCTTTATGCTCGCAACGGGTATGGCAATATTGGGCGTCAGTCAAAAAGCTT TGAGTCATATGGATGAGGCAAAGCTTCCACGTACTTATTTTGCTTTTCGTGATATGTTAAATGCCAATGCCAACGGCGGC TTCCCTTATACACCACCATTAAATCTCATCTATGGCCTAAGAGAAAGTCTTGAGATGTTGTTTGATGAAGGCCTTGATAA TGTCTATGCACGTCATTACCGTCTAGCCGAAGGTGTACGACAAGCGGTTAGCGCTTGGGGTATGAAACTGTGTGCAAAAA CACCTGACCTTTATTCTAATACCGTCAGCGCCATCTTTGTTCCTGAAGGCTTTGACAGTAACAAGCTGACCGATCATGCT TTTAATAAATATGGTATCTCATTTGGTATTGGTTTGGGCGAGATGAATGGTAAAGCATTTAGAATCGGTCATCTAGGTTC ATTAACTGAAGTTATGGTACTAGCAGGGCTTGCAACGATTGAGATGGCAATGGTTGATTTGGGCTACCCTATTAAACTGG GTCAAGGCGTTGCTGCTGCGCAAGAGTATTATCGCCACAGCGCACCAACTAAATAA
Upstream 100 bases:
>100_bases CAAACTGTATGAGTCAGGAAGACTCTTGCATTAAATTCGCATGAACCCCTGCTTATACAACAATCGTGCCCCTTTATATG CACTTACAAGGATGTCAATC
Downstream 100 bases:
>100_bases AATTTATTAGATAACAAGCTATTAAATAACAAGAGTTAAACAAAAGATGAAGGACTATTTTTTATGATAACAAATGATAA TGGATTAGTGATTCCAACCC
Product: class V aminotransferase
Products: NA
Alternate protein names: SGAT [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MSLQNPIFIPGPTNIPDRLRRAMNVPTQDHRAPDFSDTFLPVLADCKKVFGTQDGEIILFTSSGTGGWEAAISNTLSPGD KVLIARYGMFSHRWIDMCQRHGLDVQVVECDWGTGAPADKFQAILNEDTAHEIKAVMVTHNETATGVLSDIGAVRKAMDS SDHPALLFVDGVSSIACVPFEMDAWGVDVAVAGSQKGFMLATGMAILGVSQKALSHMDEAKLPRTYFAFRDMLNANANGG FPYTPPLNLIYGLRESLEMLFDEGLDNVYARHYRLAEGVRQAVSAWGMKLCAKTPDLYSNTVSAIFVPEGFDSNKLTDHA FNKYGISFGIGLGEMNGKAFRIGHLGSLTEVMVLAGLATIEMAMVDLGYPIKLGQGVAAAQEYYRHSAPTK
Sequences:
>Translated_391_residues MSLQNPIFIPGPTNIPDRLRRAMNVPTQDHRAPDFSDTFLPVLADCKKVFGTQDGEIILFTSSGTGGWEAAISNTLSPGD KVLIARYGMFSHRWIDMCQRHGLDVQVVECDWGTGAPADKFQAILNEDTAHEIKAVMVTHNETATGVLSDIGAVRKAMDS SDHPALLFVDGVSSIACVPFEMDAWGVDVAVAGSQKGFMLATGMAILGVSQKALSHMDEAKLPRTYFAFRDMLNANANGG FPYTPPLNLIYGLRESLEMLFDEGLDNVYARHYRLAEGVRQAVSAWGMKLCAKTPDLYSNTVSAIFVPEGFDSNKLTDHA FNKYGISFGIGLGEMNGKAFRIGHLGSLTEVMVLAGLATIEMAMVDLGYPIKLGQGVAAAQEYYRHSAPTK >Mature_390_residues SLQNPIFIPGPTNIPDRLRRAMNVPTQDHRAPDFSDTFLPVLADCKKVFGTQDGEIILFTSSGTGGWEAAISNTLSPGDK VLIARYGMFSHRWIDMCQRHGLDVQVVECDWGTGAPADKFQAILNEDTAHEIKAVMVTHNETATGVLSDIGAVRKAMDSS DHPALLFVDGVSSIACVPFEMDAWGVDVAVAGSQKGFMLATGMAILGVSQKALSHMDEAKLPRTYFAFRDMLNANANGGF PYTPPLNLIYGLRESLEMLFDEGLDNVYARHYRLAEGVRQAVSAWGMKLCAKTPDLYSNTVSAIFVPEGFDSNKLTDHAF NKYGISFGIGLGEMNGKAFRIGHLGSLTEVMVLAGLATIEMAMVDLGYPIKLGQGVAAAQEYYRHSAPTK
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=353, Percent_Identity=28.8951841359773, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17536281, Length=346, Percent_Identity=26.0115606936416, Blast_Score=127, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6321079, Length=359, Percent_Identity=27.8551532033426, Blast_Score=137, Evalue=3e-33, Organism=Drosophila melanogaster, GI17530823, Length=366, Percent_Identity=29.2349726775956, Blast_Score=152, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.45 [H]
Molecular weight: Translated: 42437; Mature: 42306
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQNPIFIPGPTNIPDRLRRAMNVPTQDHRAPDFSDTFLPVLADCKKVFGTQDGEIILF CCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE TSSGTGGWEAAISNTLSPGDKVLIARYGMFSHRWIDMCQRHGLDVQVVECDWGTGAPADK ECCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHH FQAILNEDTAHEIKAVMVTHNETATGVLSDIGAVRKAMDSSDHPALLFVDGVSSIACVPF HHHHHCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE EMDAWGVDVAVAGSQKGFMLATGMAILGVSQKALSHMDEAKLPRTYFAFRDMLNANANGG ECCCCCEEEEEECCCCCEEEECCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC FPYTPPLNLIYGLRESLEMLFDEGLDNVYARHYRLAEGVRQAVSAWGMKLCAKTPDLYSN CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCC TVSAIFVPEGFDSNKLTDHAFNKYGISFGIGLGEMNGKAFRIGHLGSLTEVMVLAGLATI CEEEEEEECCCCCCCCCHHHHHHCCCEEECCEECCCCCEEEEECCCHHHHHHHHHHHHHH EMAMVDLGYPIKLGQGVAAAQEYYRHSAPTK HHHHHHCCCCEECCCCHHHHHHHHHHCCCCC >Mature Secondary Structure SLQNPIFIPGPTNIPDRLRRAMNVPTQDHRAPDFSDTFLPVLADCKKVFGTQDGEIILF CCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE TSSGTGGWEAAISNTLSPGDKVLIARYGMFSHRWIDMCQRHGLDVQVVECDWGTGAPADK ECCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHH FQAILNEDTAHEIKAVMVTHNETATGVLSDIGAVRKAMDSSDHPALLFVDGVSSIACVPF HHHHHCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE EMDAWGVDVAVAGSQKGFMLATGMAILGVSQKALSHMDEAKLPRTYFAFRDMLNANANGG ECCCCCEEEEEECCCCCEEEECCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC FPYTPPLNLIYGLRESLEMLFDEGLDNVYARHYRLAEGVRQAVSAWGMKLCAKTPDLYSN CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCC TVSAIFVPEGFDSNKLTDHAFNKYGISFGIGLGEMNGKAFRIGHLGSLTEVMVLAGLATI CEEEEEEECCCCCCCCCHHHHHHCCCEEECCEECCCCCEEEEECCCHHHHHHHHHHHHHH EMAMVDLGYPIKLGQGVAAAQEYYRHSAPTK HHHHHHCCCCEECCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8898880 [H]