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The map label for this gene is ynjF [H]

Identifier: 93005801

GI number: 93005801

Start: 1159328

End: 1159987

Strand: Reverse

Name: ynjF [H]

Synonym: Pcryo_0973

Alternate gene names: 93005801

Gene position: 1159987-1159328 (Counterclockwise)

Preceding gene: 93005802

Following gene: 93005800

Centisome position: 37.91

GC content: 41.36

Gene sequence:

>660_bases
ATGCTCGATAAGTTTATTACCCCCATCATCAAGCCTCTATTAGAGCCATTGGTCGTACTATTTTATAAGGGTGGTATTAC
CGCAAATCAGTTGACTGTCACTGGTTTTCTCATTGGTATGTTGGCGTTGCCATTGATTGCTTTTGAGCTGTGGAATGCAG
CACTAATTGCTATTATATTGAACCGTGTTTTTGATGGATTAGATGGTGCACTGGCACGTTATGCTGGCCAAAGCTCAAGT
GCGGGCGGCTATTTAGACATTACCCTAGATTTTTTATTCTATGCAGCGGTGCCACTCGGCTTTGTATTGGTTAATCCCGA
GCAAAACGCTATTGTAGGCGCATTGTTATTAGCCGCCTTTATTGGCACTGGCTCTAGCTTTTTGGCCTTTGCTATTGCAG
CTGAAAAATTCCAATTAGATAAGCCGCAATTTAAATATAAGAGCTTTTATTATCTAAATGGTCTCACTGAGGGTACTGAA
ACCATTGTTTTATTTATCGCCTTTTGTATTTGGCCACAGCACTTTGTGGTATTAGCAAGTATTTTTGCAGCGGCCTGTGC
GGTTACTATTATGACTCGTATATATGGCGGTTATCATACGCTTAAACGGCTCGAAACCGATATACATAAGCCCATTAAGG
AGGTCAGTAATGGCGAATGA

Upstream 100 bases:

>100_bases
CTTTTGATAAAATAAAAAGCTTGATAAACAATACTTAGAAACCAGTATAAAAAGTGCGACTGCTTGCTTCTAAAAGAATG
ACGATACAAAAGGCAAAAAT

Downstream 100 bases:

>100_bases
GATGTGGTGGCGTTTGGGCTTTTTCTTTAGCATATTGGTCATTATGATGCTCATTGAGCATAGGCATCCCGCACGTCAAT
CACCAATTAAGAGTAGCACA

Product: CDP-alcohol phosphatidyltransferase

Products: CMP; 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MLDKFITPIIKPLLEPLVVLFYKGGITANQLTVTGFLIGMLALPLIAFELWNAALIAIILNRVFDGLDGALARYAGQSSS
AGGYLDITLDFLFYAAVPLGFVLVNPEQNAIVGALLLAAFIGTGSSFLAFAIAAEKFQLDKPQFKYKSFYYLNGLTEGTE
TIVLFIAFCIWPQHFVVLASIFAAACAVTIMTRIYGGYHTLKRLETDIHKPIKEVSNGE

Sequences:

>Translated_219_residues
MLDKFITPIIKPLLEPLVVLFYKGGITANQLTVTGFLIGMLALPLIAFELWNAALIAIILNRVFDGLDGALARYAGQSSS
AGGYLDITLDFLFYAAVPLGFVLVNPEQNAIVGALLLAAFIGTGSSFLAFAIAAEKFQLDKPQFKYKSFYYLNGLTEGTE
TIVLFIAFCIWPQHFVVLASIFAAACAVTIMTRIYGGYHTLKRLETDIHKPIKEVSNGE
>Mature_219_residues
MLDKFITPIIKPLLEPLVVLFYKGGITANQLTVTGFLIGMLALPLIAFELWNAALIAIILNRVFDGLDGALARYAGQSSS
AGGYLDITLDFLFYAAVPLGFVLVNPEQNAIVGALLLAAFIGTGSSFLAFAIAAEKFQLDKPQFKYKSFYYLNGLTEGTE
TIVLFIAFCIWPQHFVVLASIFAAACAVTIMTRIYGGYHTLKRLETDIHKPIKEVSNGE

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=205, Percent_Identity=58.0487804878049, Blast_Score=211, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: 2.7.8.5

Molecular weight: Translated: 23894; Mature: 23894

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKFITPIIKPLLEPLVVLFYKGGITANQLTVTGFLIGMLALPLIAFELWNAALIAIIL
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRVFDGLDGALARYAGQSSSAGGYLDITLDFLFYAAVPLGFVLVNPEQNAIVGALLLAAF
HHHHHCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHH
IGTGSSFLAFAIAAEKFQLDKPQFKYKSFYYLNGLTEGTETIVLFIAFCIWPQHFVVLAS
HCCCHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
IFAAACAVTIMTRIYGGYHTLKRLETDIHKPIKEVSNGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDKFITPIIKPLLEPLVVLFYKGGITANQLTVTGFLIGMLALPLIAFELWNAALIAIIL
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRVFDGLDGALARYAGQSSSAGGYLDITLDFLFYAAVPLGFVLVNPEQNAIVGALLLAAF
HHHHHCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHH
IGTGSSFLAFAIAAEKFQLDKPQFKYKSFYYLNGLTEGTETIVLFIAFCIWPQHFVVLAS
HCCCHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
IFAAACAVTIMTRIYGGYHTLKRLETDIHKPIKEVSNGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CDPdiacylglycerol; sn-glycerol 3-phosphate

Specific reaction: CDP-diacylglycerol + sn-glycerol 3-phosphate = CMP + 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]