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The map label for this gene is 93005800

Identifier: 93005800

GI number: 93005800

Start: 1158520

End: 1159338

Strand: Reverse

Name: 93005800

Synonym: Pcryo_0972

Alternate gene names: NA

Gene position: 1159338-1158520 (Counterclockwise)

Preceding gene: 93005801

Following gene: 93005799

Centisome position: 37.89

GC content: 41.64

Gene sequence:

>819_bases
ATGGCGAATGAGATGTGGTGGCGTTTGGGCTTTTTCTTTAGCATATTGGTCATTATGATGCTCATTGAGCATAGGCATCC
CGCACGTCAATCACCAATTAAGAGTAGCACACGTTGGTTTGCTAATCTTGGATTGGTATTTGCCTCTTCTTTTGTTGCGC
GTTTGGCAGTCCCCATTGGGCTGACAACGGTCGCCATTTATAATCAAGAAAACGGTATCGGTTTATTTAATTTAATTGAG
ATACCGAATATCGCGGCTATTATTTTAAGCTTATTGTTGCTTGATATGGTTATCTACTGGCAGCATCGTTTATTTCATCG
AGTGCCGATTCTCTGGCGCTTGCACCGTGTCCATCACGCTGATTCGCATATCGATGCCAGCACTGGGCTTAGATTTCATC
CTATCGAAATTGTCTTAAGCATATTGCTTAAGCTTGTTGTCATTAGTGTGCTTGGTGTCCCTGCTATCGTGGTACTTATA
TTCGAGATTGCCTTAAATGGGTTGGCTATGTTTAATCATGCCAATATTCGTCTGCCACCAGTGATTGAGAAGCCTTTACG
CATGATTCTAGTCACGCAAGTCTTACACCGTATTCATCACAGCCAACGGGCCAGTGAGACCAACTCCAATTATGGCTTTA
GTGTGACTTGGTGGGATTGGCTTTTTGGTAGTTATAAAAGCCAAGGATTCAAACCTGATCAAGCATTAGATATTGGTTTA
AAAGAGTATCCCGATGCCAAGCAAAATGCCTCGCTATGGGGATTGTTGCTCATGCCTTTTAAAAATAAACCTTCTATAAA
TCAATCCAATCAAAAATAA

Upstream 100 bases:

>100_bases
GCGGCCTGTGCGGTTACTATTATGACTCGTATATATGGCGGTTATCATACGCTTAAACGGCTCGAAACCGATATACATAA
GCCCATTAAGGAGGTCAGTA

Downstream 100 bases:

>100_bases
ATGCAGCATCTAACCATCACTAAACGGGTAATATGGACTATTAATTGCTAGCAAAACCTTTAATTGTTAACCAGCGTTAC
AAATATTTGAGCAATCATTC

Product: putative sterol desaturase

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase-Related Protein; Sterol Desaturase-Like Protein; C-5 Sterol Desaturase; Sterol Desaturase -Like Protein; Transmembrane Protein; Sterol Desaturase Family Protein; Sterol Desaturate; Fatty Acid Hydroxylase Superfamily Protein; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MANEMWWRLGFFFSILVIMMLIEHRHPARQSPIKSSTRWFANLGLVFASSFVARLAVPIGLTTVAIYNQENGIGLFNLIE
IPNIAAIILSLLLLDMVIYWQHRLFHRVPILWRLHRVHHADSHIDASTGLRFHPIEIVLSILLKLVVISVLGVPAIVVLI
FEIALNGLAMFNHANIRLPPVIEKPLRMILVTQVLHRIHHSQRASETNSNYGFSVTWWDWLFGSYKSQGFKPDQALDIGL
KEYPDAKQNASLWGLLLMPFKNKPSINQSNQK

Sequences:

>Translated_272_residues
MANEMWWRLGFFFSILVIMMLIEHRHPARQSPIKSSTRWFANLGLVFASSFVARLAVPIGLTTVAIYNQENGIGLFNLIE
IPNIAAIILSLLLLDMVIYWQHRLFHRVPILWRLHRVHHADSHIDASTGLRFHPIEIVLSILLKLVVISVLGVPAIVVLI
FEIALNGLAMFNHANIRLPPVIEKPLRMILVTQVLHRIHHSQRASETNSNYGFSVTWWDWLFGSYKSQGFKPDQALDIGL
KEYPDAKQNASLWGLLLMPFKNKPSINQSNQK
>Mature_271_residues
ANEMWWRLGFFFSILVIMMLIEHRHPARQSPIKSSTRWFANLGLVFASSFVARLAVPIGLTTVAIYNQENGIGLFNLIEI
PNIAAIILSLLLLDMVIYWQHRLFHRVPILWRLHRVHHADSHIDASTGLRFHPIEIVLSILLKLVVISVLGVPAIVVLIF
EIALNGLAMFNHANIRLPPVIEKPLRMILVTQVLHRIHHSQRASETNSNYGFSVTWWDWLFGSYKSQGFKPDQALDIGLK
EYPDAKQNASLWGLLLMPFKNKPSINQSNQK

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31119; Mature: 30988

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANEMWWRLGFFFSILVIMMLIEHRHPARQSPIKSSTRWFANLGLVFASSFVARLAVPIG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTTVAIYNQENGIGLFNLIEIPNIAAIILSLLLLDMVIYWQHRLFHRVPILWRLHRVHHA
CEEEEEEECCCCCCEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSHIDASTGLRFHPIEIVLSILLKLVVISVLGVPAIVVLIFEIALNGLAMFNHANIRLPP
CCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCH
VIEKPLRMILVTQVLHRIHHSQRASETNSNYGFSVTWWDWLFGSYKSQGFKPDQALDIGL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCHHHHCCH
KEYPDAKQNASLWGLLLMPFKNKPSINQSNQK
HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
ANEMWWRLGFFFSILVIMMLIEHRHPARQSPIKSSTRWFANLGLVFASSFVARLAVPIG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTTVAIYNQENGIGLFNLIEIPNIAAIILSLLLLDMVIYWQHRLFHRVPILWRLHRVHHA
CEEEEEEECCCCCCEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSHIDASTGLRFHPIEIVLSILLKLVVISVLGVPAIVVLIFEIALNGLAMFNHANIRLPP
CCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCH
VIEKPLRMILVTQVLHRIHHSQRASETNSNYGFSVTWWDWLFGSYKSQGFKPDQALDIGL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCHHHHCCH
KEYPDAKQNASLWGLLLMPFKNKPSINQSNQK
HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA