| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005799
Identifier: 93005799
GI number: 93005799
Start: 1157691
End: 1158245
Strand: Reverse
Name: 93005799
Synonym: Pcryo_0971
Alternate gene names: NA
Gene position: 1158245-1157691 (Counterclockwise)
Preceding gene: 93005800
Following gene: 93005798
Centisome position: 37.85
GC content: 42.7
Gene sequence:
>555_bases ATGACTGACTTTACATTACATGACAAACAAAGCGCGCCAGCAGAAAGCACAGCATTACTTGATGTCTCAATCAATGCATT TGGTATGGTTCCAAACTTACATGCCGTAATGGCTGAAGCGCCTGGATTGCTTGAAGGCTACCAACGTCTACATCAACTGT TCTTAGACAGCAGCTTTGATGACGAAGAGACTACGGTAGTATGGCAAACCATCAACGTCGAGCATGAATGTCATTATTGT GTGCCAGCTCATACTGGTATTGCCAAAAGCATGAAAGTCGATGATGCTATCACTGATGCATTACGTGACGAGACGCCACT ACCAACTGCAAAACTAGAAGCTTTACGTGACTTTACTCTATCTGTGGTTCGTGATCGTGGCAACGTCAATGATGACACTG TACAAACGTTTTTGGACGCAGGATTTACTAAGCGTCAAGTGCTAGAAGTGGTATTAGCAACAGCACAGAAAGTAATGAGT AACTACACCAACCATCTCGCTAATACACCAATCGATAAGCCTTTTCAAAAATTTGAATGGCACAAAGCAGACTAA
Upstream 100 bases:
>100_bases ATAATAAGTTTTAACTTTAATCACATATCATCATTGTTTTTCAACCTGAATGATTGAATAAAATTTTAATACTGTTACTA ATACCAAATAGGAATTATAT
Downstream 100 bases:
>100_bases CAGCACAGACTAGTTGAGCAAAGAATTTCGTATAAAATCGAAGGAGATATTGTGATGAGTATAATAGCCCCACTGCGCAT CGATATTGTATCGGACGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Peroxidase-Related; Alkylhydroperoxidase AhpD Family Core Domain Protein; Alkylhydroperoxidase AhpD Domain Protein; 4-Carboxymuconolactone Decarboxylase; Macrophage Infectivity Potentiator Protein; Mip Protein; Ypothetical Protein SMU.; MIP-(Macrophage Infectivity Potentiator)-Like Protein; AhpD-Like Alkylhydroperoxidase; Macrophage Infectivity Potentiator-Related Protein; Peroxidase; Alkylhydroperoxidase AhpD Family Protein; Alkylhydroperoxidase-Like Protein AhpD Family; AhpD Family Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Family Core Domain Protein MED; Peroxidase-Like Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTDFTLHDKQSAPAESTALLDVSINAFGMVPNLHAVMAEAPGLLEGYQRLHQLFLDSSFDDEETTVVWQTINVEHECHYC VPAHTGIAKSMKVDDAITDALRDETPLPTAKLEALRDFTLSVVRDRGNVNDDTVQTFLDAGFTKRQVLEVVLATAQKVMS NYTNHLANTPIDKPFQKFEWHKAD
Sequences:
>Translated_184_residues MTDFTLHDKQSAPAESTALLDVSINAFGMVPNLHAVMAEAPGLLEGYQRLHQLFLDSSFDDEETTVVWQTINVEHECHYC VPAHTGIAKSMKVDDAITDALRDETPLPTAKLEALRDFTLSVVRDRGNVNDDTVQTFLDAGFTKRQVLEVVLATAQKVMS NYTNHLANTPIDKPFQKFEWHKAD >Mature_183_residues TDFTLHDKQSAPAESTALLDVSINAFGMVPNLHAVMAEAPGLLEGYQRLHQLFLDSSFDDEETTVVWQTINVEHECHYCV PAHTGIAKSMKVDDAITDALRDETPLPTAKLEALRDFTLSVVRDRGNVNDDTVQTFLDAGFTKRQVLEVVLATAQKVMSN YTNHLANTPIDKPFQKFEWHKAD
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20572; Mature: 20441
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFTLHDKQSAPAESTALLDVSINAFGMVPNLHAVMAEAPGLLEGYQRLHQLFLDSSFD CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCC DEETTVVWQTINVEHECHYCVPAHTGIAKSMKVDDAITDALRDETPLPTAKLEALRDFTL CCCEEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SVVRDRGNVNDDTVQTFLDAGFTKRQVLEVVLATAQKVMSNYTNHLANTPIDKPFQKFEW HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC HKAD CCCC >Mature Secondary Structure TDFTLHDKQSAPAESTALLDVSINAFGMVPNLHAVMAEAPGLLEGYQRLHQLFLDSSFD CCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCC DEETTVVWQTINVEHECHYCVPAHTGIAKSMKVDDAITDALRDETPLPTAKLEALRDFTL CCCEEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SVVRDRGNVNDDTVQTFLDAGFTKRQVLEVVLATAQKVMSNYTNHLANTPIDKPFQKFEW HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC HKAD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA