| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is ywbO [H]
Identifier: 93005798
GI number: 93005798
Start: 1156986
End: 1157636
Strand: Reverse
Name: ywbO [H]
Synonym: Pcryo_0970
Alternate gene names: 93005798
Gene position: 1157636-1156986 (Counterclockwise)
Preceding gene: 93005799
Following gene: 93005796
Centisome position: 37.83
GC content: 47.0
Gene sequence:
>651_bases ATGAGTATAATAGCCCCACTGCGCATCGATATTGTATCGGACGTGGTTTGCCCTTGGTGCGCTATAGGCTATGGACAGTT GGCCGAAGCACTCAAAAAAACCAATACTGAGTACGAGATTCATTGGCATCCGTTTGAGCTTAATCCTGATACGCCGCACG AAGGACGAAACTATCGTGAGCATATCGCTAAGAAATACGGCTCAAGTCGAGAAGAATCTGATGCCAGCCGCGCTAAAATG ACTGAGGCTGGTCGTGAGGTTGGCTTTGCATTTAACTTTACTGAAGAGAGTCGCACTTATAATACCTTTGCTATGCATCA ACTACTGCACTGGGCCGATCAGCAAGGGTACGCGCATGATTTAAAGCAAGCCTTGTTCGCGGCTCACTTTACTCACGCTA GAGATATTTCTAACAAAGAAGTCTTAGCCGATATCGTGGCAGAGATTGGTTTAGATCGTAGTGAGGCGCTAGCGGTATTA GCAGACGAGCGCTTTGCTGAAGACGTCCGCCGTGCTCAGCAACAGTGGAGACAGCAAAGTATTCAAAGCGTACCTTCTGT TATCTTTAACCAAAAGCATCTGGTTAGCGGTGCTCAAGGGGTCGAGAACTTCAAAAGTATTTTGCAGCAATTAGCGGACA TGCCACAATAG
Upstream 100 bases:
>100_bases AATCGATAAGCCTTTTCAAAAATTTGAATGGCACAAAGCAGACTAACAGCACAGACTAGTTGAGCAAAGAATTTCGTATA AAATCGAAGGAGATATTGTG
Downstream 100 bases:
>100_bases ATGTATCTCTAATTAATAATAAAAACACACTGCAAAATTTAAAACTAAAAAGGCTACTTAATCTTTCAAGTAGCCTTTTT TTACACCTGCTATTATACAA
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSIIAPLRIDIVSDVVCPWCAIGYGQLAEALKKTNTEYEIHWHPFELNPDTPHEGRNYREHIAKKYGSSREESDASRAKM TEAGREVGFAFNFTEESRTYNTFAMHQLLHWADQQGYAHDLKQALFAAHFTHARDISNKEVLADIVAEIGLDRSEALAVL ADERFAEDVRRAQQQWRQQSIQSVPSVIFNQKHLVSGAQGVENFKSILQQLADMPQ
Sequences:
>Translated_216_residues MSIIAPLRIDIVSDVVCPWCAIGYGQLAEALKKTNTEYEIHWHPFELNPDTPHEGRNYREHIAKKYGSSREESDASRAKM TEAGREVGFAFNFTEESRTYNTFAMHQLLHWADQQGYAHDLKQALFAAHFTHARDISNKEVLADIVAEIGLDRSEALAVL ADERFAEDVRRAQQQWRQQSIQSVPSVIFNQKHLVSGAQGVENFKSILQQLADMPQ >Mature_215_residues SIIAPLRIDIVSDVVCPWCAIGYGQLAEALKKTNTEYEIHWHPFELNPDTPHEGRNYREHIAKKYGSSREESDASRAKMT EAGREVGFAFNFTEESRTYNTFAMHQLLHWADQQGYAHDLKQALFAAHFTHARDISNKEVLADIVAEIGLDRSEALAVLA DERFAEDVRRAQQQWRQQSIQSVPSVIFNQKHLVSGAQGVENFKSILQQLADMPQ
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 24582; Mature: 24451
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIAPLRIDIVSDVVCPWCAIGYGQLAEALKKTNTEYEIHWHPFELNPDTPHEGRNYRE CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHH HIAKKYGSSREESDASRAKMTEAGREVGFAFNFTEESRTYNTFAMHQLLHWADQQGYAHD HHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEECCHHCCHHHHHHHHHHHHHHHCCCHHHH LKQALFAAHFTHARDISNKEVLADIVAEIGLDRSEALAVLADERFAEDVRRAQQQWRQQS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQSVPSVIFNQKHLVSGAQGVENFKSILQQLADMPQ HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SIIAPLRIDIVSDVVCPWCAIGYGQLAEALKKTNTEYEIHWHPFELNPDTPHEGRNYRE CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHH HIAKKYGSSREESDASRAKMTEAGREVGFAFNFTEESRTYNTFAMHQLLHWADQQGYAHD HHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEECCHHCCHHHHHHHHHHHHHHHCCCHHHH LKQALFAAHFTHARDISNKEVLADIVAEIGLDRSEALAVLADERFAEDVRRAQQQWRQQS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQSVPSVIFNQKHLVSGAQGVENFKSILQQLADMPQ HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]