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The map label for this gene is 93005796

Identifier: 93005796

GI number: 93005796

Start: 1155167

End: 1155862

Strand: Reverse

Name: 93005796

Synonym: Pcryo_0968

Alternate gene names: NA

Gene position: 1155862-1155167 (Counterclockwise)

Preceding gene: 93005798

Following gene: 93005795

Centisome position: 37.77

GC content: 47.7

Gene sequence:

>696_bases
ATGTCCTATATCTACTCAGCTCCGATTATCGTATTCGATGTCAACGAAACCTTACTCGATATCGATACGCTCACGCCCTT
ATTCACGCGTTTATTTGGGGATAATAACAGACTCCGAGAGTGGTTCGCGCAATTGGTACTTTATTCGCAAACCATGACTT
TATCTGGTCTTTATACACCTTTTGGCGAGCTTGGCGTTGGTGCTTTACAAATGACCGCAGATATTCATGCCGTTACGCTA
ACAGAAGAAGATGTTCAGGAGTTTAAGCAGCGCATGAGTGAGATGCCAGCTCACCCTGACGCTATCCCTGCTTTGACCAA
ACTACGTGATGCAGGATTTAGATTGGTGACCTTGACCAACTCAGCACCCAGCGCCTCTCCGACACCGCTTGAAAAAGCAG
GACTGAGTGAATTCTTTGAGCGGAATTTTAGTGTTGCAAACGTCAGCCAATTTAAACCTGCACCGGCGACATATCAGATG
GTCGCTCGCGAGCTGTCCGTTGAGACCTCAGAGCTATGTCTTGTCGCCTGTCACCTCTGGGATGTCATCGGTGCTCAAGC
TGCTGGCTGCCAAGGGGCTTTTATCACTCGACCTTATAACGCGCTACTTTCGGCACCCAATGTACCAAAACCCGACTTTA
TCGCTTCAGACCTCATCACCCTCGCTGAACACATTATTAAACATCAAAGCTCTTAA

Upstream 100 bases:

>100_bases
CGCAGACAGAGGCTGCGAATAATTAACCCCAGTAGCTCTGTACCCTTTTAAAAGTGGATTAGCTATAGTAAGGCTTACTT
TTATTGCAAAAGGAACTTTT

Downstream 100 bases:

>100_bases
GCGGGTGAACAAGAATCTACGGCAATTATTCTAAAAAGGTATGTGACTCAATTATCTGACAAACGATTTTTCAATAAAAA
CTTTGGGATTGCCGTATTTG

Product: haloacid dehalogenase, type II

Products: NA

Alternate protein names: 2-haloalkanoic acid dehalogenase I; DEHCI; Halocarboxylic acid halidohydrolase I; L-2-haloacid dehalogenase I [H]

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSYIYSAPIIVFDVNETLLDIDTLTPLFTRLFGDNNRLREWFAQLVLYSQTMTLSGLYTPFGELGVGALQMTADIHAVTL
TEEDVQEFKQRMSEMPAHPDAIPALTKLRDAGFRLVTLTNSAPSASPTPLEKAGLSEFFERNFSVANVSQFKPAPATYQM
VARELSVETSELCLVACHLWDVIGAQAAGCQGAFITRPYNALLSAPNVPKPDFIASDLITLAEHIIKHQSS

Sequences:

>Translated_231_residues
MSYIYSAPIIVFDVNETLLDIDTLTPLFTRLFGDNNRLREWFAQLVLYSQTMTLSGLYTPFGELGVGALQMTADIHAVTL
TEEDVQEFKQRMSEMPAHPDAIPALTKLRDAGFRLVTLTNSAPSASPTPLEKAGLSEFFERNFSVANVSQFKPAPATYQM
VARELSVETSELCLVACHLWDVIGAQAAGCQGAFITRPYNALLSAPNVPKPDFIASDLITLAEHIIKHQSS
>Mature_230_residues
SYIYSAPIIVFDVNETLLDIDTLTPLFTRLFGDNNRLREWFAQLVLYSQTMTLSGLYTPFGELGVGALQMTADIHAVTLT
EEDVQEFKQRMSEMPAHPDAIPALTKLRDAGFRLVTLTNSAPSASPTPLEKAGLSEFFERNFSVANVSQFKPAPATYQMV
ARELSVETSELCLVACHLWDVIGAQAAGCQGAFITRPYNALLSAPNVPKPDFIASDLITLAEHIIKHQSS

Specific function: Catalyzes the hydrolytic dehalogenation of small (S)-2- haloalkanoic acids to yield the corresponding (R)-2- hydroxyalkanoic acids. Acts on acids of short chain lengths, C(2) to C(4), with inversion of configuration at C-2 [H]

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. S-2- haloalkanoic acid dehalogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006388
- InterPro:   IPR006328
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.8.1.2 [H]

Molecular weight: Translated: 25413; Mature: 25282

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYIYSAPIIVFDVNETLLDIDTLTPLFTRLFGDNNRLREWFAQLVLYSQTMTLSGLYTP
CCEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
FGELGVGALQMTADIHAVTLTEEDVQEFKQRMSEMPAHPDAIPALTKLRDAGFRLVTLTN
HHHHCCCHHEEECCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEEC
SAPSASPTPLEKAGLSEFFERNFSVANVSQFKPAPATYQMVARELSVETSELCLVACHLW
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
DVIGAQAAGCQGAFITRPYNALLSAPNVPKPDFIASDLITLAEHIIKHQSS
HHHCCCCCCCCCCEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SYIYSAPIIVFDVNETLLDIDTLTPLFTRLFGDNNRLREWFAQLVLYSQTMTLSGLYTP
CEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
FGELGVGALQMTADIHAVTLTEEDVQEFKQRMSEMPAHPDAIPALTKLRDAGFRLVTLTN
HHHHCCCHHEEECCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEEC
SAPSASPTPLEKAGLSEFFERNFSVANVSQFKPAPATYQMVARELSVETSELCLVACHLW
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
DVIGAQAAGCQGAFITRPYNALLSAPNVPKPDFIASDLITLAEHIIKHQSS
HHHCCCCCCCCCCEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1995594 [H]