| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005751
Identifier: 93005751
GI number: 93005751
Start: 1095438
End: 1096367
Strand: Reverse
Name: 93005751
Synonym: Pcryo_0923
Alternate gene names: NA
Gene position: 1096367-1095438 (Counterclockwise)
Preceding gene: 93005752
Following gene: 93005750
Centisome position: 35.83
GC content: 29.03
Gene sequence:
>930_bases ATGAGTTCAGGAAAATCCACACTTATTAATTCAATGTTAGGAAAAGAGCTGCTCCATTGTGCTAACGAAGCGACAACAGC GACTATAACGAGAATACACAATAAGGACCAGCAGAATAACTTTAATGGTTCCGCATATAATTTTGAACCTATTAAATCAA ATGAAAAAGCAAGATTGAAGTTTCTAGACTATAAGAGTGTTATTGATAGTGAAACATTGAAAAAATGGAATGCGGATAAC AATATCAACTATATTAGTCTAACCGGTAATATCCCTTCTATAAAAAACTCTAGTAAGCACATTGTATTGTATGACTCACC AGGTCCTAATAATAGCCAAGATAATACACATCAAGACTTAACCTTGAACTTAGTAAGCGATGGTCGTTATGGAATGATTA TCTATGTATTAAACGCTACTCAAATTGGCATTAATGACGATAAGCTATTTTTATCACAGATAAGTCAGGTTTTAAAAACT GATAAGCATAAAAATATTATATTTATACTTAATAAAGCAGACGTTTTAGATGAAGAAAAAGGTGAGGATATTGAAATTTT TGTAAGAAACATAGCTTCTTATTTAAAAAACATTGGTTTCATAAACCCTAGTATTATACCAGTATCTGCACTTTCTGCAT TAAATGCTAGAAAAGTATTAAATAAAGAACCTCTTACTCGATTTGAACGTAATTTGCTACAACAAAACATACATAACCTT GATGATGATAGACTTATAAGAGCCTCTTATAATATATCTGATGAAGTAAAAACTATATCATTACCGAATACAGAAAAAAA AGATATGTCTATTACGATCAAAGATGGGTTAGAAATATCAAAAAGTAAAATCAATCAACTAATTTATTTTAGCGGTATAC CTTTATTAGAAAACATTATTAATTATAAATTTCAAAAAACCACTTTATAA
Upstream 100 bases:
>100_bases AATCACTATAAGTAAGTATTTAATAGGAAACTAGATTGTGGCAAAAAACAAGAGAAGTAAGTCAGTAGTGAGTTTTTTCG AAATTATTGTTGTAGCGACG
Downstream 100 bases:
>100_bases AACTAATGGAGTATTTTATGATTAACGTAGCTATCACACACAATCCTTTTACAGTTGAGACTTTCTTTCTCATCGATGAC CAAAAACCTGAGAGTAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSSGKSTLINSMLGKELLHCANEATTATITRIHNKDQQNNFNGSAYNFEPIKSNEKARLKFLDYKSVIDSETLKKWNADN NINYISLTGNIPSIKNSSKHIVLYDSPGPNNSQDNTHQDLTLNLVSDGRYGMIIYVLNATQIGINDDKLFLSQISQVLKT DKHKNIIFILNKADVLDEEKGEDIEIFVRNIASYLKNIGFINPSIIPVSALSALNARKVLNKEPLTRFERNLLQQNIHNL DDDRLIRASYNISDEVKTISLPNTEKKDMSITIKDGLEISKSKINQLIYFSGIPLLENIINYKFQKTTL
Sequences:
>Translated_309_residues MSSGKSTLINSMLGKELLHCANEATTATITRIHNKDQQNNFNGSAYNFEPIKSNEKARLKFLDYKSVIDSETLKKWNADN NINYISLTGNIPSIKNSSKHIVLYDSPGPNNSQDNTHQDLTLNLVSDGRYGMIIYVLNATQIGINDDKLFLSQISQVLKT DKHKNIIFILNKADVLDEEKGEDIEIFVRNIASYLKNIGFINPSIIPVSALSALNARKVLNKEPLTRFERNLLQQNIHNL DDDRLIRASYNISDEVKTISLPNTEKKDMSITIKDGLEISKSKINQLIYFSGIPLLENIINYKFQKTTL >Mature_308_residues SSGKSTLINSMLGKELLHCANEATTATITRIHNKDQQNNFNGSAYNFEPIKSNEKARLKFLDYKSVIDSETLKKWNADNN INYISLTGNIPSIKNSSKHIVLYDSPGPNNSQDNTHQDLTLNLVSDGRYGMIIYVLNATQIGINDDKLFLSQISQVLKTD KHKNIIFILNKADVLDEEKGEDIEIFVRNIASYLKNIGFINPSIIPVSALSALNARKVLNKEPLTRFERNLLQQNIHNLD DDRLIRASYNISDEVKTISLPNTEKKDMSITIKDGLEISKSKINQLIYFSGIPLLENIINYKFQKTTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34947; Mature: 34816
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGKSTLINSMLGKELLHCANEATTATITRIHNKDQQNNFNGSAYNFEPIKSNEKARLK CCCCHHHHHHHHHHHHHHHHCCCCHHEEEEEHHCCCCCCCCCCCEEEECCCCCCCCEEEE FLDYKSVIDSETLKKWNADNNINYISLTGNIPSIKNSSKHIVLYDSPGPNNSQDNTHQDL EECHHHHHCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCE TLNLVSDGRYGMIIYVLNATQIGINDDKLFLSQISQVLKTDKHKNIIFILNKADVLDEEK EEEEECCCCEEEEEEEEECEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC GEDIEIFVRNIASYLKNIGFINPSIIPVSALSALNARKVLNKEPLTRFERNLLQQNIHNL CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC DDDRLIRASYNISDEVKTISLPNTEKKDMSITIKDGLEISKSKINQLIYFSGIPLLENII CCCCEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHCEEEEECCCHHHHHHH NYKFQKTTL CCCEEECCC >Mature Secondary Structure SSGKSTLINSMLGKELLHCANEATTATITRIHNKDQQNNFNGSAYNFEPIKSNEKARLK CCCHHHHHHHHHHHHHHHHCCCCHHEEEEEHHCCCCCCCCCCCEEEECCCCCCCCEEEE FLDYKSVIDSETLKKWNADNNINYISLTGNIPSIKNSSKHIVLYDSPGPNNSQDNTHQDL EECHHHHHCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCE TLNLVSDGRYGMIIYVLNATQIGINDDKLFLSQISQVLKTDKHKNIIFILNKADVLDEEK EEEEECCCCEEEEEEEEECEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC GEDIEIFVRNIASYLKNIGFINPSIIPVSALSALNARKVLNKEPLTRFERNLLQQNIHNL CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC DDDRLIRASYNISDEVKTISLPNTEKKDMSITIKDGLEISKSKINQLIYFSGIPLLENII CCCCEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHCEEEEECCCHHHHHHH NYKFQKTTL CCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA