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The map label for this gene is yaeJ [C]

Identifier: 93005695

GI number: 93005695

Start: 1026942

End: 1027355

Strand: Direct

Name: yaeJ [C]

Synonym: Pcryo_0867

Alternate gene names: 93005695

Gene position: 1026942-1027355 (Clockwise)

Preceding gene: 93005693

Following gene: 93005697

Centisome position: 33.56

GC content: 41.3

Gene sequence:

>414_bases
ATGATTTTTATCAGCAATACCATTAGTCTAAATGACAGTGACGTAGAGATTAGCGCGATACGTGCGCAAGGCGCAGGCGG
ACAAAATGTCAATAAAGTATCTTCTGCGATTCATTTGCGTTTCGATATTCATGCCTCAAGCTTGAGTGATGTAAATAAGC
AGCGACTACTTGATAGTAAAGACAGCCGAATTAGCAAAGAAGGCGTGCTCATTATTAAGGCGCAGCAATTTCGTACCCAA
GAACGCAATAAAATTGATGCGTTTGAACGCTTACAAAGCTTTATCAACAAAGCTACTTACGTCAATAAAACACGCAGGCC
GACCAAACCGAGCAGAAATGCTAAGCGTAAACGTGTCGATCAAAAAACTCAGCGCGGTAAAACAAAAGTATTACGCGGTA
AGGTGGATTTTTAG

Upstream 100 bases:

>100_bases
AGACATGCGGATTTTTGAAGTGGGTGAGCTGGCAAGTGGCGAGGTAGCTGATAATGGTTTATCATTAATCATAACTATCA
ATTATTTATAAAAGCATCCT

Downstream 100 bases:

>100_bases
ATAGACTGATTTGAAGGTGGATTTTCATAATTAACCAAAAAGCAAAATGCCAGCCCATCTAAGTGGCTGGCATTTTTTAT
ATACTTATTTGCTATCAGCT

Product: class I peptide chain release factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MIFISNTISLNDSDVEISAIRAQGAGGQNVNKVSSAIHLRFDIHASSLSDVNKQRLLDSKDSRISKEGVLIIKAQQFRTQ
ERNKIDAFERLQSFINKATYVNKTRRPTKPSRNAKRKRVDQKTQRGKTKVLRGKVDF

Sequences:

>Translated_137_residues
MIFISNTISLNDSDVEISAIRAQGAGGQNVNKVSSAIHLRFDIHASSLSDVNKQRLLDSKDSRISKEGVLIIKAQQFRTQ
ERNKIDAFERLQSFINKATYVNKTRRPTKPSRNAKRKRVDQKTQRGKTKVLRGKVDF
>Mature_137_residues
MIFISNTISLNDSDVEISAIRAQGAGGQNVNKVSSAIHLRFDIHASSLSDVNKQRLLDSKDSRISKEGVLIIKAQQFRTQ
ERNKIDAFERLQSFINKATYVNKTRRPTKPSRNAKRKRVDQKTQRGKTKVLRGKVDF

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=135, Percent_Identity=51.8518518518518, Blast_Score=147, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15570; Mature: 15570

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFISNTISLNDSDVEISAIRAQGAGGQNVNKVSSAIHLRFDIHASSLSDVNKQRLLDSK
CEEECCEEECCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEEECCCCHHHHHHHHHCCCC
DSRISKEGVLIIKAQQFRTQERNKIDAFERLQSFINKATYVNKTRRPTKPSRNAKRKRVD
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
QKTQRGKTKVLRGKVDF
HHHHCCCHHEECCCCCC
>Mature Secondary Structure
MIFISNTISLNDSDVEISAIRAQGAGGQNVNKVSSAIHLRFDIHASSLSDVNKQRLLDSK
CEEECCEEECCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEEECCCCHHHHHHHHHCCCC
DSRISKEGVLIIKAQQFRTQERNKIDAFERLQSFINKATYVNKTRRPTKPSRNAKRKRVD
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
QKTQRGKTKVLRGKVDF
HHHHCCCHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]