Click here to switch to the map view.

The map label for this gene is yhdG [H]

Identifier: 93005650

GI number: 93005650

Start: 969487

End: 970929

Strand: Direct

Name: yhdG [H]

Synonym: Pcryo_0820

Alternate gene names: 93005650

Gene position: 969487-970929 (Clockwise)

Preceding gene: 93005649

Following gene: 93005653

Centisome position: 31.68

GC content: 44.63

Gene sequence:

>1443_bases
ATGTCTGAATTAAAAAAATCGTTAGGGACGCTAGATGTTATCGCCTTAGCATTTGGTGCAATGGTCGGTTGGGGTTGGGT
CGTCTTGGCGGGCGGTTGGATTTTATCTGCTGGTACTTGGGGTGCGATGTTGGCATTCTTTATAGGTGGGCTGGCAGTGA
TACTGATTGGTGTGACTTATGCTGAGCTTGCGGCATCGATGCCCATCACTGGTGGTGAGCATACTTATACGCATCGAGCG
CTGGGAGTAAATGTCTCCTTTATCTGTTCATGGAGTATCCTATTTGGTTACTTCTCTGTGGTCGCGTTTGAGGCGGTCGC
TTTGCCTACAGTTGTAGAATATTTTATTCCTAATTATAATCAAGGTTATCTCTGGACCATTGCTGGATGGGATGTTTATG
CCACATGGGTAGGGGTTGGGATGCTAGGCTCCGTCATTGTAACGTGGCTAAATATACGCGGTATGGAAGTCAGTGCATGG
TTCCAAAAAACTGCAGTACTAGGTATTTTATTCGTCGGAACCTTGCTATTTATTGGTGCAGTGCTTTATAACCCTGAAAC
CTCTACAGCAATACAATCGCCAGCCTTCATTGGTGGTGTCGGTGGCATGATGGCCGTCATTGTCATGGTGCCCTTTATGT
TCGTGGGTTTTGACGTTATTCCACAAGCGGCAGAAGAGATTGATTTAACTCGTCCTAATATCGGTAAGTTTTTGATTATC
TCTATCGTCGTTGCGGTGATGTGGTATGTGGGTATCGCTTGGAGCGTGGGCACGACGTTGCCGCTTGTACAAGCAGAAAG
CTCAACCTTAGCCACAGCTGATGCCATGACCAATGCTTGGCAAGGCAAATGGGCAGGTATTTTACTGGTTATCGGCGGTG
TACTGGGTATTTTATCAAGCTGGAATGCGTTCTTAATTGGTGGTAGTCGTCTACTTTATGCGATGTCAAAAGCGCGCATG
TTGCCAGCTTTTTTAGGTAAGTTACATCCAAAATACAATACACCTTCGAATGCGATTCTCCTCATTGGTGGTTTAGCAAC
GCTAGCACCTTTATTTGGTCGCAAGATGTTGGTTTGGATCGTTGATGCTGGTGGTTTTGGTATCGTCATTGCCTATACCT
GTGTTGCTATTTCATTCTTGGTACTACGCTACCGCGAGCCTGATATGGTACGTCCCTTTAAGATACCAGCAGGTAAGCTT
GTCGGTATGATAACGATTGCGCTTAGCTTTGGTTTATTGATGCTATATATGCCAGGTATGCCATCAGCACTGACTGCTGT
TGAGTGGTGGATTTTCTTTGGCTGGACCGTCTTAGGTATTGTGTTATATAGCTATGCAAGGATTAAATATCCAGGTATTA
GTGAATCGATTATGGCAGAAGAGCTACGTGAATTAAAAATCGTCAATCAATTATGGTTAAAAGATAATCCACCTAAGCAA
TAG

Upstream 100 bases:

>100_bases
AATGCCCTGTTAAATAAAACCCTGTTATATAAAATACAGTGTCACTCTAAGTGTAATGAAAAAAGATTCACACGGATGAA
GCACGGACAAGGAGCAAGTT

Downstream 100 bases:

>100_bases
TTTTTTCGATGGGTTATTTTTTAATAAAATTGTCCTATAAAAAAAGCCTAACATTGACTGTTAGGCTTTTTATTATTCTA
AAAATCGCTCTGTCGATTAC

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MSELKKSLGTLDVIALAFGAMVGWGWVVLAGGWILSAGTWGAMLAFFIGGLAVILIGVTYAELAASMPITGGEHTYTHRA
LGVNVSFICSWSILFGYFSVVAFEAVALPTVVEYFIPNYNQGYLWTIAGWDVYATWVGVGMLGSVIVTWLNIRGMEVSAW
FQKTAVLGILFVGTLLFIGAVLYNPETSTAIQSPAFIGGVGGMMAVIVMVPFMFVGFDVIPQAAEEIDLTRPNIGKFLII
SIVVAVMWYVGIAWSVGTTLPLVQAESSTLATADAMTNAWQGKWAGILLVIGGVLGILSSWNAFLIGGSRLLYAMSKARM
LPAFLGKLHPKYNTPSNAILLIGGLATLAPLFGRKMLVWIVDAGGFGIVIAYTCVAISFLVLRYREPDMVRPFKIPAGKL
VGMITIALSFGLLMLYMPGMPSALTAVEWWIFFGWTVLGIVLYSYARIKYPGISESIMAEELRELKIVNQLWLKDNPPKQ

Sequences:

>Translated_480_residues
MSELKKSLGTLDVIALAFGAMVGWGWVVLAGGWILSAGTWGAMLAFFIGGLAVILIGVTYAELAASMPITGGEHTYTHRA
LGVNVSFICSWSILFGYFSVVAFEAVALPTVVEYFIPNYNQGYLWTIAGWDVYATWVGVGMLGSVIVTWLNIRGMEVSAW
FQKTAVLGILFVGTLLFIGAVLYNPETSTAIQSPAFIGGVGGMMAVIVMVPFMFVGFDVIPQAAEEIDLTRPNIGKFLII
SIVVAVMWYVGIAWSVGTTLPLVQAESSTLATADAMTNAWQGKWAGILLVIGGVLGILSSWNAFLIGGSRLLYAMSKARM
LPAFLGKLHPKYNTPSNAILLIGGLATLAPLFGRKMLVWIVDAGGFGIVIAYTCVAISFLVLRYREPDMVRPFKIPAGKL
VGMITIALSFGLLMLYMPGMPSALTAVEWWIFFGWTVLGIVLYSYARIKYPGISESIMAEELRELKIVNQLWLKDNPPKQ
>Mature_479_residues
SELKKSLGTLDVIALAFGAMVGWGWVVLAGGWILSAGTWGAMLAFFIGGLAVILIGVTYAELAASMPITGGEHTYTHRAL
GVNVSFICSWSILFGYFSVVAFEAVALPTVVEYFIPNYNQGYLWTIAGWDVYATWVGVGMLGSVIVTWLNIRGMEVSAWF
QKTAVLGILFVGTLLFIGAVLYNPETSTAIQSPAFIGGVGGMMAVIVMVPFMFVGFDVIPQAAEEIDLTRPNIGKFLIIS
IVVAVMWYVGIAWSVGTTLPLVQAESSTLATADAMTNAWQGKWAGILLVIGGVLGILSSWNAFLIGGSRLLYAMSKARML
PAFLGKLHPKYNTPSNAILLIGGLATLAPLFGRKMLVWIVDAGGFGIVIAYTCVAISFLVLRYREPDMVRPFKIPAGKLV
GMITIALSFGLLMLYMPGMPSALTAVEWWIFFGWTVLGIVLYSYARIKYPGISESIMAEELRELKIVNQLWLKDNPPKQ

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI110347453, Length=396, Percent_Identity=26.010101010101, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI258614005, Length=421, Percent_Identity=28.0285035629454, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI258614003, Length=421, Percent_Identity=28.0285035629454, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI258645169, Length=421, Percent_Identity=27.790973871734, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4507047, Length=433, Percent_Identity=24.7113163972286, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI181337167, Length=412, Percent_Identity=27.4271844660194, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI87082250, Length=421, Percent_Identity=27.5534441805226, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1788480, Length=398, Percent_Identity=25.8793969849246, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI87082023, Length=385, Percent_Identity=23.1168831168831, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87081708, Length=404, Percent_Identity=24.5049504950495, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789017, Length=398, Percent_Identity=23.6180904522613, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081869, Length=420, Percent_Identity=22.8571428571429, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17532491, Length=400, Percent_Identity=26, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17531343, Length=400, Percent_Identity=25, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17533459, Length=411, Percent_Identity=25.0608272506083, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221512776, Length=422, Percent_Identity=27.0142180094787, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24666159, Length=422, Percent_Identity=27.0142180094787, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24668806, Length=413, Percent_Identity=26.3922518159806, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI21356285, Length=413, Percent_Identity=26.3922518159806, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24668802, Length=413, Percent_Identity=26.3922518159806, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI281366235, Length=402, Percent_Identity=27.1144278606965, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI116007820, Length=402, Percent_Identity=27.1144278606965, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI116007818, Length=400, Percent_Identity=27.25, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI85725152, Length=400, Percent_Identity=27.25, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24667468, Length=436, Percent_Identity=21.5596330275229, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI161077963, Length=391, Percent_Identity=25.3196930946292, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004758
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51979; Mature: 51847

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure 
SELKKSLGTLDVIALAFGAMVGWGWVVLAGGWILSAGTWGAMLAFFIGGLAVILIGVTY
CHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHHHHHHHHHH
AELAASMPITGGEHTYTHRALGVNVSFICSWSILFGYFSVVAFEAVALPTVVEYFIPNYN
HHHHHCCCCCCCCCCEEEHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QGYLWTIAGWDVYATWVGVGMLGSVIVTWLNIRGMEVSAWFQKTAVLGILFVGTLLFIGA
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLYNPETSTAIQSPAFIGGVGGMMAVIVMVPFMFVGFDVIPQAAEEIDLTRPNIGKFLII
HHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SIVVAVMWYVGIAWSVGTTLPLVQAESSTLATADAMTNAWQGKWAGILLVIGGVLGILSS
HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
WNAFLIGGSRLLYAMSKARMLPAFLGKLHPKYNTPSNAILLIGGLATLAPLFGRKMLVWI
CCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCEEEEEE
VDAGGFGIVIAYTCVAISFLVLRYREPDMVRPFKIPAGKLVGMITIALSFGLLMLYMPGM
EECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PSALTAVEWWIFFGWTVLGIVLYSYARIKYPGISESIMAEELRELKIVNQLWLKDNPPKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]