| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005641
Identifier: 93005641
GI number: 93005641
Start: 955923
End: 957293
Strand: Reverse
Name: 93005641
Synonym: Pcryo_0811
Alternate gene names: NA
Gene position: 957293-955923 (Counterclockwise)
Preceding gene: 93005642
Following gene: 93005636
Centisome position: 31.29
GC content: 50.26
Gene sequence:
>1371_bases ATGGATAATATCAATCGTACAGTAGTAGTCAATGACAACGCTGACCCCATTACAGGTGAGCCAGGCTCACATCCAATAGG TACAGCTCTTGGTGGTACAGGCGGTGCAGCAGCAGGCGCAGCTATTGGTGCTATTGGTGGTCCATTAGGCATGCTGATTG GTGGTGCTATTGGTGCTATCGTTGGTGGTGTCGCAGGTAGTTCAGTCGGTGAAATGCTAGACCCAACAGTAGAATATGAA TACTGGCAAGAAACTCATACCACGCGCCCTTATTATCATGAAGATTATGATTATGATACCGATTATCATCCAGCCTATGC AGTAGGTTATGCCACCCGTGCGCATTATCCAAATACTACACGCTTTGAAGAAGTTGAAGCTGAGCTTGAACAGCGCTGGT ATGAGGTAAAAGGCGACTCACGCATGACCTGGCTACAAGCAAAAGACATGGTACGTGATGGTTGGGATAAGACCCATGCC CGTATGAATGGTGAAAACTATGAGCCAAAAGAGTACGTCCATTATGCAGGTCATAGAGAGCCTATTGAGCCGATCCATCA TGGTGAAGATAAGCCGCACCCAGTAGCGACTGGTACTGGCGCGCTTAGTGGCGCAGCAGCAGGTGCAGCCGTAGGCACAG CAGTCGGAGGTCCAGTTGGCACCTTAGTAGGTGGCGCTGTTGGAGCAATCGCAGGTAGCAAAGTTGGACATGAAGCAGGC GAGATGGTCAATCCTACCGATAGCTTAGAAGCTCATGAGAAGCCACATCCTATTGCTAGTGGTACTGGTGCACTGGGCGG TGCAGCAGCAGGCGCTGCTGTAGGTACGGCAGTTGGTGGTCCAGTCGGTACAGTAATCGGCGGCTTAGCAGGCGCAGTTG CTGGTGGTGCTGGTGGCCAAGAAGTTGGTGAAGCCGTTAATCCTACTGATCAAAATGAAGTACAACGAGAAGCAAATCCT GTTAGTAGTGGTACAGGTATGGTCGGCGGTGCAGCAGCAGGCGCAGCTATCGGTGCAGTAGGTGGTCCAGTAGGTTCAGT CGTAGGCGGTGCCGTTGGTGCAGTCGTCGGTGCAACAGCTGGTAACGCCGTTGCCAATGCGTTTGAAGGCAATATGGAAG AAGACACTTACTGGCGTACTCAGCATGCGACGACTGACTACTATAATCCGCAATATGATTACGATACCGACTATCGTAAT GCCTATGGTTATGGTTATGCGCAGCGCAAGCAGTATGGTAACGACCAAACGTTTGAGCTGGTAGAGCAAGACTTGCAGAG AGATTGGTTAAATTCACGTGGCAACTCACGCTTAGAATGGTCAGATGCTAGATTTGCCGTACGTGATGCGTGGAATCGTC CTATTATTTAA
Upstream 100 bases:
>100_bases TGGATGTCAAAAATGACCTTTATTTTAATGTCATTTAGATTGCAGGCTACTTATATCATTCTTCATAACTTAACAATAAT AGTAAAAAGGATAATAGCTC
Downstream 100 bases:
>100_bases TTATTAATGATGAGGCAATGATTGCTTATCGTAGACAATTAAAATGTTATGAAAAAACAGCTTCTATTAAATAATAGAAG CTGTTTTTTTAGTCTGATTT
Product: 17 kDa surface antigen
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MDNINRTVVVNDNADPITGEPGSHPIGTALGGTGGAAAGAAIGAIGGPLGMLIGGAIGAIVGGVAGSSVGEMLDPTVEYE YWQETHTTRPYYHEDYDYDTDYHPAYAVGYATRAHYPNTTRFEEVEAELEQRWYEVKGDSRMTWLQAKDMVRDGWDKTHA RMNGENYEPKEYVHYAGHREPIEPIHHGEDKPHPVATGTGALSGAAAGAAVGTAVGGPVGTLVGGAVGAIAGSKVGHEAG EMVNPTDSLEAHEKPHPIASGTGALGGAAAGAAVGTAVGGPVGTVIGGLAGAVAGGAGGQEVGEAVNPTDQNEVQREANP VSSGTGMVGGAAAGAAIGAVGGPVGSVVGGAVGAVVGATAGNAVANAFEGNMEEDTYWRTQHATTDYYNPQYDYDTDYRN AYGYGYAQRKQYGNDQTFELVEQDLQRDWLNSRGNSRLEWSDARFAVRDAWNRPII
Sequences:
>Translated_456_residues MDNINRTVVVNDNADPITGEPGSHPIGTALGGTGGAAAGAAIGAIGGPLGMLIGGAIGAIVGGVAGSSVGEMLDPTVEYE YWQETHTTRPYYHEDYDYDTDYHPAYAVGYATRAHYPNTTRFEEVEAELEQRWYEVKGDSRMTWLQAKDMVRDGWDKTHA RMNGENYEPKEYVHYAGHREPIEPIHHGEDKPHPVATGTGALSGAAAGAAVGTAVGGPVGTLVGGAVGAIAGSKVGHEAG EMVNPTDSLEAHEKPHPIASGTGALGGAAAGAAVGTAVGGPVGTVIGGLAGAVAGGAGGQEVGEAVNPTDQNEVQREANP VSSGTGMVGGAAAGAAIGAVGGPVGSVVGGAVGAVVGATAGNAVANAFEGNMEEDTYWRTQHATTDYYNPQYDYDTDYRN AYGYGYAQRKQYGNDQTFELVEQDLQRDWLNSRGNSRLEWSDARFAVRDAWNRPII >Mature_456_residues MDNINRTVVVNDNADPITGEPGSHPIGTALGGTGGAAAGAAIGAIGGPLGMLIGGAIGAIVGGVAGSSVGEMLDPTVEYE YWQETHTTRPYYHEDYDYDTDYHPAYAVGYATRAHYPNTTRFEEVEAELEQRWYEVKGDSRMTWLQAKDMVRDGWDKTHA RMNGENYEPKEYVHYAGHREPIEPIHHGEDKPHPVATGTGALSGAAAGAAVGTAVGGPVGTLVGGAVGAIAGSKVGHEAG EMVNPTDSLEAHEKPHPIASGTGALGGAAAGAAVGTAVGGPVGTVIGGLAGAVAGGAGGQEVGEAVNPTDQNEVQREANP VSSGTGMVGGAAAGAAIGAVGGPVGSVVGGAVGAVVGATAGNAVANAFEGNMEEDTYWRTQHATTDYYNPQYDYDTDYRN AYGYGYAQRKQYGNDQTFELVEQDLQRDWLNSRGNSRLEWSDARFAVRDAWNRPII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47160; Mature: 47160
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNINRTVVVNDNADPITGEPGSHPIGTALGGTGGAAAGAAIGAIGGPLGMLIGGAIGAI CCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGGVAGSSVGEMLDPTVEYEYWQETHTTRPYYHEDYDYDTDYHPAYAVGYATRAHYPNTT HHHHCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCC RFEEVEAELEQRWYEVKGDSRMTWLQAKDMVRDGWDKTHARMNGENYEPKEYVHYAGHRE HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHCCCCC PIEPIHHGEDKPHPVATGTGALSGAAAGAAVGTAVGGPVGTLVGGAVGAIAGSKVGHEAG CCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCHHHC EMVNPTDSLEAHEKPHPIASGTGALGGAAAGAAVGTAVGGPVGTVIGGLAGAVAGGAGGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH EVGEAVNPTDQNEVQREANPVSSGTGMVGGAAAGAAIGAVGGPVGSVVGGAVGAVVGATA HHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC GNAVANAFEGNMEEDTYWRTQHATTDYYNPQYDYDTDYRNAYGYGYAQRKQYGNDQTFEL CHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHH VEQDLQRDWLNSRGNSRLEWSDARFAVRDAWNRPII HHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCCCCC >Mature Secondary Structure MDNINRTVVVNDNADPITGEPGSHPIGTALGGTGGAAAGAAIGAIGGPLGMLIGGAIGAI CCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGGVAGSSVGEMLDPTVEYEYWQETHTTRPYYHEDYDYDTDYHPAYAVGYATRAHYPNTT HHHHCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCC RFEEVEAELEQRWYEVKGDSRMTWLQAKDMVRDGWDKTHARMNGENYEPKEYVHYAGHRE HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHCCCCC PIEPIHHGEDKPHPVATGTGALSGAAAGAAVGTAVGGPVGTLVGGAVGAIAGSKVGHEAG CCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCHHHC EMVNPTDSLEAHEKPHPIASGTGALGGAAAGAAVGTAVGGPVGTVIGGLAGAVAGGAGGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH EVGEAVNPTDQNEVQREANPVSSGTGMVGGAAAGAAIGAVGGPVGSVVGGAVGAVVGATA HHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC GNAVANAFEGNMEEDTYWRTQHATTDYYNPQYDYDTDYRNAYGYGYAQRKQYGNDQTFEL CHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHH VEQDLQRDWLNSRGNSRLEWSDARFAVRDAWNRPII HHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA