| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is bcp [H]
Identifier: 93005605
GI number: 93005605
Start: 914208
End: 914708
Strand: Reverse
Name: bcp [H]
Synonym: Pcryo_0775
Alternate gene names: 93005605
Gene position: 914708-914208 (Counterclockwise)
Preceding gene: 93005606
Following gene: 93005604
Centisome position: 29.89
GC content: 38.72
Gene sequence:
>501_bases ATGATGGCAAAGCCAACCACAGAAACCATTACTCTACCTGATTTTCCAGTCACTATCGTACGTGAGCTAGATGGTCATTT TATTCATGATGATATTAGCCTAAAAGAGCTGGTCGCCAACACCAGCAAGGGACTTATCCTTTATTTTTACCCAAAAGACA ATACACCTGGCTGTACCACACAAGCAACTGAGTTTACCGCCCATCTTAACGAATTTGATGATTTAGGTTATGACATTATT GGCGTCTCACGTGATAGCGTTGAATCACACGAAAGCTTTATTAGCAAATATAATCTACATATTCCACTTATTAGTGATGC CGATGAAAAACTCTGCCACTATTTTGATGTGATTAAAGAAAAGAACATGTATGGCAATATTACTCTAGGTCTTGTACGTT CGGCGTTTGTCTTTGATAAAAATGGTACGCTCACTCATGCACAGCGTAACCTTAAAGCAAAGGATTATACTGAGCGTTTA TTAACTACACTTGCACCTTAG
Upstream 100 bases:
>100_bases CCATAAGTGATGTGTAAAATCGAGGATTTATTTCTATGAATCTGCCTATAATGGGATGACCAATAATAATATAACCGCAA TCAAAATAAATAAGGATTTT
Downstream 100 bases:
>100_bases TCTTCTAATCTAGCTTACGATAAACCTTAAAACTATTTTTATTTGAGAATACTATGAATAAACAGCCTGATACCGCCTCT GATTCTTCTGCTCCCTTTGA
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MMAKPTTETITLPDFPVTIVRELDGHFIHDDISLKELVANTSKGLILYFYPKDNTPGCTTQATEFTAHLNEFDDLGYDII GVSRDSVESHESFISKYNLHIPLISDADEKLCHYFDVIKEKNMYGNITLGLVRSAFVFDKNGTLTHAQRNLKAKDYTERL LTTLAP
Sequences:
>Translated_166_residues MMAKPTTETITLPDFPVTIVRELDGHFIHDDISLKELVANTSKGLILYFYPKDNTPGCTTQATEFTAHLNEFDDLGYDII GVSRDSVESHESFISKYNLHIPLISDADEKLCHYFDVIKEKNMYGNITLGLVRSAFVFDKNGTLTHAQRNLKAKDYTERL LTTLAP >Mature_166_residues MMAKPTTETITLPDFPVTIVRELDGHFIHDDISLKELVANTSKGLILYFYPKDNTPGCTTQATEFTAHLNEFDDLGYDII GVSRDSVESHESFISKYNLHIPLISDADEKLCHYFDVIKEKNMYGNITLGLVRSAFVFDKNGTLTHAQRNLKAKDYTERL LTTLAP
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=120, Percent_Identity=34.1666666666667, Blast_Score=84, Evalue=6e-18,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 18773; Mature: 18773
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAKPTTETITLPDFPVTIVRELDGHFIHDDISLKELVANTSKGLILYFYPKDNTPGCTT CCCCCCCCEEECCCCCHHHHHHCCCCEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCCC QATEFTAHLNEFDDLGYDIIGVSRDSVESHESFISKYNLHIPLISDADEKLCHYFDVIKE CHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHC KNMYGNITLGLVRSAFVFDKNGTLTHAQRNLKAKDYTERLLTTLAP CCCCCCCHHHHHHEEEEECCCCCEEHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MMAKPTTETITLPDFPVTIVRELDGHFIHDDISLKELVANTSKGLILYFYPKDNTPGCTT CCCCCCCCEEECCCCCHHHHHHCCCCEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCCC QATEFTAHLNEFDDLGYDIIGVSRDSVESHESFISKYNLHIPLISDADEKLCHYFDVIKE CHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHC KNMYGNITLGLVRSAFVFDKNGTLTHAQRNLKAKDYTERLLTTLAP CCCCCCCHHHHHHEEEEECCCCCEEHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]