| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005582
Identifier: 93005582
GI number: 93005582
Start: 884539
End: 885522
Strand: Reverse
Name: 93005582
Synonym: Pcryo_0752
Alternate gene names: NA
Gene position: 885522-884539 (Counterclockwise)
Preceding gene: 93005583
Following gene: 93005580
Centisome position: 28.94
GC content: 46.04
Gene sequence:
>984_bases ATGCATCATCCGTATCAGTTGGGAGCGAGCTTATATATGCCAGCGACGCGCCAAGATATCTGGCAAGTGATCAAGCGTGA TAAATTACCGACGATTAATAGTATTATCATCTGTCTAGAAGATGCGGTCAGCCACAATGATGTTGAGTTGGCACTTGAGC GCTTGCAGACGCTGCTGTATACGTGGGCAACGCACGTCGATAGTATCAATGAGCCGATACAGCAAGCTGAAACACAACAA ACCAAGATACAGACTGAGCAGCCAACGCGTCCGTTGGTATTTGTACGTCCGCGCCATCCTGCCATGTTAGAGCAGTTATC GGGCTTTACCCATATTGATTTGATTGACGGTTTTGTGATGCCAAAAGTCGATATGTACAGTCTATCTAATTGGCGCATGG CATGCCAGAATCTTAGTACTGACATGCTATTAATGCCAACGCTTGAGACGGCAGCGTTGTTTAATCCTCATCATAATCAA GAGCTGGCGATTGGTTTCAAAGAAGCTTTTAGCCAGCCGGTATTTGCTTTGCGTATTGGTGGTAATGATTTATTTGCAGC ACTGCGTTTGCGCCGTCCTAAGAATAGCCTTGTCTATGATACACCTGTTGGTACACTAGCCTACCAGCTGCTTGGCTGTT TTGTGCCCCATGGCTTTTATCTGTCGGCGCCGGTGTTTGAGTATTTGGATGAGCCTACGTTATTTATGCAAGAGTTGACG CGTGATGTCAGCTTGGGCTTGGTCGGAAAAACCGTTATTCATCCAAGTCAGATTGCCTTGGTACAGCAAGCATACTGCGT ACCGCTTAGCACTTTAGATGAGGCACAGGCGATATTACATAGCGAGGCAAAAGCGGTCTTTAAATATAACAATACTATGC TAGAGCCTGCTACCCATCGTGCTTGGGCAACCGAAATCGTCAATAGAGCTAACGTTTTTGGCACCATTAATGATGGCAAT AACGACTATACAGCGCGCTTATAG
Upstream 100 bases:
>100_bases CATTATGTCAGATATGCCAAAAAACGAGTCCCACCTTTATCAAAACACCCAGTCTTACGCGCATCTGATTACTGAGCGTC ATGCTATGCTCAAACCTAAC
Downstream 100 bases:
>100_bases ATTGTAAACACTCTTTTTAAAGCGTTAAAAAAGCCGTTATCAAATCCATGATAACGGCTTTTTTTCTACATTTTTTGCGA TAATAAACGCTGTTATATCA
Product: hypothetical protein
Products: NA
Alternate protein names: Citrate Lyase Beta Subunit; Citrate Lyase Subunit Beta; Citrate Lyase Beta Subunit-Like
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MHHPYQLGASLYMPATRQDIWQVIKRDKLPTINSIIICLEDAVSHNDVELALERLQTLLYTWATHVDSINEPIQQAETQQ TKIQTEQPTRPLVFVRPRHPAMLEQLSGFTHIDLIDGFVMPKVDMYSLSNWRMACQNLSTDMLLMPTLETAALFNPHHNQ ELAIGFKEAFSQPVFALRIGGNDLFAALRLRRPKNSLVYDTPVGTLAYQLLGCFVPHGFYLSAPVFEYLDEPTLFMQELT RDVSLGLVGKTVIHPSQIALVQQAYCVPLSTLDEAQAILHSEAKAVFKYNNTMLEPATHRAWATEIVNRANVFGTINDGN NDYTARL
Sequences:
>Translated_327_residues MHHPYQLGASLYMPATRQDIWQVIKRDKLPTINSIIICLEDAVSHNDVELALERLQTLLYTWATHVDSINEPIQQAETQQ TKIQTEQPTRPLVFVRPRHPAMLEQLSGFTHIDLIDGFVMPKVDMYSLSNWRMACQNLSTDMLLMPTLETAALFNPHHNQ ELAIGFKEAFSQPVFALRIGGNDLFAALRLRRPKNSLVYDTPVGTLAYQLLGCFVPHGFYLSAPVFEYLDEPTLFMQELT RDVSLGLVGKTVIHPSQIALVQQAYCVPLSTLDEAQAILHSEAKAVFKYNNTMLEPATHRAWATEIVNRANVFGTINDGN NDYTARL >Mature_327_residues MHHPYQLGASLYMPATRQDIWQVIKRDKLPTINSIIICLEDAVSHNDVELALERLQTLLYTWATHVDSINEPIQQAETQQ TKIQTEQPTRPLVFVRPRHPAMLEQLSGFTHIDLIDGFVMPKVDMYSLSNWRMACQNLSTDMLLMPTLETAALFNPHHNQ ELAIGFKEAFSQPVFALRIGGNDLFAALRLRRPKNSLVYDTPVGTLAYQLLGCFVPHGFYLSAPVFEYLDEPTLFMQELT RDVSLGLVGKTVIHPSQIALVQQAYCVPLSTLDEAQAILHSEAKAVFKYNNTMLEPATHRAWATEIVNRANVFGTINDGN NDYTARL
Specific function: Unknown
COG id: COG2301
COG function: function code G; Citrate lyase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36962; Mature: 36962
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHPYQLGASLYMPATRQDIWQVIKRDKLPTINSIIICLEDAVSHNDVELALERLQTLLY CCCCHHCCCEEECCCHHHHHHHHHHHCCCCCHHHEEEEEEHHCCCCHHHHHHHHHHHHHH TWATHVDSINEPIQQAETQQTKIQTEQPTRPLVFVRPRHPAMLEQLSGFTHIDLIDGFVM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHCCCEEEHHHCCCCC PKVDMYSLSNWRMACQNLSTDMLLMPTLETAALFNPHHNQELAIGFKEAFSQPVFALRIG CCCCEEECCHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCEEEEEHHHHHCCCEEEEEEC GNDLFAALRLRRPKNSLVYDTPVGTLAYQLLGCFVPHGFYLSAPVFEYLDEPTLFMQELT CCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCEEECCHHHHHCCCHHHHHHHHH RDVSLGLVGKTVIHPSQIALVQQAYCVPLSTLDEAQAILHSEAKAVFKYNNTMLEPATHR HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCEEECCCHHH AWATEIVNRANVFGTINDGNNDYTARL HHHHHHHHHHHEEEEEECCCCCEEECC >Mature Secondary Structure MHHPYQLGASLYMPATRQDIWQVIKRDKLPTINSIIICLEDAVSHNDVELALERLQTLLY CCCCHHCCCEEECCCHHHHHHHHHHHCCCCCHHHEEEEEEHHCCCCHHHHHHHHHHHHHH TWATHVDSINEPIQQAETQQTKIQTEQPTRPLVFVRPRHPAMLEQLSGFTHIDLIDGFVM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHCCCEEEHHHCCCCC PKVDMYSLSNWRMACQNLSTDMLLMPTLETAALFNPHHNQELAIGFKEAFSQPVFALRIG CCCCEEECCHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCEEEEEHHHHHCCCEEEEEEC GNDLFAALRLRRPKNSLVYDTPVGTLAYQLLGCFVPHGFYLSAPVFEYLDEPTLFMQELT CCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCEEECCHHHHHCCCHHHHHHHHH RDVSLGLVGKTVIHPSQIALVQQAYCVPLSTLDEAQAILHSEAKAVFKYNNTMLEPATHR HHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCEEECCCHHH AWATEIVNRANVFGTINDGNNDYTARL HHHHHHHHHHHEEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA