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The map label for this gene is dps [H]

Identifier: 93005565

GI number: 93005565

Start: 864532

End: 865029

Strand: Reverse

Name: dps [H]

Synonym: Pcryo_0735

Alternate gene names: 93005565

Gene position: 865029-864532 (Counterclockwise)

Preceding gene: 93005566

Following gene: 93005556

Centisome position: 28.27

GC content: 42.77

Gene sequence:

>498_bases
ATGAGAGAACGTTACGCAAGTGGAATAGATGACGCAACTGCAAAAAAAATGATCGATCTGTTGAACGCGAATTTAGCAAA
CCTGATTGATTTGAGTATGGATAGCAAGCAATGTCATTGGAATCTTCAAGGTACTGGTTTCATTGGTGTACATCAGTTAT
TGGATGACACTTATGGACGCTTAACAGAAGCTTATGATACAGTCGCTGAGCGCATTGTTATCCTTGGTGGTAAAGCCAAT
GGTATCTCTAAACGTGTCGTTGAGGACTCTATCTTAGAGACTTACCCGACTGATATTACTGACGTTGACCAGCATGTTCG
TGAGCTGACCAATCGCTATAAGACAATTGCTGCGTCTTTGCGTGAAGGGATTGATGCCGCTGGCGATGCGGGTGATGAAG
ATACCGCTGACTTATTGACTGAAGTGAGTCGTACTGTTGATAAAGATGCTTGGTTTATCGGTGCAAACGCCCCGGAAAAA
GATACGTCTAAAAAATAA

Upstream 100 bases:

>100_bases
GAATTTATAAGCAGTCAGCAACACCTTAATAAATAGAAATTTAAAGAGCTGTTGATAATTAGAAACCTAAATTTATTAAA
ATAGAATAATGGAGCAGAAT

Downstream 100 bases:

>100_bases
GCACGTTTCAACATAAGATTAACTTATTTGCTAAATAGAAAAAGGTCACCTCAATGGTGACCTTTTTTATGTTTGACGAT
TTTGACTAGAATCATTGAAC

Product: Ferritin and Dps

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MRERYASGIDDATAKKMIDLLNANLANLIDLSMDSKQCHWNLQGTGFIGVHQLLDDTYGRLTEAYDTVAERIVILGGKAN
GISKRVVEDSILETYPTDITDVDQHVRELTNRYKTIAASLREGIDAAGDAGDEDTADLLTEVSRTVDKDAWFIGANAPEK
DTSKK

Sequences:

>Translated_165_residues
MRERYASGIDDATAKKMIDLLNANLANLIDLSMDSKQCHWNLQGTGFIGVHQLLDDTYGRLTEAYDTVAERIVILGGKAN
GISKRVVEDSILETYPTDITDVDQHVRELTNRYKTIAASLREGIDAAGDAGDEDTADLLTEVSRTVDKDAWFIGANAPEK
DTSKK
>Mature_165_residues
MRERYASGIDDATAKKMIDLLNANLANLIDLSMDSKQCHWNLQGTGFIGVHQLLDDTYGRLTEAYDTVAERIVILGGKAN
GISKRVVEDSILETYPTDITDVDQHVRELTNRYKTIAASLREGIDAAGDAGDEDTADLLTEVSRTVDKDAWFIGANAPEK
DTSKK

Specific function: During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co- crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering in

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

Organism=Escherichia coli, GI1787032, Length=148, Percent_Identity=43.2432432432432, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR023067
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 18147; Mature: 18147

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERYASGIDDATAKKMIDLLNANLANLIDLSMDSKQCHWNLQGTGFIGVHQLLDDTYGR
CCCCHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHH
LTEAYDTVAERIVILGGKANGISKRVVEDSILETYPTDITDVDQHVRELTNRYKTIAASL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
REGIDAAGDAGDEDTADLLTEVSRTVDKDAWFIGANAPEKDTSKK
HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MRERYASGIDDATAKKMIDLLNANLANLIDLSMDSKQCHWNLQGTGFIGVHQLLDDTYGR
CCCCHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHH
LTEAYDTVAERIVILGGKANGISKRVVEDSILETYPTDITDVDQHVRELTNRYKTIAASL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
REGIDAAGDAGDEDTADLLTEVSRTVDKDAWFIGANAPEKDTSKK
HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA