| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005556
Identifier: 93005556
GI number: 93005556
Start: 854507
End: 855439
Strand: Reverse
Name: 93005556
Synonym: Pcryo_0726
Alternate gene names: NA
Gene position: 855439-854507 (Counterclockwise)
Preceding gene: 93005565
Following gene: 93005555
Centisome position: 27.96
GC content: 42.34
Gene sequence:
>933_bases ATGAGTAATAATGAACAAATAACTTCCTCTGACAATACCCATTATCTGCATCATACTTTTTTTGAGCCGAGCCATAGTGA TACTGTCATTAGTGCAACCTTGCTGATTGTACACGGCATGGCAGAGCACAGCGGGCGTTATGCAGACGTGGCGCAATTTT TAGCCGATCACGGTATTGCGGTCGCCACTTATGACCAGCTTGGTCATGGAAAAACTGTTAAATCAGCCAAAGACTTGGGG TTTTTTGGTGAAGAGCATCCTGTGCAGTCATTATTAAAAGATGTCATCGTCATGGCGGACAGCTTAAAAGCGCGTCATCC GAATGTACCACATTTCGTCATGGGTCACTCTATGGGCTCGTTTATCGTCCGTAACGTCCTTAAACACCATGCGCGTAATT TTACCGGTGCTATTTTAATGGGTACAGCAGATGCCAATCCATTGATCAAAGTATTATTGCCTATCAATAAGTTATTGACA AAAGCGGCGCCTAAAAAGCCAAATACCTTATTTGCTAACGTGATGAACAAAGTACTCAATAGCAAGCTTAATAATCGTAT TTCTTCATCAAAGTTTGCTTGGTTAAGCGAAAATCCTGCCGCTGTTGAAGCTTATGAAGCCGATCCATTGACGGGTTTTG ATTTTACCAATAACGGCTTTATGACCCTCTTTACACTGATGAATGCAGGCTTGCATAAAAACTGGGCAATGACGATTGCC AAAGATTTTCCAATGTTATTAATCAGCGGAGAAAATGACCCAATCGGTGATATGGGTCGCGGTATTCGTAATATTGCCAA TCGCCTAGACAGACAACATTTTGATCATGTCTCTGTGCAGCTCTACCCTCACATGCGCCATGAGCCGCTCCATGAACAGA ATAAAGAGCAGGTTTACCAAGACATCTTAGGCTGGATAAATAGCAATACTTAA
Upstream 100 bases:
>100_bases AATTAGATTGGTTGTAGCAATAACTTATCCCTATAATAAAGCCCTAAAAAATATATAATCTATCTCATCATACCCTTAAC CATTCAAGGACTGGATTTTT
Downstream 100 bases:
>100_bases GCCCATAAAATCCCGAAATTATAGTATCGTCTATCACGTTTGCTAAAAGTCGCCAAATTAGCGACAATACGGCAAGTTTT TATTTACCTTCATCAATTCT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase; Hydrolase; Lipase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Acylglycerol Lipase; Hydrolase Alpha/Beta Hydrolase Fold Family; Monoglyceride Lipase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase Protein; Lysophospholipase-Like Protein; Carboxylic Ester Hydrolase; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Monoacylglycerol Lipase; Alpha/Beta Hydrolase Family Protein; S33 Family Lysophospholipase; Alpha/Beta Fold Family Protein Hydrolase; Aminopeptidase; Hydrolase Alpha/Beta Domain-Containing Protein; Lysophospholipase/Monoglyceride Lipase
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSNNEQITSSDNTHYLHHTFFEPSHSDTVISATLLIVHGMAEHSGRYADVAQFLADHGIAVATYDQLGHGKTVKSAKDLG FFGEEHPVQSLLKDVIVMADSLKARHPNVPHFVMGHSMGSFIVRNVLKHHARNFTGAILMGTADANPLIKVLLPINKLLT KAAPKKPNTLFANVMNKVLNSKLNNRISSSKFAWLSENPAAVEAYEADPLTGFDFTNNGFMTLFTLMNAGLHKNWAMTIA KDFPMLLISGENDPIGDMGRGIRNIANRLDRQHFDHVSVQLYPHMRHEPLHEQNKEQVYQDILGWINSNT
Sequences:
>Translated_310_residues MSNNEQITSSDNTHYLHHTFFEPSHSDTVISATLLIVHGMAEHSGRYADVAQFLADHGIAVATYDQLGHGKTVKSAKDLG FFGEEHPVQSLLKDVIVMADSLKARHPNVPHFVMGHSMGSFIVRNVLKHHARNFTGAILMGTADANPLIKVLLPINKLLT KAAPKKPNTLFANVMNKVLNSKLNNRISSSKFAWLSENPAAVEAYEADPLTGFDFTNNGFMTLFTLMNAGLHKNWAMTIA KDFPMLLISGENDPIGDMGRGIRNIANRLDRQHFDHVSVQLYPHMRHEPLHEQNKEQVYQDILGWINSNT >Mature_309_residues SNNEQITSSDNTHYLHHTFFEPSHSDTVISATLLIVHGMAEHSGRYADVAQFLADHGIAVATYDQLGHGKTVKSAKDLGF FGEEHPVQSLLKDVIVMADSLKARHPNVPHFVMGHSMGSFIVRNVLKHHARNFTGAILMGTADANPLIKVLLPINKLLTK AAPKKPNTLFANVMNKVLNSKLNNRISSSKFAWLSENPAAVEAYEADPLTGFDFTNNGFMTLFTLMNAGLHKNWAMTIAK DFPMLLISGENDPIGDMGRGIRNIANRLDRQHFDHVSVQLYPHMRHEPLHEQNKEQVYQDILGWINSNT
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI51242953, Length=310, Percent_Identity=26.4516129032258, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI6005786, Length=310, Percent_Identity=26.4516129032258, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34566; Mature: 34435
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNEQITSSDNTHYLHHTFFEPSHSDTVISATLLIVHGMAEHSGRYADVAQFLADHGIA CCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCE VATYDQLGHGKTVKSAKDLGFFGEEHPVQSLLKDVIVMADSLKARHPNVPHFVMGHSMGS EEEHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHCCHHH FIVRNVLKHHARNFTGAILMGTADANPLIKVLLPINKLLTKAAPKKPNTLFANVMNKVLN HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH SKLNNRISSSKFAWLSENPAAVEAYEADPLTGFDFTNNGFMTLFTLMNAGLHKNWAMTIA HHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHEEEE KDFPMLLISGENDPIGDMGRGIRNIANRLDRQHFDHVSVQLYPHMRHEPLHEQNKEQVYQ CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHCHHHHHHH DILGWINSNT HHHHHHCCCC >Mature Secondary Structure SNNEQITSSDNTHYLHHTFFEPSHSDTVISATLLIVHGMAEHSGRYADVAQFLADHGIA CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCE VATYDQLGHGKTVKSAKDLGFFGEEHPVQSLLKDVIVMADSLKARHPNVPHFVMGHSMGS EEEHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHCCHHH FIVRNVLKHHARNFTGAILMGTADANPLIKVLLPINKLLTKAAPKKPNTLFANVMNKVLN HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH SKLNNRISSSKFAWLSENPAAVEAYEADPLTGFDFTNNGFMTLFTLMNAGLHKNWAMTIA HHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHEEEE KDFPMLLISGENDPIGDMGRGIRNIANRLDRQHFDHVSVQLYPHMRHEPLHEQNKEQVYQ CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHCHHHHHHH DILGWINSNT HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA