| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93005417
Identifier: 93005417
GI number: 93005417
Start: 701244
End: 702053
Strand: Reverse
Name: 93005417
Synonym: Pcryo_0587
Alternate gene names: NA
Gene position: 702053-701244 (Counterclockwise)
Preceding gene: 93005420
Following gene: 93005402
Centisome position: 22.94
GC content: 39.88
Gene sequence:
>810_bases ATGATAAGGATAATAAGTTTGAGTAGCTTTAATAACATGAGTGATAACATCAATCATTCAGACAACTTTGATGACTTTTT CGAGAATCTCGGCTACCGCTTTGATGAATCATTCAGCGATGGTTGGGATCGCCTGACCCAATCTATTAAAGACTTATACA ACCGTACAACCGATAAGCTAGAAGATGAGCTGGCGCTACCGCTAACACAAGCCTACGTCAATGATGCGCTAAAAACCTAT GTCACGGATAATGTCAAAGCCATCTTAGAGCTGCGTGTTGAGATACACGAAGATTGGTTTCGCTTATACTGCACGGTCGA TGCAGGTGGCATTTATGCAGAGGTCGCGAGTAACTTTCGTCTGGTACATGCTCAGCTCGATCGCAATGTACAGCGCTTTG TCTTTGGGCAACTGACCTATACCGATATCCTAAATTTGCGCTGTGAGTCCTTTCTTAAGCGTCAAGGTATCAAACTATTT ATTTGGTTTTACCACCGTATCCTGAAAAAAGACCCGTTGGGTTTTATCCTATCTTATATCGATATTGCACGCGCCAAAAA TGAGATTATTTATATTGATATTAATCGTTGGCTGAAGAGTAATAAGAAAATTATCGGCATGTTACATAAGGCACAAGTTA ACTATGGTGAGCTTGAAGAAGAACAATTGATTTTGAAAGCGCAGATTAATTATCGCGATTTATTATCCTCAAATAGCAAT GAAGATATTATCAGCGAAAAAGACGAGCCAGTACAAGTACAAGGTCCTGTCCATCCATTAGATACAGAAAATGTAGCGAG CCAAGTTTAG
Upstream 100 bases:
>100_bases ATTTGATATAGAAAATAAAGGTATGCTGATGAGTAATAGACGTTCATTTTGCCCACCTCGTTTTTGATATATACTGTTTG GTATCGGTCACGCTTTTATA
Downstream 100 bases:
>100_bases AACATCATAAGCTCTCAGCTCTTATCACTTTGCTATCTTATAACTGTCAATTATTATAAAAAAATGCTGTATCTTGCCAG ACAAGAGTCGTCAAGATACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MIRIISLSSFNNMSDNINHSDNFDDFFENLGYRFDESFSDGWDRLTQSIKDLYNRTTDKLEDELALPLTQAYVNDALKTY VTDNVKAILELRVEIHEDWFRLYCTVDAGGIYAEVASNFRLVHAQLDRNVQRFVFGQLTYTDILNLRCESFLKRQGIKLF IWFYHRILKKDPLGFILSYIDIARAKNEIIYIDINRWLKSNKKIIGMLHKAQVNYGELEEEQLILKAQINYRDLLSSNSN EDIISEKDEPVQVQGPVHPLDTENVASQV
Sequences:
>Translated_269_residues MIRIISLSSFNNMSDNINHSDNFDDFFENLGYRFDESFSDGWDRLTQSIKDLYNRTTDKLEDELALPLTQAYVNDALKTY VTDNVKAILELRVEIHEDWFRLYCTVDAGGIYAEVASNFRLVHAQLDRNVQRFVFGQLTYTDILNLRCESFLKRQGIKLF IWFYHRILKKDPLGFILSYIDIARAKNEIIYIDINRWLKSNKKIIGMLHKAQVNYGELEEEQLILKAQINYRDLLSSNSN EDIISEKDEPVQVQGPVHPLDTENVASQV >Mature_269_residues MIRIISLSSFNNMSDNINHSDNFDDFFENLGYRFDESFSDGWDRLTQSIKDLYNRTTDKLEDELALPLTQAYVNDALKTY VTDNVKAILELRVEIHEDWFRLYCTVDAGGIYAEVASNFRLVHAQLDRNVQRFVFGQLTYTDILNLRCESFLKRQGIKLF IWFYHRILKKDPLGFILSYIDIARAKNEIIYIDINRWLKSNKKIIGMLHKAQVNYGELEEEQLILKAQINYRDLLSSNSN EDIISEKDEPVQVQGPVHPLDTENVASQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31443; Mature: 31443
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIISLSSFNNMSDNINHSDNFDDFFENLGYRFDESFSDGWDRLTQSIKDLYNRTTDKL CEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EDELALPLTQAYVNDALKTYVTDNVKAILELRVEIHEDWFRLYCTVDAGGIYAEVASNFR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCHHHHHHCCCE LVHAQLDRNVQRFVFGQLTYTDILNLRCESFLKRQGIKLFIWFYHRILKKDPLGFILSYI EEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCHHHHHHHH DIARAKNEIIYIDINRWLKSNKKIIGMLHKAQVNYGELEEEQLILKAQINYRDLLSSNSN HHHHCCCCEEEEEEHHHHCCCCHHHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHCCCCC EDIISEKDEPVQVQGPVHPLDTENVASQV CCCCCCCCCCEEEECCCCCCCCHHHHHCC >Mature Secondary Structure MIRIISLSSFNNMSDNINHSDNFDDFFENLGYRFDESFSDGWDRLTQSIKDLYNRTTDKL CEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EDELALPLTQAYVNDALKTYVTDNVKAILELRVEIHEDWFRLYCTVDAGGIYAEVASNFR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCHHHHHHCCCE LVHAQLDRNVQRFVFGQLTYTDILNLRCESFLKRQGIKLFIWFYHRILKKDPLGFILSYI EEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCHHHHHHHH DIARAKNEIIYIDINRWLKSNKKIIGMLHKAQVNYGELEEEQLILKAQINYRDLLSSNSN HHHHCCCCEEEEEEHHHHCCCCHHHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHCCCCC EDIISEKDEPVQVQGPVHPLDTENVASQV CCCCCCCCCCEEEECCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA