| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005380
Identifier: 93005380
GI number: 93005380
Start: 647767
End: 648525
Strand: Reverse
Name: 93005380
Synonym: Pcryo_0550
Alternate gene names: NA
Gene position: 648525-647767 (Counterclockwise)
Preceding gene: 93005389
Following gene: 93005379
Centisome position: 21.19
GC content: 41.9
Gene sequence:
>759_bases ATGACGAAGATTATTAGCAATCTTGATGTAACGACGTTGGTGGTTGATAATCCAATAGGTAAGGAGAATCCGCCACTGTT ATCTTTAAATTCTACTAACTATAATAATCAGGCGCTGCCGACCCAACATTTATTACAATCCTCTGATTTTGAGGTTAATT GGGAACACAAGCTGACAGATAAACAGTTGGATACGTTTGTTGATGATGGTTGGCTCATTATTGACGATGTCTTTGAACGA AAAGCCTTAGTAGCACTGCAAGCGGAAAGTGGCTTTATTGATTATCGTGATGCTCAGCTAACGGCGGGTATTCGTATCAG TGATATTCGCGGTGATAAAATACGCTGGATTACCAAAGACTTTTTTGCAGGGTTTTATTATCTGCACAGTATCAATGCGC TTGCTACTTTGTTCAATCAAAGCTTGTACGCTGGTATTCGCCATAGCGAGGCGCATTATGCGTGTTATCCAGTAGGTTTT GGCTATCTATGGCATAGTGATAATCCGGCTGGACGTAATGAACGCGTTGTCTCGGCAGTGTTTTATCTTAATGATGAGTG GTCAGCAAGTGACGGCGGCGCGCTAGAAATCGTTGATAAACATGGTGTCCATCATAATGTAATGCCTGTCGCTAATAGGC TTGTAATATTTGATAGTGACTTACAGCATCAAGTGCAAATCGCCCATCGTCAGCGTTATTCTATCGCGACTTGGATGCGC CGTGATGGCTTAGTGCCTTTTATTGAAGACGTTATTTAA
Upstream 100 bases:
>100_bases GCTAAAAGATAACGATGGTTTTGGTAAAAAGGCATAGATTGGTCGGGTAAAGGTATAGATTGACGGTGTAATGACAGATA ATGGACGATAGCGAGACAAA
Downstream 100 bases:
>100_bases GTACTGTAATATTCATAAAGACTCTCTTACCATCTACATCTAAGCATACTATCTATCCCTCTATAATAAAAAAGGCTTCC CATGTCAGATTTTGATAAAA
Product: 2OG-Fe(II) oxygenase
Products: NA
Alternate protein names: 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Alpha Subunit; Proline Hydroxylase; Oxidoreductase; SM-20 Domain-Containing Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; SM-20-Related Protein; 2OG-Fe(II) Oxygenase Superfamily Protein; SM-20-Like Protein; SM-20 Domain Protein; 2OG-Fe(II) Oxygenase Family Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; 2OG-Fe(II) Oxygenase Family; 2og-Fe(Ii) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit Homologue
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTKIISNLDVTTLVVDNPIGKENPPLLSLNSTNYNNQALPTQHLLQSSDFEVNWEHKLTDKQLDTFVDDGWLIIDDVFER KALVALQAESGFIDYRDAQLTAGIRISDIRGDKIRWITKDFFAGFYYLHSINALATLFNQSLYAGIRHSEAHYACYPVGF GYLWHSDNPAGRNERVVSAVFYLNDEWSASDGGALEIVDKHGVHHNVMPVANRLVIFDSDLQHQVQIAHRQRYSIATWMR RDGLVPFIEDVI
Sequences:
>Translated_252_residues MTKIISNLDVTTLVVDNPIGKENPPLLSLNSTNYNNQALPTQHLLQSSDFEVNWEHKLTDKQLDTFVDDGWLIIDDVFER KALVALQAESGFIDYRDAQLTAGIRISDIRGDKIRWITKDFFAGFYYLHSINALATLFNQSLYAGIRHSEAHYACYPVGF GYLWHSDNPAGRNERVVSAVFYLNDEWSASDGGALEIVDKHGVHHNVMPVANRLVIFDSDLQHQVQIAHRQRYSIATWMR RDGLVPFIEDVI >Mature_251_residues TKIISNLDVTTLVVDNPIGKENPPLLSLNSTNYNNQALPTQHLLQSSDFEVNWEHKLTDKQLDTFVDDGWLIIDDVFERK ALVALQAESGFIDYRDAQLTAGIRISDIRGDKIRWITKDFFAGFYYLHSINALATLFNQSLYAGIRHSEAHYACYPVGFG YLWHSDNPAGRNERVVSAVFYLNDEWSASDGGALEIVDKHGVHHNVMPVANRLVIFDSDLQHQVQIAHRQRYSIATWMRR DGLVPFIEDVI
Specific function: Unknown
COG id: COG3751
COG function: function code O; Predicted proline hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI11545787, Length=220, Percent_Identity=30.4545454545455, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI16604260, Length=163, Percent_Identity=34.9693251533742, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI145701012, Length=163, Percent_Identity=34.9693251533742, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI13489073, Length=255, Percent_Identity=28.6274509803922, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24644170, Length=150, Percent_Identity=36, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI21356463, Length=151, Percent_Identity=35.7615894039735, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24644165, Length=150, Percent_Identity=36, Blast_Score=78, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28720; Mature: 28588
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIISNLDVTTLVVDNPIGKENPPLLSLNSTNYNNQALPTQHLLQSSDFEVNWEHKLTD CCCEECCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCEEEECCCCCH KQLDTFVDDGWLIIDDVFERKALVALQAESGFIDYRDAQLTAGIRISDIRGDKIRWITKD HHHHHHHCCCEEEEEHHHCCEEEEEEECCCCCEEECCCEEECCEEEEECCCCEEEEEHHH FFAGFYYLHSINALATLFNQSLYAGIRHSEAHYACYPVGFGYLWHSDNPAGRNERVVSAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEECCCCCCCCCEEEEEE FYLNDEWSASDGGALEIVDKHGVHHNVMPVANRLVIFDSDLQHQVQIAHRQRYSIATWMR EEECCCCCCCCCCEEEEEECCCCCCCCHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHH RDGLVPFIEDVI HCCCCHHHHHCC >Mature Secondary Structure TKIISNLDVTTLVVDNPIGKENPPLLSLNSTNYNNQALPTQHLLQSSDFEVNWEHKLTD CCEECCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCEEEECCCCCH KQLDTFVDDGWLIIDDVFERKALVALQAESGFIDYRDAQLTAGIRISDIRGDKIRWITKD HHHHHHHCCCEEEEEHHHCCEEEEEEECCCCCEEECCCEEECCEEEEECCCCEEEEEHHH FFAGFYYLHSINALATLFNQSLYAGIRHSEAHYACYPVGFGYLWHSDNPAGRNERVVSAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEECCCCCCCCCEEEEEE FYLNDEWSASDGGALEIVDKHGVHHNVMPVANRLVIFDSDLQHQVQIAHRQRYSIATWMR EEECCCCCCCCCCEEEEEECCCCCCCCHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHH RDGLVPFIEDVI HCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA