| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is manB [H]
Identifier: 93004951
GI number: 93004951
Start: 142740
End: 144233
Strand: Reverse
Name: manB [H]
Synonym: Pcryo_0120
Alternate gene names: 93004951
Gene position: 144233-142740 (Counterclockwise)
Preceding gene: 93004960
Following gene: 93004937
Centisome position: 4.71
GC content: 44.18
Gene sequence:
>1494_bases ATGCCCACATCCGATACGAATAATGCCAGCTATGCGACTCAAACCCAGTTCGCACCGATTAACATTGATTCATTTAAAGC TTACGATATCCGCGGCGAGCTTGGTGTCAATCTCGATGAAGCTATCGCCTACCGTATCGGCCGTGCCTTTGCCCAAATTT TATTCGAGCGTTATAACAGTGCCGATAATGATGCTACCGCTGAACTGAAAAACTTAAAATCAGCTATCGTTATTGGTAGC GATATTCGCCATTCAAGTGAACAGTTAAAACAAGCGACTATCAAAGGCATGCTAGATGCTGGCGTCGATGTTATCGACTT GGGAATGACAGGTACAGAAGAGGTGTATTTTGCCACCAGCTACTATCAAGCGTTGGGCGGTATCGAAGTCACTGCCAGTC ATAATCCGATTAATTATAATGGCTTAAAATTGGTCAAAGAGCACTCAAAACCGATTAGCGCCGATGATGGTTTGGCAGAG ATTCAAGCGTTGGCGGAATCGGGGCAATTTACCACTGCTAACACCTTAGGCAACCTACAATTACTGACGGATAAAAGCGC CTATATCAATCATGTGATGACTTTCATCGATACTGACAAATTAAAACCACTTAAACTGGTTATTAATTCAGGCAATGGCA GCGCCGGTCCCGTGGTTGATTTATTAATCGAAAAGTTAGCACAAGCTGGCGCACCGATTGAAGTCATTAAACTGCATCAT GCCCCTGACGGTAGTTTTCCAAATGGCATCCCTAATCCGATGATTTTGGCTAATAGAACCGCCACCCAGCAAGCGGTGTT AGAAAATAAAGCCGACCTTGGGATTGCCTTTGATGGCGATTTTGACCGCTGCTTTTTATTCGATGAATACGGCGAATTTA TCGATGGTAGCTATGTCGTTGGGATGCTGGCGCAAGCCTTTTTAAATAAGTATGCAGGCGAGTCGATTGTTTATGATCCA CGGGTGATTTATAACACCGAAGCCGTCATCCATGAGCATAACGGTAAGGCGGTTATTAGTAAATCTGGGCACTCATTTAT CAAGCAGGTGATGCGTGATTCTGGTGCGGTTTATGGTGGCGAGATGTCAGCGCATCATTATTTTCGCGATTTTTTCTACT GCGATAGCGGTATGATTCCTTGGCTGCTGACCATTGAGCTATTATCGATTACCGGTAAAACCTTGTCAGAATTGGTCAGT GGTTATATTGCAGCCTATCCAAGCTCAGGCGAGATGAACTTTCATCTGACCACGCATGATGCGCAGACGATTATTAGCGC TATCGAAGAAAAGTTTAGTACCGAAAACCCAACCAAATCGATGCTCGATGGTTTGAGTTTAAACTTTGGCGAATGGCGTT TTAACTTACGCGCCTCAAATACTGAACCATTAGTTCGGTTAAATATTGAAAGTCGCGGTGATGAAGATTTACTACAGACC AAGACCCAGGAGATTCAACAATGGCTTGCCAGTAAAGGTGCTGTACCTGCTTAA
Upstream 100 bases:
>100_bases ACGATTTTGTCGTTAGTGTAGCATTGAACACTGATTAGCTTATAATTGTGTAACCTACTTAATTATCATCTCACTGCTTA AACGCAAGGATTTTATCGTT
Downstream 100 bases:
>100_bases CTTCAATAGCTGCAATGCTAAATAAAGACATTCTAAACTTATAAAGATAAAAAAAGCGCCGATTAATTTTTATATTAATC GGCGCTTTTATTTAGCTTTA
Product: phosphomannomutase
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MPTSDTNNASYATQTQFAPINIDSFKAYDIRGELGVNLDEAIAYRIGRAFAQILFERYNSADNDATAELKNLKSAIVIGS DIRHSSEQLKQATIKGMLDAGVDVIDLGMTGTEEVYFATSYYQALGGIEVTASHNPINYNGLKLVKEHSKPISADDGLAE IQALAESGQFTTANTLGNLQLLTDKSAYINHVMTFIDTDKLKPLKLVINSGNGSAGPVVDLLIEKLAQAGAPIEVIKLHH APDGSFPNGIPNPMILANRTATQQAVLENKADLGIAFDGDFDRCFLFDEYGEFIDGSYVVGMLAQAFLNKYAGESIVYDP RVIYNTEAVIHEHNGKAVISKSGHSFIKQVMRDSGAVYGGEMSAHHYFRDFFYCDSGMIPWLLTIELLSITGKTLSELVS GYIAAYPSSGEMNFHLTTHDAQTIISAIEEKFSTENPTKSMLDGLSLNFGEWRFNLRASNTEPLVRLNIESRGDEDLLQT KTQEIQQWLASKGAVPA
Sequences:
>Translated_497_residues MPTSDTNNASYATQTQFAPINIDSFKAYDIRGELGVNLDEAIAYRIGRAFAQILFERYNSADNDATAELKNLKSAIVIGS DIRHSSEQLKQATIKGMLDAGVDVIDLGMTGTEEVYFATSYYQALGGIEVTASHNPINYNGLKLVKEHSKPISADDGLAE IQALAESGQFTTANTLGNLQLLTDKSAYINHVMTFIDTDKLKPLKLVINSGNGSAGPVVDLLIEKLAQAGAPIEVIKLHH APDGSFPNGIPNPMILANRTATQQAVLENKADLGIAFDGDFDRCFLFDEYGEFIDGSYVVGMLAQAFLNKYAGESIVYDP RVIYNTEAVIHEHNGKAVISKSGHSFIKQVMRDSGAVYGGEMSAHHYFRDFFYCDSGMIPWLLTIELLSITGKTLSELVS GYIAAYPSSGEMNFHLTTHDAQTIISAIEEKFSTENPTKSMLDGLSLNFGEWRFNLRASNTEPLVRLNIESRGDEDLLQT KTQEIQQWLASKGAVPA >Mature_496_residues PTSDTNNASYATQTQFAPINIDSFKAYDIRGELGVNLDEAIAYRIGRAFAQILFERYNSADNDATAELKNLKSAIVIGSD IRHSSEQLKQATIKGMLDAGVDVIDLGMTGTEEVYFATSYYQALGGIEVTASHNPINYNGLKLVKEHSKPISADDGLAEI QALAESGQFTTANTLGNLQLLTDKSAYINHVMTFIDTDKLKPLKLVINSGNGSAGPVVDLLIEKLAQAGAPIEVIKLHHA PDGSFPNGIPNPMILANRTATQQAVLENKADLGIAFDGDFDRCFLFDEYGEFIDGSYVVGMLAQAFLNKYAGESIVYDPR VIYNTEAVIHEHNGKAVISKSGHSFIKQVMRDSGAVYGGEMSAHHYFRDFFYCDSGMIPWLLTIELLSITGKTLSELVSG YIAAYPSSGEMNFHLTTHDAQTIISAIEEKFSTENPTKSMLDGLSLNFGEWRFNLRASNTEPLVRLNIESRGDEDLLQTK TQEIQQWLASKGAVPA
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O antigen [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=472, Percent_Identity=52.9661016949153, Blast_Score=514, Evalue=1e-147, Organism=Escherichia coli, GI1789566, Length=405, Percent_Identity=28.1481481481481, Blast_Score=87, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 54351; Mature: 54220
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSDTNNASYATQTQFAPINIDSFKAYDIRGELGVNLDEAIAYRIGRAFAQILFERYNS CCCCCCCCCCCEECCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC ADNDATAELKNLKSAIVIGSDIRHSSEQLKQATIKGMLDAGVDVIDLGMTGTEEVYFATS CCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEHH YYQALGGIEVTASHNPINYNGLKLVKEHSKPISADDGLAEIQALAESGQFTTANTLGNLQ HHHHHCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCEE LLTDKSAYINHVMTFIDTDKLKPLKLVINSGNGSAGPVVDLLIEKLAQAGAPIEVIKLHH EEECCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEE APDGSFPNGIPNPMILANRTATQQAVLENKADLGIAFDGDFDRCFLFDEYGEFIDGSYVV CCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHCCHHHH GMLAQAFLNKYAGESIVYDPRVIYNTEAVIHEHNGKAVISKSGHSFIKQVMRDSGAVYGG HHHHHHHHHHHCCCCEEECCEEEEECEEEEEECCCCEEEECCCHHHHHHHHHHCCCEECC EMSAHHYFRDFFYCDSGMIPWLLTIELLSITGKTLSELVSGYIAAYPSSGEMNFHLTTHD CCHHHHHHHHHEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCEEEEEECCH AQTIISAIEEKFSTENPTKSMLDGLSLNFGEWRFNLRASNTEPLVRLNIESRGDEDLLQT HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHH KTQEIQQWLASKGAVPA HHHHHHHHHHHCCCCCC >Mature Secondary Structure PTSDTNNASYATQTQFAPINIDSFKAYDIRGELGVNLDEAIAYRIGRAFAQILFERYNS CCCCCCCCCCEECCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC ADNDATAELKNLKSAIVIGSDIRHSSEQLKQATIKGMLDAGVDVIDLGMTGTEEVYFATS CCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEHH YYQALGGIEVTASHNPINYNGLKLVKEHSKPISADDGLAEIQALAESGQFTTANTLGNLQ HHHHHCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCEE LLTDKSAYINHVMTFIDTDKLKPLKLVINSGNGSAGPVVDLLIEKLAQAGAPIEVIKLHH EEECCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEE APDGSFPNGIPNPMILANRTATQQAVLENKADLGIAFDGDFDRCFLFDEYGEFIDGSYVV CCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHCCHHHH GMLAQAFLNKYAGESIVYDPRVIYNTEAVIHEHNGKAVISKSGHSFIKQVMRDSGAVYGG HHHHHHHHHHHCCCCEEECCEEEEECEEEEEECCCCEEEECCCHHHHHHHHHHCCCEECC EMSAHHYFRDFFYCDSGMIPWLLTIELLSITGKTLSELVSGYIAAYPSSGEMNFHLTTHD CCHHHHHHHHHEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCEEEEEECCH AQTIISAIEEKFSTENPTKSMLDGLSLNFGEWRFNLRASNTEPLVRLNIESRGDEDLLQT HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHH KTQEIQQWLASKGAVPA HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1383393 [H]