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The map label for this gene is 93004919

Identifier: 93004919

GI number: 93004919

Start: 101271

End: 101897

Strand: Reverse

Name: 93004919

Synonym: Pcryo_0088

Alternate gene names: NA

Gene position: 101897-101271 (Counterclockwise)

Preceding gene: 93004920

Following gene: 93004915

Centisome position: 3.33

GC content: 38.92

Gene sequence:

>627_bases
ATGACTGACATTTTTGCGCCCAAGCTGACTGACAACCTTTTGCCTTATGACGGTCTGGTAAATGATTTAGGTATTGTGAT
CGATTATCCCAGCCCTTTATTTTATAACTTGGTGACTGAGTTACCTTGGCAAGAAGATATCGTTACTTTATTTGGCAAGA
CACATATCACAACGCGTCAAATCGTTTGGATGGGTGATAGCGATATTGATTATCAGTACTCTGGTCATACGCGTCAAACC
ATACCTTGGACAGATACTGTGTTTCATGTGAAACATCATATCGAACAGAAATTATTAGATCTTGGAATTGATGCCAATTT
TAATTCCTGTTTACTCAACTATTATCCTTCTGGTGAGGATGGTATGGGCTATCATGCCGATGATGAACGAGAGCTTGGTG
AGCAACCAGTTATTGCTTCATTATCTCTTGGTGCTACGCGTAAATTTGTCTTTAAGCATAAAAAAACTCAAGATAAAGTT
GAGCTTTATCTTGAGTCAGGTCAGCTAATTGTCATGCATGGTGATACCCAAAGCTTTTGGAAGCACAGTATTACCAAGAC
TAAAAAGGTAACCACAGGACGCATTAGCCTAACCTTTCGGCAAATATATCCAAATAATCGAAGCTAA

Upstream 100 bases:

>100_bases
TTTCCTTACCAGAGTATGGACATTTATTACCCATGGAGGCGCCAGAAATCTGCGCTCAAATTATTAATGAGCATTATCAG
AGCAATAAATAAGCTGACCT

Downstream 100 bases:

>100_bases
CCATTAGCTAAATCTATTATCCAATCAACCTCGGCTCAACTGACTTTCAATACCAATTTACCAAAAGCATCGCCTTTTTG
CAGCTCATGATGGGCGATAA

Product: 2OG-Fe(II) oxygenase

Products: NA

Alternate protein names: Alkylated DNA Repair Protein; DNA-N1-Methyladenine Dioxygenase; DNA Repair System Specific For Alkylated DNA; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Alkylated DNA Repair Protein-Like Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; Alkylated DNA Repair Protein AlkB; CRISPR-Associated Family Protein; DNA Repair System Specific For Alkylated DNA Protein; 2OG-Fe(II) Oxygenase Family Protein; DNA Repair System Protein

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTDIFAPKLTDNLLPYDGLVNDLGIVIDYPSPLFYNLVTELPWQEDIVTLFGKTHITTRQIVWMGDSDIDYQYSGHTRQT
IPWTDTVFHVKHHIEQKLLDLGIDANFNSCLLNYYPSGEDGMGYHADDERELGEQPVIASLSLGATRKFVFKHKKTQDKV
ELYLESGQLIVMHGDTQSFWKHSITKTKKVTTGRISLTFRQIYPNNRS

Sequences:

>Translated_208_residues
MTDIFAPKLTDNLLPYDGLVNDLGIVIDYPSPLFYNLVTELPWQEDIVTLFGKTHITTRQIVWMGDSDIDYQYSGHTRQT
IPWTDTVFHVKHHIEQKLLDLGIDANFNSCLLNYYPSGEDGMGYHADDERELGEQPVIASLSLGATRKFVFKHKKTQDKV
ELYLESGQLIVMHGDTQSFWKHSITKTKKVTTGRISLTFRQIYPNNRS
>Mature_207_residues
TDIFAPKLTDNLLPYDGLVNDLGIVIDYPSPLFYNLVTELPWQEDIVTLFGKTHITTRQIVWMGDSDIDYQYSGHTRQTI
PWTDTVFHVKHHIEQKLLDLGIDANFNSCLLNYYPSGEDGMGYHADDERELGEQPVIASLSLGATRKFVFKHKKTQDKVE
LYLESGQLIVMHGDTQSFWKHSITKTKKVTTGRISLTFRQIYPNNRS

Specific function: Unknown

COG id: COG3145

COG function: function code L; Alkylated DNA repair protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224451107, Length=164, Percent_Identity=38.4146341463415, Blast_Score=107, Evalue=9e-24,
Organism=Homo sapiens, GI48717226, Length=164, Percent_Identity=38.4146341463415, Blast_Score=107, Evalue=9e-24,
Organism=Homo sapiens, GI224451103, Length=164, Percent_Identity=38.4146341463415, Blast_Score=107, Evalue=9e-24,
Organism=Homo sapiens, GI21040275, Length=185, Percent_Identity=32.4324324324324, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23911; Mature: 23780

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIFAPKLTDNLLPYDGLVNDLGIVIDYPSPLFYNLVTELPWQEDIVTLFGKTHITTRQ
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCEEEEE
IVWMGDSDIDYQYSGHTRQTIPWTDTVFHVKHHIEQKLLDLGIDANFNSCLLNYYPSGED
EEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
GMGYHADDERELGEQPVIASLSLGATRKFVFKHKKTQDKVELYLESGQLIVMHGDTQSFW
CCCCCCCCHHHCCCCCEEEEEECCCHHHEEHHCCCCCCEEEEEEECCCEEEEECCCHHHH
KHSITKTKKVTTGRISLTFRQIYPNNRS
HHHHCCCCEEEEEEEEEEEEEECCCCCC
>Mature Secondary Structure 
TDIFAPKLTDNLLPYDGLVNDLGIVIDYPSPLFYNLVTELPWQEDIVTLFGKTHITTRQ
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCEEEEE
IVWMGDSDIDYQYSGHTRQTIPWTDTVFHVKHHIEQKLLDLGIDANFNSCLLNYYPSGED
EEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
GMGYHADDERELGEQPVIASLSLGATRKFVFKHKKTQDKVELYLESGQLIVMHGDTQSFW
CCCCCCCCHHHCCCCCEEEEEECCCHHHEEHHCCCCCCEEEEEEECCCEEEEECCCHHHH
KHSITKTKKVTTGRISLTFRQIYPNNRS
HHHHCCCCEEEEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA