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The map label for this gene is 93004881

Identifier: 93004881

GI number: 93004881

Start: 58940

End: 59395

Strand: Reverse

Name: 93004881

Synonym: Pcryo_0050

Alternate gene names: NA

Gene position: 59395-58940 (Counterclockwise)

Preceding gene: 93004882

Following gene: 93004880

Centisome position: 1.94

GC content: 39.47

Gene sequence:

>456_bases
ATGAACGTTAGCTTCTATGTATTAACTGAGAATAAAGCCCAAGATTTCTTGGGCTTTATTTGTCAGCTGACCCAAACCGC
GCTTAATAAAAGCAATCAATCGTTGTTAATTCTTATCGACGATGATGAATTGCTATCGACGCTTGATAAGGCATTATGGG
AGCAAGAGGCTACTAGCTTTATCCCCCATCAACGCCTTTTGAATGCTGATACTGATATCAACCATAAAGCGTTAGCGCCT
GTACTTCTTAGCAATTATATGCCTGCTAACTTTAAAGGTATGGTTCTTAATACCACTATACATCCAGTAAGCACTTTTAT
GACAGCTACTATCAATGCGAAACCTACTCGTGTCCTTGAGCTGATAAAACCTGATGCAGCTAGTGTGCAAGAAGGTCGTC
ATAAATATAAAAGCTATCAACAACTCGGCTATGAGCTGACCCACTTTACAGTTTAA

Upstream 100 bases:

>100_bases
CCTGTACCGTTATTTATGCAATATCTGAGAAATAGTGCAAACATGGCATAACTTATTAATGAGAACCAATTAATGAAAAC
CAATTAATGAAAATCAGTTT

Downstream 100 bases:

>100_bases
TTCCTCAAACCGCTTTATTTGTTACGATAAAATCATTCTTTTTGCCACATATAATGCCTTTTCTTTAGCTCTATCATCCC
AGTCAGATGCGGGTTAAAGG

Product: putative DNA polymerase III, chi subunit

Products: NA

Alternate protein names: DNA Polymerase III Chi Subunit HolC

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNVSFYVLTENKAQDFLGFICQLTQTALNKSNQSLLILIDDDELLSTLDKALWEQEATSFIPHQRLLNADTDINHKALAP
VLLSNYMPANFKGMVLNTTIHPVSTFMTATINAKPTRVLELIKPDAASVQEGRHKYKSYQQLGYELTHFTV

Sequences:

>Translated_151_residues
MNVSFYVLTENKAQDFLGFICQLTQTALNKSNQSLLILIDDDELLSTLDKALWEQEATSFIPHQRLLNADTDINHKALAP
VLLSNYMPANFKGMVLNTTIHPVSTFMTATINAKPTRVLELIKPDAASVQEGRHKYKSYQQLGYELTHFTV
>Mature_151_residues
MNVSFYVLTENKAQDFLGFICQLTQTALNKSNQSLLILIDDDELLSTLDKALWEQEATSFIPHQRLLNADTDINHKALAP
VLLSNYMPANFKGMVLNTTIHPVSTFMTATINAKPTRVLELIKPDAASVQEGRHKYKSYQQLGYELTHFTV

Specific function: Unknown

COG id: COG2927

COG function: function code L; DNA polymerase III, chi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17043; Mature: 17043

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSFYVLTENKAQDFLGFICQLTQTALNKSNQSLLILIDDDELLSTLDKALWEQEATSF
CCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
IPHQRLLNADTDINHKALAPVLLSNYMPANFKGMVLNTTIHPVSTFMTATINAKPTRVLE
CCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHEEECCCCHHHHHH
LIKPDAASVQEGRHKYKSYQQLGYELTHFTV
HHCCCHHHHHHHHHHHHHHHHHCCHHHEECC
>Mature Secondary Structure
MNVSFYVLTENKAQDFLGFICQLTQTALNKSNQSLLILIDDDELLSTLDKALWEQEATSF
CCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
IPHQRLLNADTDINHKALAPVLLSNYMPANFKGMVLNTTIHPVSTFMTATINAKPTRVLE
CCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHEEECCCCHHHHHH
LIKPDAASVQEGRHKYKSYQQLGYELTHFTV
HHCCCHHHHHHHHHHHHHHHHHCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA