| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is yeaQ [C]
Identifier: 93004870
GI number: 93004870
Start: 46410
End: 46664
Strand: Reverse
Name: yeaQ [C]
Synonym: Pcryo_0039
Alternate gene names: 93004870
Gene position: 46664-46410 (Counterclockwise)
Preceding gene: 93004871
Following gene: 93004869
Centisome position: 1.53
GC content: 41.57
Gene sequence:
>255_bases ATGAGCTTTATTTGGATGATTATTGTTGGTCTGGTTGCAGGTTTATTGGCACGTGCGATTAAGCCAGGTAGCGATCCTAT GGGTTGGATTATGACGATTGTATTGGGTATCGTTGGTGCGATGCTTGGTGGTTTTGTTGCTGGCCTAATTGGTATCAATG CTGATGGCGGTTTCACTGGTCTAATCTTCTCAGTAATTGGTGCGATTATATTACTGTTCATCTATGAGATGATTATGAGT AAACGTCGCGTATAA
Upstream 100 bases:
>100_bases GTAACATTTTTTGCTTATTTCTTGATCTCGATAATGTTTACAATGGATTCAACAAAATAAGTAAACCATTATAAATGATA GACACTTTAGGAGAATTGAT
Downstream 100 bases:
>100_bases TTGGACACAGCTAAACAGCTAATACATTTCAATAACGAATACATAAAATAAAGGTCTTGTGCAATCAAGGCCTTTTTTAT TGTTTCAAATTCCTCTATCA
Product: transglycosylase-associated protein
Products: NA
Alternate protein names: Transglycosylase Associated Family Protein; Transglycosylase Associated Protein
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSFIWMIIVGLVAGLLARAIKPGSDPMGWIMTIVLGIVGAMLGGFVAGLIGINADGGFTGLIFSVIGAIILLFIYEMIMS KRRV
Sequences:
>Translated_84_residues MSFIWMIIVGLVAGLLARAIKPGSDPMGWIMTIVLGIVGAMLGGFVAGLIGINADGGFTGLIFSVIGAIILLFIYEMIMS KRRV >Mature_83_residues SFIWMIIVGLVAGLLARAIKPGSDPMGWIMTIVLGIVGAMLGGFVAGLIGINADGGFTGLIFSVIGAIILLFIYEMIMSK RRV
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8857; Mature: 8726
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFIWMIIVGLVAGLLARAIKPGSDPMGWIMTIVLGIVGAMLGGFVAGLIGINADGGFTG CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LIFSVIGAIILLFIYEMIMSKRRV HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFIWMIIVGLVAGLLARAIKPGSDPMGWIMTIVLGIVGAMLGGFVAGLIGINADGGFTG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LIFSVIGAIILLFIYEMIMSKRRV HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA