| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92115420
Identifier: 92115420
GI number: 92115420
Start: 3681456
End: 3683069
Strand: Direct
Name: 92115420
Synonym: Csal_3305
Alternate gene names: NA
Gene position: 3681456-3683069 (Clockwise)
Preceding gene: 92115419
Following gene: 92115422
Centisome position: 99.59
GC content: 63.69
Gene sequence:
>1614_bases GTGGCGGATGAACGGGCAATGGAACGACGGGACGCGGGGGAACGCTCAGTGAGCCAGGCATTGATCGAGGCATTGCGCCA GGGCCGGGGATTCGACCATCCGGTGAGCCGGATCGAGGTGTACGAGACGCATGTTTCATGGGTCATCCTCACGGGGGACT ATGCCTACAAGATCAAGAAACCGCTGGATTTCGGCAGCTTTCTGGACTTTTCCACGCTGGAAAAACGGCGCCGGCTCTGC GAGCAGGAGGTGCGTCTCAACCGTCGCCTTGCCCCGGCGTTGTACCTCGACACGGTCGCGATCACCGGTACGCCCGAGGC GCCGAGCCTGGGAGGGAGCGGTACGCCGTTCGAGTACGCGGTCAAGATGCGTCAATTCAGCAATCGTCACTTGTTCAGCA CCTTGCAGGCCAGCGGCGAGTTGTCCGAGGAACTGCTCGACGATCTCGTCGCGCAACTGGTGGCCTTCCACGAGGAGGCG CCGCGGGTGAGCGGGGACAGTCAACTGGGCTCGCCGGATACCGTGCGGCGGACCCTGGACCGTGAGTTTCGCTTGATCGA GGCGCGTCTCGAGGGACAGGAGGAACGTGAGCGACTATCGCGTCTCGAGACCTGGAGCCTGGATAGCTTCGCGCGGCTCG AACACGAATTCGAGCGGCGCTGGCGCGAGGGCTACGTGCGCGAAACCCATGGCGATATCCATCTCGGCAACGCGGTGCAT TTCGAGGGACGCGCGCTGCTGTTCGACGGGCTGGAGTTCAACGCCGAGCTGCGCTGGAACGATGTCGGCTGCGAGCTGGC ATTCTTGTTGATGGATCTCGAGGCACGTGGCGAGCAGGCCTATGCCAACCATGTCCTCAATCGCTATCTGGAACTCTCCG GCGATTACGAACTGGTACGCCTGCTGGCCTATTACAAGCTGTACCGTGCCTTGGTACGCGTCAAGGTGGCGCTCCTGCAT TATCACCAGGAGCAGTTGACGCCCGAGGAGCGCGAGGCCGTGCTGGCGGATTACCACTGCTACATGGCCTTGGCCGAGCG CTACAGCGAGTTTCGCTTTCCGTACCTGGTGGTCGGGGTCGGGGTTTCCGGCAGCGGCAAGAGCCGTTTCACCGGCGAGA TGGTGCGTCGCCTGGGGGGCGTACGAGTGCGCTCGGATATCGAACGCAAGCGGCTGTATGGCTTCGAGGCCCAGGCCGAT ACGCGAGCGGGAGGCGATATCTACACGCCCCAGGCGAGCGAGCGTACCTATGCGCGCCTGGCCGAGCTGGCGGGCATCCT GCTGGAGTCGGGTCTGCCGGCCTGCGTCGATGCCACCTGTCTGACACGCGCTCAGCGTGCGCAGCTGTGCTTCGAAGCCG AACGACGCGGGCTGGCCGTGCTGATGGTGAGCTTCGAGGCCGATACCCAGACCTTGCGTGCGCGCATCGAGAAACGGGCC CAGCGCGGCGGCGATCCGTCGGAGGCGGGCCTCGAGGTGCTCGAACGTCAGCTGGCACGCTTCGAGCCTTTCGTCGACGA CGAACTGAGTCACCTGGTGCATCTCGATACCACGGCACCGGACGCCAATCTCACGCTGGTGTCGATGATCCAGGAGCGTA TTCAGCTTCGTTGA
Upstream 100 bases:
>100_bases TTCGAGGCGGGCTTCATGTCCAGCGCGCACACGCCCGACGATATCCAGGCCACGCTGGATGCCGCCGAGCAGGTATTGGC GACGCTCGAGAACGCCTGAG
Downstream 100 bases:
>100_bases AGTTCGACTCGCGCATGTCATCGCAATGTCGTGTGGTCGACACGCGTTCGTCACATTCTCGCGACATCCTGTTCTACGTC TGTTCAGGGTAACCATGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MADERAMERRDAGERSVSQALIEALRQGRGFDHPVSRIEVYETHVSWVILTGDYAYKIKKPLDFGSFLDFSTLEKRRRLC EQEVRLNRRLAPALYLDTVAITGTPEAPSLGGSGTPFEYAVKMRQFSNRHLFSTLQASGELSEELLDDLVAQLVAFHEEA PRVSGDSQLGSPDTVRRTLDREFRLIEARLEGQEERERLSRLETWSLDSFARLEHEFERRWREGYVRETHGDIHLGNAVH FEGRALLFDGLEFNAELRWNDVGCELAFLLMDLEARGEQAYANHVLNRYLELSGDYELVRLLAYYKLYRALVRVKVALLH YHQEQLTPEEREAVLADYHCYMALAERYSEFRFPYLVVGVGVSGSGKSRFTGEMVRRLGGVRVRSDIERKRLYGFEAQAD TRAGGDIYTPQASERTYARLAELAGILLESGLPACVDATCLTRAQRAQLCFEAERRGLAVLMVSFEADTQTLRARIEKRA QRGGDPSEAGLEVLERQLARFEPFVDDELSHLVHLDTTAPDANLTLVSMIQERIQLR
Sequences:
>Translated_537_residues MADERAMERRDAGERSVSQALIEALRQGRGFDHPVSRIEVYETHVSWVILTGDYAYKIKKPLDFGSFLDFSTLEKRRRLC EQEVRLNRRLAPALYLDTVAITGTPEAPSLGGSGTPFEYAVKMRQFSNRHLFSTLQASGELSEELLDDLVAQLVAFHEEA PRVSGDSQLGSPDTVRRTLDREFRLIEARLEGQEERERLSRLETWSLDSFARLEHEFERRWREGYVRETHGDIHLGNAVH FEGRALLFDGLEFNAELRWNDVGCELAFLLMDLEARGEQAYANHVLNRYLELSGDYELVRLLAYYKLYRALVRVKVALLH YHQEQLTPEEREAVLADYHCYMALAERYSEFRFPYLVVGVGVSGSGKSRFTGEMVRRLGGVRVRSDIERKRLYGFEAQAD TRAGGDIYTPQASERTYARLAELAGILLESGLPACVDATCLTRAQRAQLCFEAERRGLAVLMVSFEADTQTLRARIEKRA QRGGDPSEAGLEVLERQLARFEPFVDDELSHLVHLDTTAPDANLTLVSMIQERIQLR >Mature_536_residues ADERAMERRDAGERSVSQALIEALRQGRGFDHPVSRIEVYETHVSWVILTGDYAYKIKKPLDFGSFLDFSTLEKRRRLCE QEVRLNRRLAPALYLDTVAITGTPEAPSLGGSGTPFEYAVKMRQFSNRHLFSTLQASGELSEELLDDLVAQLVAFHEEAP RVSGDSQLGSPDTVRRTLDREFRLIEARLEGQEERERLSRLETWSLDSFARLEHEFERRWREGYVRETHGDIHLGNAVHF EGRALLFDGLEFNAELRWNDVGCELAFLLMDLEARGEQAYANHVLNRYLELSGDYELVRLLAYYKLYRALVRVKVALLHY HQEQLTPEEREAVLADYHCYMALAERYSEFRFPYLVVGVGVSGSGKSRFTGEMVRRLGGVRVRSDIERKRLYGFEAQADT RAGGDIYTPQASERTYARLAELAGILLESGLPACVDATCLTRAQRAQLCFEAERRGLAVLMVSFEADTQTLRARIEKRAQ RGGDPSEAGLEVLERQLARFEPFVDDELSHLVHLDTTAPDANLTLVSMIQERIQLR
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 61318; Mature: 61187
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADERAMERRDAGERSVSQALIEALRQGRGFDHPVSRIEVYETHVSWVILTGDYAYKIKK CCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEEEEEEECCEEEEECC PLDFGSFLDFSTLEKRRRLCEQEVRLNRRLAPALYLDTVAITGTPEAPSLGGSGTPFEYA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCHHHH VKMRQFSNRHLFSTLQASGELSEELLDDLVAQLVAFHEEAPRVSGDSQLGSPDTVRRTLD HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH REFRLIEARLEGQEERERLSRLETWSLDSFARLEHEFERRWREGYVRETHGDIHLGNAVH HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEE FEGRALLFDGLEFNAELRWNDVGCELAFLLMDLEARGEQAYANHVLNRYLELSGDYELVR ECCCEEEEECCEECCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH LLAYYKLYRALVRVKVALLHYHQEQLTPEEREAVLADYHCYMALAERYSEFRFPYLVVGV HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE GVSGSGKSRFTGEMVRRLGGVRVRSDIERKRLYGFEAQADTRAGGDIYTPQASERTYARL CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH AELAGILLESGLPACVDATCLTRAQRAQLCFEAERRGLAVLMVSFEADTQTLRARIEKRA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHH QRGGDPSEAGLEVLERQLARFEPFVDDELSHLVHLDTTAPDANLTLVSMIQERIQLR HCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure ADERAMERRDAGERSVSQALIEALRQGRGFDHPVSRIEVYETHVSWVILTGDYAYKIKK CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEEEEEEECCEEEEECC PLDFGSFLDFSTLEKRRRLCEQEVRLNRRLAPALYLDTVAITGTPEAPSLGGSGTPFEYA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCHHHH VKMRQFSNRHLFSTLQASGELSEELLDDLVAQLVAFHEEAPRVSGDSQLGSPDTVRRTLD HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH REFRLIEARLEGQEERERLSRLETWSLDSFARLEHEFERRWREGYVRETHGDIHLGNAVH HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEE FEGRALLFDGLEFNAELRWNDVGCELAFLLMDLEARGEQAYANHVLNRYLELSGDYELVR ECCCEEEEECCEECCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH LLAYYKLYRALVRVKVALLHYHQEQLTPEEREAVLADYHCYMALAERYSEFRFPYLVVGV HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE GVSGSGKSRFTGEMVRRLGGVRVRSDIERKRLYGFEAQADTRAGGDIYTPQASERTYARL CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH AELAGILLESGLPACVDATCLTRAQRAQLCFEAERRGLAVLMVSFEADTQTLRARIEKRA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHH QRGGDPSEAGLEVLERQLARFEPFVDDELSHLVHLDTTAPDANLTLVSMIQERIQLR HCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]