Definition Chromohalobacter salexigens DSM 3043 chromosome, complete genome.
Accession NC_007963
Length 3,696,649

Click here to switch to the map view.

The map label for this gene is 92115420

Identifier: 92115420

GI number: 92115420

Start: 3681456

End: 3683069

Strand: Direct

Name: 92115420

Synonym: Csal_3305

Alternate gene names: NA

Gene position: 3681456-3683069 (Clockwise)

Preceding gene: 92115419

Following gene: 92115422

Centisome position: 99.59

GC content: 63.69

Gene sequence:

>1614_bases
GTGGCGGATGAACGGGCAATGGAACGACGGGACGCGGGGGAACGCTCAGTGAGCCAGGCATTGATCGAGGCATTGCGCCA
GGGCCGGGGATTCGACCATCCGGTGAGCCGGATCGAGGTGTACGAGACGCATGTTTCATGGGTCATCCTCACGGGGGACT
ATGCCTACAAGATCAAGAAACCGCTGGATTTCGGCAGCTTTCTGGACTTTTCCACGCTGGAAAAACGGCGCCGGCTCTGC
GAGCAGGAGGTGCGTCTCAACCGTCGCCTTGCCCCGGCGTTGTACCTCGACACGGTCGCGATCACCGGTACGCCCGAGGC
GCCGAGCCTGGGAGGGAGCGGTACGCCGTTCGAGTACGCGGTCAAGATGCGTCAATTCAGCAATCGTCACTTGTTCAGCA
CCTTGCAGGCCAGCGGCGAGTTGTCCGAGGAACTGCTCGACGATCTCGTCGCGCAACTGGTGGCCTTCCACGAGGAGGCG
CCGCGGGTGAGCGGGGACAGTCAACTGGGCTCGCCGGATACCGTGCGGCGGACCCTGGACCGTGAGTTTCGCTTGATCGA
GGCGCGTCTCGAGGGACAGGAGGAACGTGAGCGACTATCGCGTCTCGAGACCTGGAGCCTGGATAGCTTCGCGCGGCTCG
AACACGAATTCGAGCGGCGCTGGCGCGAGGGCTACGTGCGCGAAACCCATGGCGATATCCATCTCGGCAACGCGGTGCAT
TTCGAGGGACGCGCGCTGCTGTTCGACGGGCTGGAGTTCAACGCCGAGCTGCGCTGGAACGATGTCGGCTGCGAGCTGGC
ATTCTTGTTGATGGATCTCGAGGCACGTGGCGAGCAGGCCTATGCCAACCATGTCCTCAATCGCTATCTGGAACTCTCCG
GCGATTACGAACTGGTACGCCTGCTGGCCTATTACAAGCTGTACCGTGCCTTGGTACGCGTCAAGGTGGCGCTCCTGCAT
TATCACCAGGAGCAGTTGACGCCCGAGGAGCGCGAGGCCGTGCTGGCGGATTACCACTGCTACATGGCCTTGGCCGAGCG
CTACAGCGAGTTTCGCTTTCCGTACCTGGTGGTCGGGGTCGGGGTTTCCGGCAGCGGCAAGAGCCGTTTCACCGGCGAGA
TGGTGCGTCGCCTGGGGGGCGTACGAGTGCGCTCGGATATCGAACGCAAGCGGCTGTATGGCTTCGAGGCCCAGGCCGAT
ACGCGAGCGGGAGGCGATATCTACACGCCCCAGGCGAGCGAGCGTACCTATGCGCGCCTGGCCGAGCTGGCGGGCATCCT
GCTGGAGTCGGGTCTGCCGGCCTGCGTCGATGCCACCTGTCTGACACGCGCTCAGCGTGCGCAGCTGTGCTTCGAAGCCG
AACGACGCGGGCTGGCCGTGCTGATGGTGAGCTTCGAGGCCGATACCCAGACCTTGCGTGCGCGCATCGAGAAACGGGCC
CAGCGCGGCGGCGATCCGTCGGAGGCGGGCCTCGAGGTGCTCGAACGTCAGCTGGCACGCTTCGAGCCTTTCGTCGACGA
CGAACTGAGTCACCTGGTGCATCTCGATACCACGGCACCGGACGCCAATCTCACGCTGGTGTCGATGATCCAGGAGCGTA
TTCAGCTTCGTTGA

Upstream 100 bases:

>100_bases
TTCGAGGCGGGCTTCATGTCCAGCGCGCACACGCCCGACGATATCCAGGCCACGCTGGATGCCGCCGAGCAGGTATTGGC
GACGCTCGAGAACGCCTGAG

Downstream 100 bases:

>100_bases
AGTTCGACTCGCGCATGTCATCGCAATGTCGTGTGGTCGACACGCGTTCGTCACATTCTCGCGACATCCTGTTCTACGTC
TGTTCAGGGTAACCATGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 536

Protein sequence:

>537_residues
MADERAMERRDAGERSVSQALIEALRQGRGFDHPVSRIEVYETHVSWVILTGDYAYKIKKPLDFGSFLDFSTLEKRRRLC
EQEVRLNRRLAPALYLDTVAITGTPEAPSLGGSGTPFEYAVKMRQFSNRHLFSTLQASGELSEELLDDLVAQLVAFHEEA
PRVSGDSQLGSPDTVRRTLDREFRLIEARLEGQEERERLSRLETWSLDSFARLEHEFERRWREGYVRETHGDIHLGNAVH
FEGRALLFDGLEFNAELRWNDVGCELAFLLMDLEARGEQAYANHVLNRYLELSGDYELVRLLAYYKLYRALVRVKVALLH
YHQEQLTPEEREAVLADYHCYMALAERYSEFRFPYLVVGVGVSGSGKSRFTGEMVRRLGGVRVRSDIERKRLYGFEAQAD
TRAGGDIYTPQASERTYARLAELAGILLESGLPACVDATCLTRAQRAQLCFEAERRGLAVLMVSFEADTQTLRARIEKRA
QRGGDPSEAGLEVLERQLARFEPFVDDELSHLVHLDTTAPDANLTLVSMIQERIQLR

Sequences:

>Translated_537_residues
MADERAMERRDAGERSVSQALIEALRQGRGFDHPVSRIEVYETHVSWVILTGDYAYKIKKPLDFGSFLDFSTLEKRRRLC
EQEVRLNRRLAPALYLDTVAITGTPEAPSLGGSGTPFEYAVKMRQFSNRHLFSTLQASGELSEELLDDLVAQLVAFHEEA
PRVSGDSQLGSPDTVRRTLDREFRLIEARLEGQEERERLSRLETWSLDSFARLEHEFERRWREGYVRETHGDIHLGNAVH
FEGRALLFDGLEFNAELRWNDVGCELAFLLMDLEARGEQAYANHVLNRYLELSGDYELVRLLAYYKLYRALVRVKVALLH
YHQEQLTPEEREAVLADYHCYMALAERYSEFRFPYLVVGVGVSGSGKSRFTGEMVRRLGGVRVRSDIERKRLYGFEAQAD
TRAGGDIYTPQASERTYARLAELAGILLESGLPACVDATCLTRAQRAQLCFEAERRGLAVLMVSFEADTQTLRARIEKRA
QRGGDPSEAGLEVLERQLARFEPFVDDELSHLVHLDTTAPDANLTLVSMIQERIQLR
>Mature_536_residues
ADERAMERRDAGERSVSQALIEALRQGRGFDHPVSRIEVYETHVSWVILTGDYAYKIKKPLDFGSFLDFSTLEKRRRLCE
QEVRLNRRLAPALYLDTVAITGTPEAPSLGGSGTPFEYAVKMRQFSNRHLFSTLQASGELSEELLDDLVAQLVAFHEEAP
RVSGDSQLGSPDTVRRTLDREFRLIEARLEGQEERERLSRLETWSLDSFARLEHEFERRWREGYVRETHGDIHLGNAVHF
EGRALLFDGLEFNAELRWNDVGCELAFLLMDLEARGEQAYANHVLNRYLELSGDYELVRLLAYYKLYRALVRVKVALLHY
HQEQLTPEEREAVLADYHCYMALAERYSEFRFPYLVVGVGVSGSGKSRFTGEMVRRLGGVRVRSDIERKRLYGFEAQADT
RAGGDIYTPQASERTYARLAELAGILLESGLPACVDATCLTRAQRAQLCFEAERRGLAVLMVSFEADTQTLRARIEKRAQ
RGGDPSEAGLEVLERQLARFEPFVDDELSHLVHLDTTAPDANLTLVSMIQERIQLR

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 61318; Mature: 61187

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADERAMERRDAGERSVSQALIEALRQGRGFDHPVSRIEVYETHVSWVILTGDYAYKIKK
CCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEEEEEEECCEEEEECC
PLDFGSFLDFSTLEKRRRLCEQEVRLNRRLAPALYLDTVAITGTPEAPSLGGSGTPFEYA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCHHHH
VKMRQFSNRHLFSTLQASGELSEELLDDLVAQLVAFHEEAPRVSGDSQLGSPDTVRRTLD
HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
REFRLIEARLEGQEERERLSRLETWSLDSFARLEHEFERRWREGYVRETHGDIHLGNAVH
HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEE
FEGRALLFDGLEFNAELRWNDVGCELAFLLMDLEARGEQAYANHVLNRYLELSGDYELVR
ECCCEEEEECCEECCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH
LLAYYKLYRALVRVKVALLHYHQEQLTPEEREAVLADYHCYMALAERYSEFRFPYLVVGV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GVSGSGKSRFTGEMVRRLGGVRVRSDIERKRLYGFEAQADTRAGGDIYTPQASERTYARL
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AELAGILLESGLPACVDATCLTRAQRAQLCFEAERRGLAVLMVSFEADTQTLRARIEKRA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHH
QRGGDPSEAGLEVLERQLARFEPFVDDELSHLVHLDTTAPDANLTLVSMIQERIQLR
HCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADERAMERRDAGERSVSQALIEALRQGRGFDHPVSRIEVYETHVSWVILTGDYAYKIKK
CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEEEEEEECCEEEEECC
PLDFGSFLDFSTLEKRRRLCEQEVRLNRRLAPALYLDTVAITGTPEAPSLGGSGTPFEYA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCHHHH
VKMRQFSNRHLFSTLQASGELSEELLDDLVAQLVAFHEEAPRVSGDSQLGSPDTVRRTLD
HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
REFRLIEARLEGQEERERLSRLETWSLDSFARLEHEFERRWREGYVRETHGDIHLGNAVH
HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEE
FEGRALLFDGLEFNAELRWNDVGCELAFLLMDLEARGEQAYANHVLNRYLELSGDYELVR
ECCCEEEEECCEECCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH
LLAYYKLYRALVRVKVALLHYHQEQLTPEEREAVLADYHCYMALAERYSEFRFPYLVVGV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GVSGSGKSRFTGEMVRRLGGVRVRSDIERKRLYGFEAQADTRAGGDIYTPQASERTYARL
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AELAGILLESGLPACVDATCLTRAQRAQLCFEAERRGLAVLMVSFEADTQTLRARIEKRA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHH
QRGGDPSEAGLEVLERQLARFEPFVDDELSHLVHLDTTAPDANLTLVSMIQERIQLR
HCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]