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The map label for this gene is 92115416

Identifier: 92115416

GI number: 92115416

Start: 3678141

End: 3678572

Strand: Direct

Name: 92115416

Synonym: Csal_3301

Alternate gene names: NA

Gene position: 3678141-3678572 (Clockwise)

Preceding gene: 92115415

Following gene: 92115417

Centisome position: 99.5

GC content: 57.64

Gene sequence:

>432_bases
ATGTATCAATGGATCTTATCGCTGCATCTCATCGCCGTCGTGACCTGGTTCGCGGCGCTGTTCTACCTGCCTCGATTGTT
TGCCTACCATGCCGATGCACGCGACCGGGGAGAGACCCAGGTGATGGCGTATTTCCTGAACATGGAGCGGCGTCTCTACA
AGGGCATCATGCTGCCCTCGATGATCGTGGCGGTCGTCTTCGGCGGGTTGTTGCTTTATCTGGTGCCGGGCTTCATGGAT
GACGAGTGGTTCTATGCCAAGTTGCTGCTGGTGGCCGGCCTGATCGGTTATCACCACGTGTGTCTGGCCTATCTCAAGCA
ATTCGCGGCCGAACGCTGCCACAAGAGCGCGACGTTCTTCCGGGCCTTCAATGGCATTCCCACGCTGCTGCTCGTGGTCA
TCATCCTGCTCGTCGTGCTCAAGCCGTTTTGA

Upstream 100 bases:

>100_bases
GAGAACTACTACCGTTACAAATGATCCCCAGCGAGGAATGTCTTCATTCGCGGACGCTGTGTCCGGCGGTGTGGGCAGGG
GCTGGCATTGAGGAGTCACC

Downstream 100 bases:

>100_bases
TGGCTGTCCCGACGCTGCCGGCGGTCCTGGTGCTGGCCGGTCACGATCCGACGGGCGGGGCGGGATTGACCGCCGACGCC
GAGGCCATTCGCGCTTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MYQWILSLHLIAVVTWFAALFYLPRLFAYHADARDRGETQVMAYFLNMERRLYKGIMLPSMIVAVVFGGLLLYLVPGFMD
DEWFYAKLLLVAGLIGYHHVCLAYLKQFAAERCHKSATFFRAFNGIPTLLLVVIILLVVLKPF

Sequences:

>Translated_143_residues
MYQWILSLHLIAVVTWFAALFYLPRLFAYHADARDRGETQVMAYFLNMERRLYKGIMLPSMIVAVVFGGLLLYLVPGFMD
DEWFYAKLLLVAGLIGYHHVCLAYLKQFAAERCHKSATFFRAFNGIPTLLLVVIILLVVLKPF
>Mature_143_residues
MYQWILSLHLIAVVTWFAALFYLPRLFAYHADARDRGETQVMAYFLNMERRLYKGIMLPSMIVAVVFGGLLLYLVPGFMD
DEWFYAKLLLVAGLIGYHHVCLAYLKQFAAERCHKSATFFRAFNGIPTLLLVVIILLVVLKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 16511; Mature: 16511

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQWILSLHLIAVVTWFAALFYLPRLFAYHADARDRGETQVMAYFLNMERRLYKGIMLPS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MIVAVVFGGLLLYLVPGFMDDEWFYAKLLLVAGLIGYHHVCLAYLKQFAAERCHKSATFF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAFNGIPTLLLVVIILLVVLKPF
HHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYQWILSLHLIAVVTWFAALFYLPRLFAYHADARDRGETQVMAYFLNMERRLYKGIMLPS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MIVAVVFGGLLLYLVPGFMDDEWFYAKLLLVAGLIGYHHVCLAYLKQFAAERCHKSATFF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAFNGIPTLLLVVIILLVVLKPF
HHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8606169 [H]