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The map label for this gene is yicC [H]

Identifier: 92115322

GI number: 92115322

Start: 3574144

End: 3575007

Strand: Direct

Name: yicC [H]

Synonym: Csal_3207

Alternate gene names: 92115322

Gene position: 3574144-3575007 (Clockwise)

Preceding gene: 92115320

Following gene: 92115325

Centisome position: 96.69

GC content: 66.9

Gene sequence:

>864_bases
ATGGCGTACAGCATGACCGCCTTCACCCGGCAGACGCAGGACGCCGACTGGGGCAGCTTGCAGCTCGAGCTGCGTTCGGT
GAATCAGCGCTATCTGGAACCGCACTTCCGCCTGCCGGACAGCCTTCGCGATCTCGAGCCCGCCTATCGGGAGGCGCTGC
GCAAGCGTCTCTCGCGCGGCAAGGTGGAATGTACGCTGCGTTTCGATCCGGCCCACGACGACGCCACGCTCAGCGTCAAC
GAGACGCGCCTGGCCACCCTGGCCCAGGCCCTCGGACGTGTCCGTGAGCAGGTCCCCGACGCCGCCATGCCCAACGCCCT
GGCGCTGCTCGACCACCCGGGCGTCCTGGAAAGCGACGGCGTCGATCTCGAACGCGTCCAGCAGGCCGCCCAGGCACTGT
TCGAAACCGCGCTGGACGACCTGACCGCCGGCCGTGCCCGCGAAGGCGAGCGTCTCGCGGCCTTGATTCGCGAACGGCTG
GCCGGCATCCGCGATCTGGTGGCCGAAGTTCGCGCGCACCTGCCCGCCATTCTGGACAACCAGCGCCAGCAGCTGGCCGA
CCGCCTGAACGCTTTCAAGGCCGAACTCGACCCGCAACGTCTCGAGACCGAAATCGCCCTGCTCGCCCAGAAGGCCGACG
TCGCCGAGGAGCTCGATCGTCTCGAGACGCACGTGGCCGAAGTCGAGCGTCAACTCAGGCAAAAAGGCCCCATCGGCCGC
CGCCTCGACTTCCTGATGCAGGAACTCAACCGCGAAGCCAACACCCTCTCCTCGAAGTCCATCGTCGCCGACACCACCCG
CTGCGCGGTGGAGTTGAAGGTGCTGATCGAACAGATGCGCGAGCAGATCCAGAATCTGGAGTGA

Upstream 100 bases:

>100_bases
GATCCACGCATTCTACACCCAAGCGGGCCTCACGCGGACCGGGAATCGGTTAGACTGCAGAATTGAGTGAGATTGGCCAC
ATACCGCGCAGGAGAATCGC

Downstream 100 bases:

>100_bases
ATGGCTGACGCCAGGCGACTTGCTGGCACGTCACCGACGTCGCAGCCATCGCCACGAAGCCATCACCGCAACGTAGCGGC
GCATGCGGGTGGCCTGACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MAYSMTAFTRQTQDADWGSLQLELRSVNQRYLEPHFRLPDSLRDLEPAYREALRKRLSRGKVECTLRFDPAHDDATLSVN
ETRLATLAQALGRVREQVPDAAMPNALALLDHPGVLESDGVDLERVQQAAQALFETALDDLTAGRAREGERLAALIRERL
AGIRDLVAEVRAHLPAILDNQRQQLADRLNAFKAELDPQRLETEIALLAQKADVAEELDRLETHVAEVERQLRQKGPIGR
RLDFLMQELNREANTLSSKSIVADTTRCAVELKVLIEQMREQIQNLE

Sequences:

>Translated_287_residues
MAYSMTAFTRQTQDADWGSLQLELRSVNQRYLEPHFRLPDSLRDLEPAYREALRKRLSRGKVECTLRFDPAHDDATLSVN
ETRLATLAQALGRVREQVPDAAMPNALALLDHPGVLESDGVDLERVQQAAQALFETALDDLTAGRAREGERLAALIRERL
AGIRDLVAEVRAHLPAILDNQRQQLADRLNAFKAELDPQRLETEIALLAQKADVAEELDRLETHVAEVERQLRQKGPIGR
RLDFLMQELNREANTLSSKSIVADTTRCAVELKVLIEQMREQIQNLE
>Mature_286_residues
AYSMTAFTRQTQDADWGSLQLELRSVNQRYLEPHFRLPDSLRDLEPAYREALRKRLSRGKVECTLRFDPAHDDATLSVNE
TRLATLAQALGRVREQVPDAAMPNALALLDHPGVLESDGVDLERVQQAAQALFETALDDLTAGRAREGERLAALIRERLA
GIRDLVAEVRAHLPAILDNQRQQLADRLNAFKAELDPQRLETEIALLAQKADVAEELDRLETHVAEVERQLRQKGPIGRR
LDFLMQELNREANTLSSKSIVADTTRCAVELKVLIEQMREQIQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=288, Percent_Identity=50, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32456; Mature: 32325

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSMTAFTRQTQDADWGSLQLELRSVNQRYLEPHFRLPDSLRDLEPAYREALRKRLSRG
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHCC
KVECTLRFDPAHDDATLSVNETRLATLAQALGRVREQVPDAAMPNALALLDHPGVLESDG
CEEEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCC
VDLERVQQAAQALFETALDDLTAGRAREGERLAALIRERLAGIRDLVAEVRAHLPAILDN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQQLADRLNAFKAELDPQRLETEIALLAQKADVAEELDRLETHVAEVERQLRQKGPIGR
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RLDFLMQELNREANTLSSKSIVADTTRCAVELKVLIEQMREQIQNLE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AYSMTAFTRQTQDADWGSLQLELRSVNQRYLEPHFRLPDSLRDLEPAYREALRKRLSRG
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHCC
KVECTLRFDPAHDDATLSVNETRLATLAQALGRVREQVPDAAMPNALALLDHPGVLESDG
CEEEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCC
VDLERVQQAAQALFETALDDLTAGRAREGERLAALIRERLAGIRDLVAEVRAHLPAILDN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQQLADRLNAFKAELDPQRLETEIALLAQKADVAEELDRLETHVAEVERQLRQKGPIGR
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RLDFLMQELNREANTLSSKSIVADTTRCAVELKVLIEQMREQIQNLE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]