| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
Click here to switch to the map view.
The map label for this gene is 92115313
Identifier: 92115313
GI number: 92115313
Start: 3564980
End: 3566482
Strand: Direct
Name: 92115313
Synonym: Csal_3198
Alternate gene names: NA
Gene position: 3564980-3566482 (Clockwise)
Preceding gene: 92115312
Following gene: 92115320
Centisome position: 96.44
GC content: 54.69
Gene sequence:
>1503_bases ATGGATTTCTTCTCACACCTCATAACGGGGTTTGGCACCGCGCTATCCCCCATGAACTTGCTCTATTGCTTCATCGGGGT CTTGCTCGGAACGGTCATTGGCCTGCTCCCTGGATTAGGCTCAGCCACCGGCGTCGCGTTGCTATTACCCCTAACGCTCA CTCTCAGCCCGATCACTGCGCTTATCATGCTCGCGGGTATCTACTATGGAGCCCAGTATGGCGCGACGATCACCTCGGTC TTAATTGCAACGCCAGGCGACTCGGCCAGCGTCGTCACCGCCATCGACGGCTATCCGATGGCTCGACAAGGCAGGGCCGG ACCAGCCTTGGCCATCGGTGCGGTCTCAAGCTTTGTGTCGGGCATCACCAGCTTGATTCTCCTCATGGCGTTAGCGCCAG TCTTTGCCTCGCTGGCGCTGCATTTCGGGCCACCCGAAATCTGCGCACTGATCGTTCTTGGCTTCACAAGCATCGTCGGC TTCAGTGGCACGTCGAGAATCAAAGGGTTGGCCATGGCCACTTTCGGCGTTGCTATCACCACTATTGGCCTCGATCCTCA AAGCGGCAGCACACGTTTTACCTTCGGCTTCATTAACCTTTTCGGGGGTATCGGTTTCTTGCCAGTCGTGATTGGCCTGT TCGCGGTTGCCGAAGTACTGCATCAAGTCCGTAGCGGCAAAGTTGAGCCAATACGTACACGGTTTCGCGATATGATCCTG AAGCGGGAGGACTGGCGGAGATATCGGACCACAATATTCAGTAGTGGGTTACTTGGCTTTTTCATCGGAGTGCTCCCGGG CGCCGGGGCCACACTCGCTTCTTTTCTAGGTTACGATCTGGCACGCCACTTCTCTAAGCACAAAAGCGAATTCGGCAAGG GAGCGATAGAGGGAGTGGCCGCACCGGAGGCCGCGAACAGCGCAGCCGTCAATGGCTCCTTCGTCCCAACCCTTACCTTG GGTATTCCCGGGTCGGGTACCACCGCAGTGCTCCTTGGCGCCTTCATTGTGTTCGGCATTCAGCCTGGCCCCTTACTTTT CACCAACGAGCCTGATCTGGTCTGGGGGTTGATGGCCTCATTTTTTATCGGCAGTGTAATTTTGCTGTTGCTAAACCTGC CTCTAGTCCCCCTATTTGCCTCGATCCTGCGTTTCCGTTATGAACTGATCTACCCTTGTATCTTGTTCCTTTCCTTCATC GGCGCTTACGCCATTGAAAACCGTATGTGGGGAGTCTGGCTAGCACTGGCTTTCGGAATAATCGGTTATTTCATGAAGCG CTATGACTATCCCACTGCGCCTTTGATACTCGGCATCGTTCTTGGCGGGATGTTCGAGAAGACGCTAATCCAGACTTCTT CCATGGGAGGCGGCGACCTGACGATCTTCCTTGACCGCCCAATCGCCATGATACTTTTCGCGTTAGCCGCGCTCATTCTT TATGGCCCGCGATTATCAAAAGCATATAGAAAAATACGGAAACTGAGCGCCAAAAAAGCCTGA
Upstream 100 bases:
>100_bases CAGCTTGGGTATAGGCCTGCTCGCGTGGCTGATCTTTTACCAATTCATGGGGATCCGTTTACCCCTCGGCATCAGTGCCC CGCTGCTTGGAGGCTGAATA
Downstream 100 bases:
>100_bases AAACAACTCAAAAAACAGGCCACCCTGCTTTTTAAAAGGTGGCCTGCACACACCAACGAGATGCATCATGACATACTCTT GGGCTCCGCCATATCAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MDFFSHLITGFGTALSPMNLLYCFIGVLLGTVIGLLPGLGSATGVALLLPLTLTLSPITALIMLAGIYYGAQYGATITSV LIATPGDSASVVTAIDGYPMARQGRAGPALAIGAVSSFVSGITSLILLMALAPVFASLALHFGPPEICALIVLGFTSIVG FSGTSRIKGLAMATFGVAITTIGLDPQSGSTRFTFGFINLFGGIGFLPVVIGLFAVAEVLHQVRSGKVEPIRTRFRDMIL KREDWRRYRTTIFSSGLLGFFIGVLPGAGATLASFLGYDLARHFSKHKSEFGKGAIEGVAAPEAANSAAVNGSFVPTLTL GIPGSGTTAVLLGAFIVFGIQPGPLLFTNEPDLVWGLMASFFIGSVILLLLNLPLVPLFASILRFRYELIYPCILFLSFI GAYAIENRMWGVWLALAFGIIGYFMKRYDYPTAPLILGIVLGGMFEKTLIQTSSMGGGDLTIFLDRPIAMILFALAALIL YGPRLSKAYRKIRKLSAKKA
Sequences:
>Translated_500_residues MDFFSHLITGFGTALSPMNLLYCFIGVLLGTVIGLLPGLGSATGVALLLPLTLTLSPITALIMLAGIYYGAQYGATITSV LIATPGDSASVVTAIDGYPMARQGRAGPALAIGAVSSFVSGITSLILLMALAPVFASLALHFGPPEICALIVLGFTSIVG FSGTSRIKGLAMATFGVAITTIGLDPQSGSTRFTFGFINLFGGIGFLPVVIGLFAVAEVLHQVRSGKVEPIRTRFRDMIL KREDWRRYRTTIFSSGLLGFFIGVLPGAGATLASFLGYDLARHFSKHKSEFGKGAIEGVAAPEAANSAAVNGSFVPTLTL GIPGSGTTAVLLGAFIVFGIQPGPLLFTNEPDLVWGLMASFFIGSVILLLLNLPLVPLFASILRFRYELIYPCILFLSFI GAYAIENRMWGVWLALAFGIIGYFMKRYDYPTAPLILGIVLGGMFEKTLIQTSSMGGGDLTIFLDRPIAMILFALAALIL YGPRLSKAYRKIRKLSAKKA >Mature_500_residues MDFFSHLITGFGTALSPMNLLYCFIGVLLGTVIGLLPGLGSATGVALLLPLTLTLSPITALIMLAGIYYGAQYGATITSV LIATPGDSASVVTAIDGYPMARQGRAGPALAIGAVSSFVSGITSLILLMALAPVFASLALHFGPPEICALIVLGFTSIVG FSGTSRIKGLAMATFGVAITTIGLDPQSGSTRFTFGFINLFGGIGFLPVVIGLFAVAEVLHQVRSGKVEPIRTRFRDMIL KREDWRRYRTTIFSSGLLGFFIGVLPGAGATLASFLGYDLARHFSKHKSEFGKGAIEGVAAPEAANSAAVNGSFVPTLTL GIPGSGTTAVLLGAFIVFGIQPGPLLFTNEPDLVWGLMASFFIGSVILLLLNLPLVPLFASILRFRYELIYPCILFLSFI GAYAIENRMWGVWLALAFGIIGYFMKRYDYPTAPLILGIVLGGMFEKTLIQTSSMGGGDLTIFLDRPIAMILFALAALIL YGPRLSKAYRKIRKLSAKKA
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52983; Mature: 52983
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFFSHLITGFGTALSPMNLLYCFIGVLLGTVIGLLPGLGSATGVALLLPLTLTLSPITA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LIMLAGIYYGAQYGATITSVLIATPGDSASVVTAIDGYPMARQGRAGPALAIGAVSSFVS HHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH GITSLILLMALAPVFASLALHFGPPEICALIVLGFTSIVGFSGTSRIKGLAMATFGVAIT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHE TIGLDPQSGSTRFTFGFINLFGGIGFLPVVIGLFAVAEVLHQVRSGKVEPIRTRFRDMIL EECCCCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KREDWRRYRTTIFSSGLLGFFIGVLPGAGATLASFLGYDLARHFSKHKSEFGKGAIEGVA HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC APEAANSAAVNGSFVPTLTLGIPGSGTTAVLLGAFIVFGIQPGPLLFTNEPDLVWGLMAS CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHH FFIGSVILLLLNLPLVPLFASILRFRYELIYPCILFLSFIGAYAIENRMWGVWLALAFGI HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGYFMKRYDYPTAPLILGIVLGGMFEKTLIQTSSMGGGDLTIFLDRPIAMILFALAALIL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHH YGPRLSKAYRKIRKLSAKKA HCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDFFSHLITGFGTALSPMNLLYCFIGVLLGTVIGLLPGLGSATGVALLLPLTLTLSPITA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LIMLAGIYYGAQYGATITSVLIATPGDSASVVTAIDGYPMARQGRAGPALAIGAVSSFVS HHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH GITSLILLMALAPVFASLALHFGPPEICALIVLGFTSIVGFSGTSRIKGLAMATFGVAIT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHE TIGLDPQSGSTRFTFGFINLFGGIGFLPVVIGLFAVAEVLHQVRSGKVEPIRTRFRDMIL EECCCCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KREDWRRYRTTIFSSGLLGFFIGVLPGAGATLASFLGYDLARHFSKHKSEFGKGAIEGVA HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC APEAANSAAVNGSFVPTLTLGIPGSGTTAVLLGAFIVFGIQPGPLLFTNEPDLVWGLMAS CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHH FFIGSVILLLLNLPLVPLFASILRFRYELIYPCILFLSFIGAYAIENRMWGVWLALAFGI HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGYFMKRYDYPTAPLILGIVLGGMFEKTLIQTSSMGGGDLTIFLDRPIAMILFALAALIL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHH YGPRLSKAYRKIRKLSAKKA HCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]