| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92115311
Identifier: 92115311
GI number: 92115311
Start: 3563447
End: 3564451
Strand: Direct
Name: 92115311
Synonym: Csal_3196
Alternate gene names: NA
Gene position: 3563447-3564451 (Clockwise)
Preceding gene: 92115310
Following gene: 92115312
Centisome position: 96.4
GC content: 54.23
Gene sequence:
>1005_bases ATGACTATCACAACAAAACGCAACAGTTTTCTACAGATCGGCGGTACCATGGCAGTAGCCTTTGCATTGGGTTCCGCAAC ATTCGCAAGCTCTGCCCAGGCCGAAGAGTCCTCTTGGTCTCCTTCGCAGAACGTATCGATGGTGGTGCCTTTTAAACCAG GCGGTGGTAGCGACACGTTCGGCCGCGCAGCTACATCAGGAATCAAGGAGGTCAGGGAAGATGTCGAGATCTCCGTCAAT AATATTGTAGGTGGTTCAGGAGCCATCGGTTACTCAACACTCTTGCAACGAGATGGCAACCCCCACTACCTGCTCGCCTC GGAGACAGGGGCAGCCATCATCCTGCCCCTCATGAACGACGTCCCGTACAGCTGGGACAAGCTAACGCCAATTGCTGAAG CTGCCGAAGATCACACAATGATCATCGTCGCCAATGATTCTCCGCATGAATCCATTAGCGACCTGGTAGATGCGGCAAAG CAAGGCCAAGTGAACATCGCTATCTCAGGCAAGGGGAGCCCAGCATCACTAGCCTTCCAACTGATTGAACAGAACCAGGA CGTAACGTTCAACCGCGTCGTCTTCGAATCAGGATCGGCCAACAACGCAGCTCTACTCGGCGGTGATGTCGCCGCCGCCG GCGCCAACCCCGGTGAGGCTATCGAACTCATCAAGGCCGATAAAGTCCGCGCCCTGACTATCTTCAAGGAGGAACGTTTC GACCAAGGCCCCTTGGCCGAAGTGCCGACAATCGCCGAAGCGGGAATCGATGTCGATGTCACACCCACCCTGCAATTCCG TGGAATACTCGCTTCTCCCGGTCTCAGCGAGGCACAAAAAACCTATTGGGAAAACGCCGTCAAGTCGTGGTCTGAAACCG AGGGCTACAAGACTTACATCGAAAACAATTACCTAACCCCCAAGGTCCGCACCGGTGAAGAATTCGCCGCTTTCCTCGAA AAACAACATAACACTATTGCCCCGCTCCTGACTGAAACGGACTGA
Upstream 100 bases:
>100_bases TCGACGGCAATATTCATTCTTTGATCAGTAGAGGAGGCAGTCAACGCTTTACGCTCACAAGAACAATCGCTCAGCTCACA GACATATCGGGAGAACTACC
Downstream 100 bases:
>100_bases GAGGTAATCACCATGAAACCGAGAGGAGACTATGTGGGAGCGCTGATCCTCGTCGCAGTGGGAGCGGCGTTCTCCACCCT CTCGGTCGATTACGGCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTITTKRNSFLQIGGTMAVAFALGSATFASSAQAEESSWSPSQNVSMVVPFKPGGGSDTFGRAATSGIKEVREDVEISVN NIVGGSGAIGYSTLLQRDGNPHYLLASETGAAIILPLMNDVPYSWDKLTPIAEAAEDHTMIIVANDSPHESISDLVDAAK QGQVNIAISGKGSPASLAFQLIEQNQDVTFNRVVFESGSANNAALLGGDVAAAGANPGEAIELIKADKVRALTIFKEERF DQGPLAEVPTIAEAGIDVDVTPTLQFRGILASPGLSEAQKTYWENAVKSWSETEGYKTYIENNYLTPKVRTGEEFAAFLE KQHNTIAPLLTETD
Sequences:
>Translated_334_residues MTITTKRNSFLQIGGTMAVAFALGSATFASSAQAEESSWSPSQNVSMVVPFKPGGGSDTFGRAATSGIKEVREDVEISVN NIVGGSGAIGYSTLLQRDGNPHYLLASETGAAIILPLMNDVPYSWDKLTPIAEAAEDHTMIIVANDSPHESISDLVDAAK QGQVNIAISGKGSPASLAFQLIEQNQDVTFNRVVFESGSANNAALLGGDVAAAGANPGEAIELIKADKVRALTIFKEERF DQGPLAEVPTIAEAGIDVDVTPTLQFRGILASPGLSEAQKTYWENAVKSWSETEGYKTYIENNYLTPKVRTGEEFAAFLE KQHNTIAPLLTETD >Mature_333_residues TITTKRNSFLQIGGTMAVAFALGSATFASSAQAEESSWSPSQNVSMVVPFKPGGGSDTFGRAATSGIKEVREDVEISVNN IVGGSGAIGYSTLLQRDGNPHYLLASETGAAIILPLMNDVPYSWDKLTPIAEAAEDHTMIIVANDSPHESISDLVDAAKQ GQVNIAISGKGSPASLAFQLIEQNQDVTFNRVVFESGSANNAALLGGDVAAAGANPGEAIELIKADKVRALTIFKEERFD QGPLAEVPTIAEAGIDVDVTPTLQFRGILASPGLSEAQKTYWENAVKSWSETEGYKTYIENNYLTPKVRTGEEFAAFLEK QHNTIAPLLTETD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35457; Mature: 35326
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITTKRNSFLQIGGTMAVAFALGSATFASSAQAEESSWSPSQNVSMVVPFKPGGGSDTF CEEECCCCCEEEECCCEEEEHHHCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCH GRAATSGIKEVREDVEISVNNIVGGSGAIGYSTLLQRDGNPHYLLASETGAAIILPLMND HHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCEEEEEECCC VPYSWDKLTPIAEAAEDHTMIIVANDSPHESISDLVDAAKQGQVNIAISGKGSPASLAFQ CCCCCHHCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH LIEQNQDVTFNRVVFESGSANNAALLGGDVAAAGANPGEAIELIKADKVRALTIFKEERF HHHCCCCCEEEEEEEECCCCCCEEEECCCEEECCCCCCHHEEEEECCCEEEEEEEEHHCC DQGPLAEVPTIAEAGIDVDVTPTLQFRGILASPGLSEAQKTYWENAVKSWSETEGYKTYI CCCCCCCCCCHHHCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCHHHCCCCEEEE ENNYLTPKVRTGEEFAAFLEKQHNTIAPLLTETD CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCC >Mature Secondary Structure TITTKRNSFLQIGGTMAVAFALGSATFASSAQAEESSWSPSQNVSMVVPFKPGGGSDTF EEECCCCCEEEECCCEEEEHHHCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCH GRAATSGIKEVREDVEISVNNIVGGSGAIGYSTLLQRDGNPHYLLASETGAAIILPLMND HHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCEEEEEECCC VPYSWDKLTPIAEAAEDHTMIIVANDSPHESISDLVDAAKQGQVNIAISGKGSPASLAFQ CCCCCHHCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH LIEQNQDVTFNRVVFESGSANNAALLGGDVAAAGANPGEAIELIKADKVRALTIFKEERF HHHCCCCCEEEEEEEECCCCCCEEEECCCEEECCCCCCHHEEEEECCCEEEEEEEEHHCC DQGPLAEVPTIAEAGIDVDVTPTLQFRGILASPGLSEAQKTYWENAVKSWSETEGYKTYI CCCCCCCCCCHHHCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCHHHCCCCEEEE ENNYLTPKVRTGEEFAAFLEKQHNTIAPLLTETD CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9583950; 12910271 [H]